KEGG   Micropterus salmoides (largemouth bass): 119907592
Entry
119907592         CDS       T07309                                 
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4
  KO
K10752  histone-binding protein RBBP4
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03082  ATP-dependent chromatin remodeling
msam03083  Polycomb repressive complex
msam04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    119907592 (rbbp4)
   03083 Polycomb repressive complex
    119907592 (rbbp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    119907592 (rbbp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:msam03036]
    119907592 (rbbp4)
Chromosome and associated proteins [BR:msam03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     119907592 (rbbp4)
  Histone modification proteins
   HAT complexes
    HATB complex
     119907592 (rbbp4)
   HDAC complexes
    Sin3A-HDAC complex
     119907592 (rbbp4)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     119907592 (rbbp4)
    PRC2.2
     119907592 (rbbp4)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     119907592 (rbbp4)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    119907592 (rbbp4)
  Chromatin remodeling factors
   NuRD complex
    119907592 (rbbp4)
   NuRF complex
    119907592 (rbbp4)
   NuRF complex (fruit fly)
    119907592 (rbbp4)
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_DCAF12 WD40_RFWD3 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_RIG_1st eIF2A MIOS_WD40 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 119907592
NCBI-ProteinID: XP_038581245
LinkDB
Position
Unknown
AA seq 425 aa
MADKEAGAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVSRPEGK
DYSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEI
KISHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDASGECRPDLRLRGHQKE
GYGLSWNPNLSGSLLSASDDHTVCLWDISAVPKEGKIVDAKTIFTGHTAVVEDVSWHLLH
ESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILASGSADKTVA
LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSTD
PEAAT
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggcggacaaggaagcaggtgcatttgatgatgcagttgaagagagggtgatcaatgag
gagtacaagatctggaagaaaaacactcccttcctgtacgacctggttatgacccatgcc
ttagagtggcccagtcttactgctcagtggctgcctgacgtctccaggccagaagggaag
gattacagtgtgcaccggctggtgttgggcactcacacatctgatgagcagaatcacctg
gtcattgccagcgtccagctgcccaatgatgatgcccagtttgacgcctcacattatgac
agcgagaaaggagagtttggaggttttggctccgtaagcggaaagatcgagatagaaatc
aagatcagccatgaaggagaggtgaatcgtgcccgctatatgccccagaacccttgcatc
atcgccaccaagacccccacctcagatgtgctggtgtttgactacaccaaacacccctcc
aagccagatgcttctggagagtgccgccctgatctgcgtctcagaggccatcagaaagaa
ggctatggtctctcctggaatcccaatttgtctggctcactactcagtgcttcagatgac
cataccgtctgtctgtgggacataagtgctgtgccaaaggaggggaagatcgtcgatgca
aagactatcttcacaggtcacactgctgtggttgaagatgtttcctggcacttgctacac
gagtcactctttggatctgtagcagatgaccagaagcttatgatttgggacactcgttca
aacaacacctccaaacccagccatgcagtagacgcccacacagcagaggtcaactgtttg
tcatttaacccttatagcgagtttatacttgcctctggatctgcagacaagactgtggct
ctttgggacttgagaaacttgaaactgaagctgcattccttcgagtcacacaaggacgag
atcttccaggttcagtggtcaccccataatgagaccatattggcatccagtggaacagac
cgtcgactgaacgtctgggacctcagtaaaattggagaggagcagtcaccagaagacgca
gaggatggcccacctgagctcctgtttatccatggaggccacacagccaagatctctgat
ttctcctggaaccccaacgagccctgggtcatctgctcggtctctgaagacaacattatg
caagtctggcaaatggctgagaacatctacaacgatgaagatccggagggttcgacagac
cctgaagctgcaacctaa

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