KEGG   Micropterus salmoides (largemouth bass): 119907146
Entry
119907146         CDS       T07309                                 
Symbol
rpa3
Name
(RefSeq) replication protein A 14 kDa subunit
  KO
K10740  replication factor A3
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03030  DNA replication
msam03420  Nucleotide excision repair
msam03430  Mismatch repair
msam03440  Homologous recombination
msam03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    119907146 (rpa3)
   03420 Nucleotide excision repair
    119907146 (rpa3)
   03430 Mismatch repair
    119907146 (rpa3)
   03440 Homologous recombination
    119907146 (rpa3)
   03460 Fanconi anemia pathway
    119907146 (rpa3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msam03032]
    119907146 (rpa3)
   03400 DNA repair and recombination proteins [BR:msam03400]
    119907146 (rpa3)
DNA replication proteins [BR:msam03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    119907146 (rpa3)
DNA repair and recombination proteins [BR:msam03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     119907146 (rpa3)
   MMR (mismatch excision repair)
     119907146 (rpa3)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     119907146 (rpa3)
SSDB
Motif
Pfam: Rep_fac-A_3 NMD3
Other DBs
NCBI-GeneID: 119907146
NCBI-ProteinID: XP_038580698
LinkDB
Position
Unknown
AA seq 122 aa
MATILDVPKPRINCSLLSQHISRPVCFVGRVEKVHPTGKSFTVSDGEGKIATVELNEPLE
EELSGVVEVIGMVSNKGAIMATTYNMLREDKGIPFDLELYNEALKVVHDFPQHYPFEVAA
SG
NT seq 369 nt   +upstreamnt  +downstreamnt
atggcgaccatactggacgttcccaaaccgagaataaactgctctttgctgtcgcagcac
ataagcagaccggtctgcttcgtagggcgtgttgaaaaggtacatccaacaggaaagtcg
ttcaccgtctcggatggagaaggaaagattgcaacagttgaactaaacgagcctcttgaa
gaagagctgagcggcgttgtggaggtcattggtatggtgtccaacaagggggcaataatg
gccaccacatacaacatgctacgagaggacaagggcattccttttgatttagagctgtat
aatgaagccctgaaggtcgtccatgatttcccccagcactacccttttgaagtggctgca
agtggatga

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