Micropterus salmoides (largemouth bass): 119906871
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Entry
119906871 CDS
T07309
Symbol
thrb
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04080
Neuroactive ligand-receptor interaction
msam04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119906871 (thrb)
04081 Hormone signaling
119906871 (thrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119906871 (thrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
msam03310
]
119906871 (thrb)
Transcription factors [BR:
msam03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
119906871 (thrb)
Nuclear receptors [BR:
msam03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
119906871 (thrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
CpXC
Motif
Other DBs
NCBI-GeneID:
119906871
NCBI-ProteinID:
XP_038580227
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MSEPAEKCSPRWKDEAIQNGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTI
QKNLNPTYACKYEAKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDNSKRLAKRKLIEEN
RERRRKEELQKTVWDRLEPTQEEWDLIRMVTEAHMATNAQGNHWKQKRKFLVEEAMLLNE
ITCNLFYTSDQSAAGVKETKPEDIGQASMVNTPEGNKVDIEAFTQFTKIITPAITRVVDF
AKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGL
GVVSDAIFDLGVSLSSFNLDDSEVALLQAVILLSSDRPGLSSVEKIERCQEEFLLAFEHY
INYRKHKVAHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagccagcagaaaaatgctccccccgctggaaagatgaggccattcaaaatggg
tacattccaagttacctggacaaggatgagctatgtgtagtatgcggggacaaagccaca
ggctatcactatcgctgcattacctgtgaaggttgcaagggtttcttcaggcggacgatc
cagaagaatctcaaccctacctacgcctgtaagtatgaggcgaaatgcgtcatcgacaaa
gtgaccagaaaccagtgccaggaatgtcgcttcaagaagtgcattgcagtgggaatggcg
accgacttggtattggacaacagcaaaaggctggccaagcggaaactaatcgaggagaac
cgggagcgccgtcggaaggaggaactgcagaaaactgtgtgggaccgactggagcccacc
caggaggagtgggacctcatccgtatggtgactgaggcccacatggccacgaacgcgcag
ggcaaccactggaagcagaagcggaaattcctggtcgaggaagctatgcttcttaatgaa
ataacatgtaatttattctatacttctgaccagagtgcagcaggggtgaaggaaactaag
cctgaggatattggtcaagcgtccatggtcaatacacctgaagggaacaaagtggatata
gaagccttcacacagtttacaaaaattatcacccctgccataacccgagtggtggacttt
gccaaaaaattgcctatgttttgtgagctgccttgtgaagaccagatcatcctgttgaaa
ggctgttgcatggagatcatgtcactgcgagctgctgtgcgctatgatccagagagtgag
accctcacgctcaacggcgagatggcggtcacgcggggtcagcttaagaatggaggcttg
ggcgtagtctcagacgccatctttgaccttggtgtgtcgctgtcctcctttaacttggat
gactctgaggtggctctcctacaggcagtcatcctgctttcatctgatcggccgggcctg
agtagtgtggagaaaattgaacgctgccaagaggagttcctgctggcctttgaacattac
atcaactaccgcaaacacaaagtggcacatttctggcccaagctgctaatgaaggtgacg
gacctgcgcatgatcggcgcctgccacgccagccgattccttcacatgaaagtggagtgt
cccaccgagctattccctcctctcttcctggaggtcttcgaggactga
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