Micropterus salmoides (largemouth bass): 119907285
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Entry
119907285 CDS
T07309
Symbol
arhgef1a
Name
(RefSeq) rho guanine nucleotide exchange factor 1a isoform X1
KO
K12791
Rho guanine nucleotide exchange factor 2
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
119907285 (arhgef1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119907285 (arhgef1a)
Membrane trafficking [BR:
msam04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
119907285 (arhgef1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
SOS1_NGEF_PH
C1_2
PH_13
Prok-RING_1
BRISC_FAM175B_helical
Poty_PP
PHD
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
119907285
NCBI-ProteinID:
XP_038580969
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MSRVANLSKLRQERMKEINLRNKERERMREREKAAREREARYSNGHLFTSLTVSGTTLCS
ACNKSITAKEALSCPTCNVTIHNRCRDTLPNCAKMKQRQQKTALMRNNSSLQNVNLRTKT
PGMRERPSSAIYPSDSFRQTLLGSRRGRSGLSLSKSVSTNNIAGTLNDDSPLGLRRILSQ
STDSLSFRARAMSVESLNDDGDLYYTSVLEEMELEGQDFKADSWSMAVDSSYLQTHRKNI
IKRQDVIYELIQTEVHHMRTLHIMERVFRQGMLEELQLDPITVHAMFPCLDQLIRIHSHF
LAQLLMRRNSSLQPGSNCNFTIHKLGDILLEQFSGQCADDMRKTYAEFCSRHLKAVKLYK
ELLARDKRFQCFIRLMSRGPLLRCHGVQECILLVTQRISKYPVLIQRILENTSEDEEEAS
CLAQALLMNRELLSSIDQQMEDLEKTQRLQEIQAKLDPRAEARVRDGGIFKPGELLRRRL
IHEGTLFWKTPGSRLKDIQVLLMTDILVFLQEKDQRYIFPCLDKPPVLSLQNLIVRDIAN
QERGMFLISDSSPPEMYEFHAATKEDKNVWIRHIQRTVSKCPSREEFPLIETEHKAHLRR
LKADLQQKDREMLELLQERVTLFCELTEVTSGQEGLQPPITRYLFRADTPQAPRAEKLLL
DATAEVDRLSELLLGSSMDIPLPCLHNHMEVVETCDQDLFNGAHDYSAAKGCMRNQDKPP
PTEIYQTLVNLSVYLHALQGAIIKQDSILELLLQPQDTLAPAGGGVWRPLWRDGGNRDNS
AGSTIGELALLQRQHSLLQEELLRLRDAESRFKDSERARAKLERQVRHMKVCSGAPLASQ
QLGEQSFQPTSLQPGREVSTGDDTLQASQEPTHQSDGLQDSSDLEVDMTSDDDDGTASES
SKDLQDIPEDI
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgtccagagttgccaatctgtcgaagctgcggcaagagaggatgaaggagatcaacctg
cggaataaagagagagagcgtatgagggagcgggagaaggcggcaagggagagggaggca
cgttacagcaatggtcatctcttcacctccttgacagtgtcaggaaccacgctctgttca
gcatgcaacaagagtattactgccaaggaggcactcagctgccctacatgcaatgtcact
atccacaaccgctgtcgagacactttgccaaactgtgccaaaatgaaacagaggcagcag
aagacggcccttatgcggaataactcatccttgcagaatgtcaatctgcgcacaaaaact
ccaggaatgcgcgagcgtccgagttcagccatctacccttccgacagcttccgacagacc
ctgctgggatcccgccgtggtcgctccggcctatctctgtccaagagtgtctccaccaac
aacattgcagggaccctgaatgatgactctcccttggggctgcgcaggatcctgtcccag
tctacagactccctcagcttcagggctagagctatgtcagtggagtctctcaacgatgat
ggagacctctactatacttccgtactggaggagatggagttagagggccaggattttaag
gcggactcgtggagcatggcggtggacagcagttacttgcagacacaccgcaaaaacatc
atcaagaggcaggatgtcatctatgagctgattcagacagaggtgcaccacatgcgaaca
ctgcatattatggaaagggtgttccgacagggcatgctggaggagcttcagctggatccc
atcaccgtgcatgccatgttcccgtgcctggaccagctgatcaggattcattcccatttc
ctggcacaacttctcatgcggcgcaacagcagcctgcagcctggatccaactgcaacttc
accattcacaagctgggggacatactattagagcagttctcaggccagtgtgcagatgac
atgcggaagacctacgctgaattctgtagccgccacttgaaggctgtcaaattgtacaag
gaactactggccagagacaagaggttccagtgcttcatacggctgatgagtcgaggaccc
ttgctgcgctgccatggggttcaggagtgcatcttgttggtgactcagcggatctccaag
tatcctgttcttatccagcgcattctggagaacactagcgaggatgaagaagaagcttcc
tgtctggcccaggctctcttgatgaacagagaacttcttagttcaatagaccaacagatg
gaggacctggagaaaacacagcggctgcaagagatccaggccaaactggacccacgggct
gaggccagagtaagggatggaggaattttcaagcctggagagttgctccgccgcagactc
atccatgaagggaccctcttctggaaaacgccaggatcccggctcaaagatatacaggtc
ttactgatgacagacatcctggtgtttctgcaggagaaagaccagaggtacatctttcca
tgtctggacaaacctccagtgctgtctcttcagaacctgatagtgagggatatagccaat
caggagcgaggcatgttcctcatcagtgactcctcccctcctgagatgtatgagttccat
gctgcaaccaaggaggacaagaacgtctggatccgccacatccagcgcaccgtcagcaag
tgcccatctagagaggagttccccctcatagagactgaacacaaggcccacctgaggaga
cttaaagctgacctccagcagaaggaccgggaaatgctggagctcctgcaagagagggtg
actctcttctgtgagctgacagaggtgaccagtggtcaggagggcctacagcctcccatc
actcgctacttgttcagggcagacacaccccaagccccccgtgcagaaaaacttctactg
gatgccacagctgaggtggacagactaagcgagctacttctgggctccagcatggacatc
cctcttccatgtcttcacaaccacatggaggtggtagaaacctgtgatcaggatctgttc
aatggagcccatgactactctgcagcaaagggttgcatgaggaatcaagacaagccacca
cccacggagatatatcagacgctggtgaatctcagtgtttatctccatgcactccagggt
gctattatcaaacaagactccatcttggagctgttacttcagccgcaggacaccttggca
ccagctggaggaggtgtgtggcgccccctctggcgagatggtggaaatcgggataacagt
gcagggtcaaccattggggagctggctcttttgcagagacaacacagcctgctgcaggag
gagctgctgaggctgcgggatgccgagagccggttcaaggacagtgagagggcccgggcc
aaactggagaggcaggtccgacacatgaaggtctgcagtggtgctccacttgcatcccag
cagctgggggaacagtcttttcaacctacatctctgcagccgggtagagaggtctcaact
ggagatgacacactgcaggccagccaggaacccacccaccagtcagatggcctccaggac
agcagtgatttggaggtagacatgacatcagatgatgatgatgggacggcatctgaaagc
tccaaagatcttcaagatattccagaggatatctga
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