Micropterus salmoides (largemouth bass): 119907206
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Entry
119907206 CDS
T07309
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119907206 (trim71)
04121 Ubiquitin system [BR:
msam04121
]
119907206 (trim71)
Enzymes [BR:
msam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119907206 (trim71)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119907206 (trim71)
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119907206 (trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
ANCHR-like_BBOX
SGL
TEN_NHL
zf-RING_5
zf-C3HC4
zf-RING_2
Ig_GEX2_N
Invasin_D3
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
119907206
NCBI-ProteinID:
XP_038580831
LinkDB
All DBs
Position
Unknown
AA seq
830 aa
AA seq
DB search
MASFPDSDLQTCPLCKELCGSSAPISSSSSTSSSSSHTSSSSSQTTRRLHVLPCLHAFCR
QCLEGQRSPGDPLKLRCPTCDQKVSISEAGVDSLPSSNFLFSNLLDVVVSSEEQIQNKNG
HHHLRGGLGGGSSFHLPHGGLLHPHHLGEPQCSSCDEENPATSHCLDCQEYLCDNCVRAH
QRVRLTKDHFIERLGENLHLGRVNANGNPGQPGVSVSLAQSLQNNFALLSLFQDRMSFCQ
HHDNEVFLFFCETCSVPICRECSVGRHMGHTFVYLQDAVQDCRAITIQLLSDAQQGRQAV
QLSMEKVQAMAEQVEIKAKVVQTEVKALVLRHKKALEERECELLWKVEKIRQVKAKSLYL
QVEKLHQSLTKLDSTIDAVSQMLDEGRHLDVLLARERMLTQIHELKALRGLLQPQEDDRF
MFTPPDQAVYIAIQSMGLISSGAFAPVTKAHGEGLKSALRGKPASFTVNGYDHDGEPRLS
GGDTVSAIVMSVTDGNLSTAEVSDHQNGSYTVSYLPKCEGEHLVSVLVCNQHIQGSPFKV
IVKSGRSYGSLGSQVSAFGCEGEGDGQLCRPWGISVDKEGYVVVADRSNNRIQIFKPCGA
FHHKFGSLGSRPGQFDRPAGVACDSQRRIIVADKDNHRVQVFTFEGQFLLKFGEKGTKNG
QFNYPWDVAVNSAGKILVSDTRNHRVQLFTPDGSFLNKYGFEGALWKHFDSPRGVAFNHE
DHLVVTDFNNHRLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQENRIIVADSRNHRV
QVFEPNGNFLCKFGTQGSGYGQMDRPSGVAVTPDGVIVVVDFGNNRILKF
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtttccagactcggacctgcagacgtgccctctctgcaaggagctttgcggc
tcctctgcacctatttcctccagctcatctacctcctcatcttcctcacatacctcgtct
tcctccagccagaccaccaggaggctccacgtcctgccctgcctccatgccttttgcagg
cagtgtctggagggccagcgcagtcctggggacccgctgaagctgcggtgccccacctgc
gaccagaaggtgtccatctctgaggccggggtggactccctgccttcctccaacttcctc
ttcagcaacctgctggacgtggtggtgagctctgaggagcagatccagaacaagaatggc
caccaccacctccgaggaggcttaggcggaggctccagcttccatctccctcatggaggc
ctgctgcaccctcaccacctgggagaacctcaatgcagctcctgtgacgaggagaaccca
gctacctcccactgccttgactgccaggagtatctgtgtgacaactgtgtgcgtgcacac
cagagggtgcggctgaccaaagaccactttatagagcgcctgggagagaacctccacctg
ggccgggtcaatgccaacggcaacccagggcagcctggggtgtcggtgtccctcgcccag
tccctccagaacaactttgccctactgtccctgtttcaggatcgcatgagcttctgccaa
caccatgacaatgaggtattcctgttcttctgtgaaacctgctcggtgcctatctgcagg
gagtgcagtgtgggccgtcatatgggccacaccttcgtttatctacaagacgccgtacag
gactgcagggccatcaccatccagctgctgtcagatgcacagcagggacgacaggctgta
cagctaagcatggagaaggtgcaggccatggcagagcaggtggagatcaaagccaaggtg
gtgcagactgaagtgaaggcccttgtcctcagacacaaaaaagcgctggaggagagggaa
tgtgaactactgtggaaggtggagaagatccgtcaggtgaaagccaagtctctgtacctg
caggtggagaaactgcaccagagtctgaccaagttggacagcaccatcgatgctgtcagc
cagatgctggacgagggccgccaccttgatgtgctgctggccagggagcgaatgctcacc
cagatccatgaactcaaagctttgaggggcctgctgcagccgcaagaggatgatcgcttc
atgttcactcctccagaccaggctgtgtacatagccatccagtccatgggccttatcagc
agcggagcctttgccccggtcaccaaagcccatggcgagggtctaaaaagcgctcttcgt
ggcaagccagcctccttcactgtgaacggatatgaccatgacggcgagccacgtctttcc
ggcggggacacagtgtctgcaatagtcatgtcagtcacagatggtaacctgtctacagca
gaggtatcggaccaccagaatggctcatacaccgtcagctacctgcctaaatgtgagggg
gagcacctcgtgtcggtgttggtgtgtaaccagcacatccaggggagccccttcaaggtg
atcgtgaagtcagggcggagctatggctccctgggctcccaagtgtcagccttcgggtgc
gagggggagggagatggtcagctgtgtcgtccatggggtatcagcgtggacaaggaggga
tacgtggtggtggccgatcgcagcaacaaccgcatacagatattcaagccttgcggtgcc
ttccaccataagtttggctctctgggttcccggcctggtcagtttgatcgtccagcgggt
gttgcgtgtgacagtcagagacgaatcattgtggctgataaggacaatcaccgtgtgcag
gtgtttacttttgagggccagttcctgttgaagtttggagaaaagggtaccaagaacggg
cagttcaactatccctgggatgtggctgtcaactctgcgggtaagatcttggtctcggac
accaggaaccaccgtgtgcagctcttcacccctgacggctctttcctcaacaagtacggc
tttgagggggccctgtggaaacactttgactctcccagaggagtggcctttaaccacgaa
gaccacctggtggtgaccgacttcaacaaccaccggcttctggtcatccggccggactgc
cagtcagctcgctttctgggctctgagggcaccgggaacgggcagtttctgcgaccccag
ggcgtcgctgtggaccaggagaaccgcatcattgtggcagactcccgcaaccaccgagtc
caagtgttcgagcccaatggaaacttcttatgcaaatttggcacacaggggagtggctat
ggacagatggatcgcccctcaggtgtggctgtgacgcctgacggagtcattgtggtcgtt
gactttggaaataatcgcatcctcaagttctaa
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integrated database retrieval system
