Micropterus salmoides (largemouth bass): 119907067
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Entry
119907067 CDS
T07309
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03250
Viral life cycle - HIV-1
msam03272
Virion - Hepatitis viruses
msam04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119907067
03272 Virion - Hepatitis viruses
119907067
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119907067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119907067
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msam04147
]
119907067
Membrane trafficking [BR:
msam04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
119907067
Exosome [BR:
msam04147
]
Exosomal proteins
Proteins found in most exosomes
119907067
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
DUF2226
COG3_N
Motif
Other DBs
NCBI-GeneID:
119907067
NCBI-ProteinID:
XP_038580556
LinkDB
All DBs
Position
Unknown
AA seq
877 aa
AA seq
DB search
MATFISVPLKKASEVDLVKPLSKFVTTTYPAGEEQGEYIRAVEELNKLRKNALGRPLDKH
ESSLEILLRYYDQLCAVEAKFPFSENQLCLTFTWKDAFDKGSLFGGSVKLALASLGYEKT
CVLFNAAALASQIATEQNLDNDEGLKAAAKYYQLASGAFGHIKDTVLSALNREPTMDISP
ETVGTLSIIMLAQAQEVFFLKATSDKMKDAVIAKLANQAADFYGDAFKQCQYKDNLPKYF
YFQEVLPVLAAKHCILQANAELHQSILAKQKKRFGEEIARLQHAAELVKTVASRYDEYVS
VKDLTEKINRALTAAKKDNDFIYHDRVPEVKDLEHIGKAALVKATSITPPLSQKFTDLFE
KMVPMAVQHSMSIYNQRKAETVNRLVGTMREATNLCNGVLASLNLPAALEDLSGDSIPQS
IAEKARSIVQQGGLQSIEQLIKDLPELLTRNREILDESLKMLDDEETTDNELRTKFNQRW
NRTPSGDLYKPLRAEGANFRNILDKAVQADQVVKDRYNTHCEMITLLCKPENELNAAIPS
ANPTRTLQGSEVVNVLRSQLAQLDELKKERETMEGEIKGVTFDMSTAFLTALAQDGAINE
EQLSLSQLDQLYGAYNQRVQASLRTQEELLGKVQTSHQEFSSLKQSNTEANQREEVLKKL
ASAHDSYVEISSNLREGTKFYNDLTEILLKFQNKCSDIVFARKTERDELLKELQQSIARE
PSAPSFNVPAYQSNPAPPAAGPTPAPRTVFQPQQAQQQPEAKPQPPARPPPPSFTPQAAS
TAPTNVPPTGPPNTNPPPVAPASQAQGPPYPTYQGYPGYFQMPMGYNPYAYGQYNMPYMP
YQASPGQGGYPGAPPAGQPYHGYPQQPPQQQPYYPQQ
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtttatttcagtcccgttaaaaaaggcatcagaagtggatctggtgaaaccg
ctgtctaagtttgtaaccaccacgtacccagcgggcgaggagcagggagagtatatccgc
gcggtggaggagttgaacaagctccgtaagaacgcgctgggaaggccgctggacaaacac
gagagctccctggagatcctgctcagatactatgatcagctgtgtgctgtcgaggctaag
tttcccttctctgaaaaccagctctgcttaaccttcacatggaaggatgcctttgataaa
gggtcgctgttcggtggctcagtgaagctcgcattggccagtttgggctatgagaagaca
tgtgtgttgttcaacgcagcagcgctggccagtcagatcgccacagagcaaaacctggac
aacgatgaggggctgaaggctgcagccaaatactaccagctggccagcggagcgtttggc
cacatcaaggacacagtgctgtcagcgctaaacagggagcccaccatggacatctccccc
gagactgtgggtaccctgagcattatcatgctggcccaggcccaggaggtcttcttcctt
aaagccacctcagataagatgaaagatgctgtcattgcaaagctggccaatcaggcagca
gatttctacggcgatgccttcaagcagtgccagtacaaagacaaccttcccaagtatttt
tattttcaggaagtgctgcctgtgctggcggccaagcactgcatcttgcaagccaacgct
gagctgcaccagagcatcctggccaagcagaagaaacgctttggagaggagatcgctcgc
ctgcagcatgcagcagagctggtgaagacggtggcgtctcgctacgacgaatatgtgagc
gttaaggacctgaccgagaagatcaaccgagccctcaccgcagccaaaaaagacaatgac
tttatctaccacgaccgtgtgcctgaggtcaaggatctggagcacattggcaaggcagcg
ctggtcaaagccacctccatcactcctccactcagccagaaattcacagacttgtttgag
aaaatggtccccatggcggtgcagcactccatgagcatttacaaccagaggaaggctgag
accgttaacagactggtgggaacaatgagggaggccaccaatctctgcaacggggtgttg
gcatcactaaacctgccagctgctctggaggatctgtcaggagactctattccacaatcc
attgctgagaaggcgcgatccatcgtgcaacagggaggcctgcagagcatcgaacagcta
atcaaagacctgcctgagcttctgacccgcaacagagagatcctggacgagtctctgaag
atgctggatgatgaagagacgacagacaacgagctgagaaccaagttcaaccagcgttgg
aacagaaccccttctggagacctttacaagccccttcgtgcagagggagctaatttccgc
aacatcttggacaaggccgtccaggcggaccaggtcgtgaaggaccgctacaacacccac
tgtgaaatgatcaccctgctgtgtaaaccggagaatgagctcaatgctgccattccctcc
gccaacccgaccaggacactgcaaggcagcgaggtggtcaacgtgctgcgctcccagctg
gctcagctggacgagttgaagaaagagagggagaccatggagggagagatcaagggtgtg
acctttgacatgtccactgccttcctgacggcgctcgcccaggacggggccatcaatgag
gagcagctgtcactctcccagctcgaccagttgtacggcgcctacaaccagagggtacag
gccagcctccgcacccaagaagagctgctgggaaaagttcagacttcccaccaggagttt
agcagtctgaaacagtccaacacggaggccaaccagagggaggaggtcctgaagaagctg
gcttcggcacatgacagctacgttgagatcagcagcaacctgcgcgaaggcaccaagttc
tacaatgacttgacagaaatcctgctcaagttccagaacaaatgcagcgacatcgttttc
gctcgcaagacagagcgggatgaactacttaaggagctgcagcagagcattgcccgagag
cccagtgctccatccttcaacgttcctgcctatcagagcaacccagctccccctgctgcc
ggcccaacccctgcacctaggaccgtctttcagcctcaacaagcccagcagcagcccgag
gcaaagccccagcccccagccaggcctcctccaccgagcttcacccctcaggcagcctcc
accgctcccaccaatgtaccacccactggccctcccaacaccaacccaccacctgtggcc
ccagcatcccaggcccagggaccaccttaccctacttaccagggctatccagggtacttc
cagatgcctatgggctacaatccttatgcttacggccagtacaacatgccctacatgccc
taccaggcgtctccaggacagggaggctacccaggagcccctcctgccggacagccctac
catggctacccccagcaaccccctcagcagcagccctactaccctcagcaataa
DBGET
integrated database retrieval system
