KEGG   Micropterus salmoides (largemouth bass): 119907633
Entry
119907633         CDS       T07309                                 
Symbol
dcaf11
Name
(RefSeq) DDB1- and CUL4-associated factor 11
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
msam  Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:msam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:msam04121]
    119907633 (dcaf11)
Ubiquitin system [BR:msam04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     119907633 (dcaf11)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WDR55 WD40_WDHD1_1st WD40_MABP1-WDR62_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st NBCH_WD40 Cytochrom_D1 Beta-prop_IFT140_1st Beta-prop_LRRK2 PROPPIN Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 119907633
NCBI-ProteinID: XP_038581298
LinkDB
Position
Unknown
AA seq 542 aa
MGSQSSSGMSGGRGSSSGNPAEESEVAESNQSSSSSSSSRGRRTADRQQGDRQPASEEDV
DLAEVLAYLLRRGQVRLVHGSGATGLQLVQSYSDSDDDSDGAWEGRLGDRYNPPVDAQPD
THEVDQSEIRTQILLANASSAQKGRKSFTHMLTEREHGRCRGSSFSHGECTRIRTHFLPN
YVSHKDTYQQKAFCGVYSEDGNMFLSACQDQNIRLYDTTRGRFHLRRTVKARDVGWSVLD
VCFTPDTNHVLYSSWSDYIHLCSIDGDSENHTALDLNPDERRFCVFSLAASTDGNEILGG
ANDGCLYVFDLEQNKRTLKIDAHEDDVNAVAFADSSSQLLFSGSDDALCKVWDRRTLRED
RPQPVGQLAGHRDGITFIHSKGDARYLISNSKDQSIKLWDVRKFSPKEGLAASRLAVTQQ
NWDYRWQQVPQRALKRHKLTGDTSVMTYRGHGVLHTLIRCRFSPEFSTGQRFIYSGCSTG
KIIIYDVLTGAVVSKLSGHDACVRDVSWHPYEDNIVSSSWDGAVQMWEHRQTHPLEEERE
RD
NT seq 1629 nt   +upstreamnt  +downstreamnt
atgggctctcagtccagttctgggatgtctggtggaaggggctcttccagtggcaaccca
gctgaggagtctgaagtagcagaatcaaaccagagcagcagcagcagcagcagcagccga
ggccgcaggacggctgacaggcagcaaggagacagacagccagcatcagaggaggacgtt
gacttagctgaagtgctggcttacctactaaggaggggccaggtcagactggtccatggc
agcggagccacagggcttcagctggtccagtcctactctgactctgatgacgacagcgac
ggagcttgggagggtcggctaggtgaccgctacaatccaccagtggacgcccagcccgac
acacacgaggtggaccagagtgagatccgaactcagatcctgctggccaatgcctcctct
gcccagaaaggccgaaagagtttcacccacatgctgacagagagggagcacggcagatgt
agaggctccagtttttcccacggagagtgcactcgtatccgcacacattttctgccaaac
tatgtatcccacaaggacacataccagcagaaagccttctgcggagtgtacagcgaggat
ggcaacatgttcctctctgcctgccaagaccagaacatccgcttgtacgacaccaccagg
gggcgcttccacctgcggcgaacagtgaaggcccgggatgtgggctggagtgtgctggac
gtgtgcttcacccctgacacaaatcacgtgctctactccagctggtctgactacattcat
ttgtgcagtatagatggagacagtgaaaaccacaccgccctggacctcaatccagatgag
aggaggttctgtgtgttctcactggctgcgtccacagatggcaatgagatcctcggagga
gcgaatgatggctgcctttacgtttttgatcttgagcagaataaacgaacgttgaagatt
gatgcccatgaggacgatgtgaatgcggtggcattcgccgacagctcgtcgcagctgctc
ttctctggcagcgacgacgcgctgtgcaaggtgtgggacagacggacgctgcgggaggac
agaccgcagcctgtcggacagctggccggccaccgagacggcatcaccttcatccacagc
aagggtgacgcgcgctacctgatcagcaactcaaaggaccagtccatcaagctctgggac
gtcagaaagttctcgcccaaagaggggctggcagcttcacgcctggctgtcacccaacaa
aactgggattaccgctggcagcaggttccccagagagcgctgaagagacacaagctgacg
ggcgacacctcggtcatgacctaccgtggtcacggcgttctgcacacgctcatccgctgt
cgtttctctccggagttcagcaccggacagaggttcatctactccggctgctccactggc
aaaatcatcatttacgacgtcctgacgggcgccgtggtctccaaactgtcaggccatgac
gcgtgcgtgagggacgtcagttggcacccgtatgaggacaacatcgtcagcagctcttgg
gacggagcggtgcaaatgtgggagcacagacagacccatcctctagaggaggagagggag
agagactga

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