Micropterus salmoides (largemouth bass): 119906883
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Entry
119906883 CDS
T07309
Name
(RefSeq) toll-like receptor 13 isoform X1
KO
K18808
toll-like receptor 13
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
msam04054
]
119906883
Pattern recognition receptors [BR:
msam04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
119906883
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_9
LRR_5
TIR
TIR_2
LRR_1
LRR_LRWD1
LRR_At5g56370
LRR_EndoS
LRR_6
ThsB_TIR
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
119906883
NCBI-ProteinID:
XP_038580249
LinkDB
All DBs
Position
Unknown
AA seq
996 aa
AA seq
DB search
MKSCCATCCVVLSRCSPLNNINSNKSPPDSNSTIKPAVVLKISMSAYLIQRRLLLLLCLL
LHLNSSLAYSLKGCVISYSEDASADVSLDCSGRELVTVPDDIPRDASSVKLSNNQLEQIN
RQDFGHLSKLRILSLDSNQIAHVDDGSFTNLVALTNLYMNENKLTRLTGNIFQGLSNLTT
LDLGGNNIQFIHSSAFQFLSSLQTVILENNKLQQVTDIQPILQLPHLQELNIGGNLFTSF
QTKDLLLNRSSGLKVLNVSDNAKLEKFSITTQIFPHLEMIDLSGSGQAAGLKWDIPDKTL
LRNITQLDFSGTLIPFEEIQKVLQSLDSLMHLRLNYMETSIQKGLLATVCKIPTLRRLDV
SYNSVPKLSSKLVTCSQLNELDLSNTNTSELPKGSGRLMKRLRSLILDANGLTKVPDDIR
SLSSLEVLRLSANRISELACEDFINTTRLTELHLDKNRIAKLDRCVFENLNDLKVLDMSN
NLVCTFGGAFKTGLQKLEFLDLNQNYIATLEKGDFKGLGSLKYLDLELSNIGLVKAQPFQ
GLNSLRTLKVSLPLEFENKFRGLQQLENLTVYFDIDSSFKSPHSNFYKALFHLKSLKVLT
MMCLGEHAGFPFDIPQTVLASMRHLEDLTAENLYISAPDPDTFRNNPQLKHLTLSQNDLS
DLGPELFQPIPNLQALDLSYSKLKSLDFLAQADLSALTFLKLSDNDITVINETVFQSLPA
LTYLDLDNNPFTCDCSNAGFIQWVKNNNQTQVVNAHMYTCSFPVVEQGNKLLDFDIQSCW
MDVGFLCFICSTCLTLLTLLAAFVFHFLRWQLAYAYYLFLAFLYDSRKKKKNRAPHQYDA
FISYNVHDEAWVYREMLPVLEGEQGWRLCLHHRDFQPGKPIMDNITDAIYGSRKTICVIS
QRYLQSEWCSREIQMASFRLFDEHKDVLILLFLEEIPAQQLSPYYRMRKLVKGRTYLSWP
QAGQHKGVFWQNVSRALETGDAPTETADLLTGPAGC
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcatgttgtgcaacgtgttgtgttgtcctctccagatgttcacccctgaacaac
attaacagcaacaaatctccacctgacagtaactcaacaatcaaaccagccgtggtccta
aagatcagcatgtcagcatacttaatacagagacgtcttctcttgcttttgtgtctcctg
cttcatcttaactcttcactggcttattcactgaaaggctgcgtcatcagttattctgaa
gacgcctcggctgatgtttctttggactgctcaggtcgtgaacttgttactgtccctgat
gacatccccagagatgcaagctcagtaaaactctccaacaatcagcttgaacagattaac
aggcaagattttggccacttgtcaaagctgagaattttgtccctagactcaaatcagatt
gctcatgtagacgatggatctttcactaatttggtggcactgacaaacctctacatgaat
gaaaacaaactcaccaggctgacaggcaacatctttcagggactgtccaacctcaccacg
cttgacctcggaggaaacaacattcagttcattcattcctcggccttccagttcctgtcc
agcttacagactgtgattctagaaaacaacaagctccaacaagtcactgacattcagccc
