Micropterus salmoides (largemouth bass): 119907966
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Entry
119907966 CDS
T07309
Name
(RefSeq) POU domain, class 2, transcription factor 1 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119907966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119907966
03021 Transcription machinery [BR:
msam03021
]
119907966
Transcription factors [BR:
msam03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
119907966
Transcription machinery [BR:
msam03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
119907966
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Motif
Other DBs
NCBI-GeneID:
119907966
NCBI-ProteinID:
XP_038581622
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MSKAAEEEKPGADYPGDSSDSDRNSPDDQVQPMKTSPFSLSPTPTGTKRKSEDSSEMTHT
AAPPAPPSQQQQQTQHHHTQLMLAGSQLAGLAALLPAQQQLLLQQAQAQLLAAAVQQSNA
AHAAHAAHAAAQHQANQQQQQQQQQNQSQSQQQQQPTKQEQQAPPPHLALTQPIQLTAQD
IQQLLQLQQLVLMPGHHLQSPAQFLLSQPAQAQQPQQGLLSTQNLIQLPQQSPGGLLTTP
PRLGLQAQREKSSDVVVGGSSSSGSIVATGSSGVGVVTSVGVTSASSSAMASSMASGLTP
GGHGGHLGEEPSDLEELEQFARTFKQRRIKLGFTQGDVGVAMGKLYGNDFSQTTISRFEA
LNLSFKNMCKLKPLLEKWLGDAETMAVDSMLPSPSSISSPMLGIEGLPGRRRKKRTSIET
NVRVALERNFHTNQKPTSEEILLMAEQLNMEKEVIRVWFCNRRQKEKRINPSSSTTPPLP
SQTSPVVSHKASCYSPHMISSQGLSQVTTSLSTATAASSSPSASCPMTPVSSAAVGSTSS
AVTPPPHSTASPAPPSLGAHGLNTGNTMMGVSTGMNQALIGSNPLATMQALAASSGQLPI
SSLEGGAGHMLLGGPGGPTVPPSFRSSLFLNRPTLLPMVTGSMATASTPAIGLVSGGGSS
GGGCGPRPPFSQSPSHGASGLMSPTSCPEESTSPCSSPASFCSFSEASPPPLGGAMAE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagcagcagaggaggagaagcctggggctgactatccaggggacagttcagac
tctgacagaaacagccctgatgaccaggtccagccaatgaaaacaagcccctttagcctc
tctcccacaccaactggcaccaagagaaagagtgaggacagctctgagatgacccatact
gctgctcctcctgcgcctccctcccaacaacagcaacagactcaacaccaccacacacag
ctgatgctggctggcagtcagctagcagggcttgccgctctcctcccggctcagcagcag
ctcctcctccaacaggctcaggctcagctcctggcagccgccgttcagcaatcaaatgct
gcccacgccgctcacgctgcccacgccgccgcgcagcatcaagccaaccagcaacagcag
cagcaacagcagcagaaccaatcacaatcccagcagcagcaacagccaaccaaacaggag
caacaagcaccgcctccacatctggccctgacgcagccaatccagctcacagcccaggac
atccagcagctgttgcagctccagcagctggttttgatgcctggtcatcatctccagtct
cctgcccagttcctcctttctcagccagcacaagcccagcagccgcagcagggtttgctc
tcaacacaaaatctgatccagctacctcagcaaagcccagggggactactgacaacccca
cctcgcctgggactccaagcacagagggagaagagcagtgatgttgtagtcggtggaagc
agcagcagcggctctatagttgccaccggcagcagtggcgttggtgttgtgacgtctgta
ggagtcacctctgcatccagcagtgctatggcttcctcgatggcttccggcctgactcct
ggaggtcacgggggtcacttgggagaagagcccagcgacctggaggagctggagcagttt
gcccgcaccttcaaacaacgacgcatcaagctgggattcacccagggagacgtcggcgtg
gctatgggaaagctttatggcaacgacttcagccagaccaccatttcccgatttgaagca
ctcaacctgagctttaagaacatgtgcaagctgaaaccactgctcgagaaatggctgggt
gatgcagaaaccatggcagtagatagcatgcttcccagcccgtcttctatctcctccccc
atgttgggcattgagggtctacccggccgacgtaggaagaaacgcaccagcatcgagacc
aacgtgcgagtggctttagagcgcaacttccacacgaaccagaagcctacctcggaggag
atcctgctcatggcggagcagctcaacatggagaaggaggtgattcgtgtttggttctgc
aaccgcaggcagaaagagaaacgcatcaacccctccagcagcacaacccctcccctaccc
agccaaacctcgcctgttgtgtcacataaagcctcctgctacagcccgcacatgatatcg
agtcagggcctgtcccaggtcaccaccagcctcagcacagcaacagccgccagttcgtca
ccttcagcatcctgtcccatgactccagtaagctcagctgcagtaggctccacctcttct
gctgtaaccccgccccctcatagcacagccagccccgcccctcccagtcttggggcccac
gggctcaacactgggaacacaatgatgggagtaagcacagggatgaaccaggccctcatt
ggcagcaatcccctggctaccatgcaagcactggcagccagcagcggtcaactgcccatc
tccagccttgaggggggagctggtcacatgcttctgggtggacctgggggtccgactgtc
cccccttctttccgctcctccctattccttaaccgccccaccctccttcctatggtgacc
ggctctatggcgacagcctccacgcctgccattggactggtcagcggcggtggcagcagt
ggtggtggatgcggcccaaggccccccttctcccaatctccatcccacggcgccagcggc
ctcatgagcccaacctcatgcccagaggagtccacatctccttgttcaagtcccgcctct
ttctgttccttcagtgaagcctcaccgccgcccctgggaggggccatggccgagtga
DBGET
integrated database retrieval system