atcttacagctaccacacctacaggagctgaacattggaggaaatctatttacctccttt
cagaccaaagatctgctgctgaacaggtcctcaggactgaaggtgttaaatgtttctgat
aatgctaagttagaaaagttcagcatcacaacacagatctttcctcaccttgagatgata
gacctttctggaagtggccaagctgctggcttgaaatgggacatacctgacaagacttta
ctaaggaacataactcagctggatttcagcggcactttgattccttttgaagagatccaa
aaagtcctgcagagtcttgactcactgatgcatctgaggctgaattatatggagacgtct
atccagaaaggtctcttagctacagtgtgcaaaataccgacactaaggaggctggatgtg
tcttacaacagtgttcccaaattaagttcaaaacttgtaacttgctctcagcttaatgag
ctcgacttgtccaacactaacacgagtgaactgcctaaaggctcagggcgattgatgaag
agactgaggtccctaattctagacgccaacggtctcaccaaagtgccagatgacattaga
agtctctcctccctcgaggttctacgtcttagtgccaatcgtatctctgagttggcatgt
gaggatttcataaacacaacgcgacttacagagctgcatctggacaaaaaccgcattgcc
aaactggacaggtgtgtctttgaaaatcttaatgatctgaaggttttagatatgagtaac
aacttggtgtgtacatttggaggtgccttcaaaacaggactgcagaagcttgagttcttg
gatttgaaccaaaactatatagctactcttgaaaagggggattttaaaggtttaggttcc
ctaaaatatttggatctggaattatcaaatattggattggtgaaagctcagccttttcaa
ggactaaacagtctcagaactcttaaagtgtctcttccacttgagtttgaaaataaattc
agaggtttacaacaattggaaaatctcacagtctactttgatattgacagcagttttaaa
agtcctcattcaaacttctataaagctttgttccatttaaaatctttgaaagttttgaca
atgatgtgcttgggtgaacacgctggcttcccctttgatataccacagacagttctggcg
tctatgagacatttagaggaccttacagctgagaatttatatatttccgctccagatcct
gacacatttagaaacaatccccagctcaagcatctgacactcagtcagaatgatttgtca
gatttgggtcctgaactgtttcagccaatcccaaacctgcaggctctcgatctctcttac
agtaagctcaaatctttggattttctggcccaggccgacctgtctgcactcacattttta
aaactgagtgacaatgacattacagtgatcaacgagacggtcttccagtctctccctgca
ctcacatatctggacctggacaataatcctttcacctgtgactgctctaacgccggcttt
atccaatgggtgaagaacaacaaccaaactcaggttgttaacgcccatatgtacacctgt
tcctttcctgtggtggagcaaggaaacaagttgctggactttgacatccagtcctgttgg
atggacgtcggcttcctctgcttcatttgcagcacttgtctgactttgctaactcttctc
gctgccttcgtcttccactttctgaggtggcagctagcctacgcatactacctcttcctg
gccttcctctatgatagcaggaagaagaagaagaacagagctcctcaccaatacgacgcc
ttcatctcctacaacgttcacgacgaggcctgggtttacagagagatgcttccagtgctg
gaaggagagcagggctggaggctctgcctgcaccacagagacttccaaccagggaagccc
atcatggacaacatcacagacgccatctatggcagcaggaagaccatctgtgtgatcagc
cagcgctacctgcagagcgagtggtgctccagagagatccagatggccagcttccgcctg
tttgacgagcacaaggacgttctgatcctgctgtttctggaggagatcccggcccagcag
ctgtctccgtactaccgcatgaggaagctggtgaagggacgcacctacctgagctggccg
caggccggccaacacaaaggagtcttctggcagaacgtcagcagagctctggagaccggg
gacgctcccacagagaccgcagacctcctgactggaccggcaggatgctga
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