Micropterus salmoides (largemouth bass): 119908239
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Entry
119908239 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03030
DNA replication
msam03410
Base excision repair
msam03420
Nucleotide excision repair
msam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119908239
03410 Base excision repair
119908239
03420 Nucleotide excision repair
119908239
03430 Mismatch repair
119908239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msam03032
]
119908239
03400 DNA repair and recombination proteins [BR:
msam03400
]
119908239
DNA replication proteins [BR:
msam03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119908239
DNA repair and recombination proteins [BR:
msam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119908239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
AAA_22
AAA_17
AAA_5
AAA_30
RNA_helicase
AAA_33
NTPase_1
RuvB_N
AAA_18
AAA_14
Viral_helicase1
Rad17
AAA_7
Motif
Other DBs
NCBI-GeneID:
119908239
NCBI-ProteinID:
XP_038581880
LinkDB
All DBs
Position
Unknown
AA seq
498 aa
AA seq
DB search
SGPPGVGKTTTAALVCEELGFSYVEMNASCTRSKNSLKEVVAESLNNTSIENFYKGTSQT
VTSKHVLIMDEIDGMAGNEDRGGIQEMIGLIKNSKIPIICMCNDRNHQKIRSLANYCFDL
RFQRPRVEQIKGAMMSIAFKEGIKIPPPALNEMILASNQDVRQVIHNLSMWSAKDKVMTY
DQCKSDAANARKDMKMGPFDVCRKVFALGEETHMSLIDKSDLFFHDYSLAPLFVQENYLH
VRPKAAGGDLKSHLVLLSKTADSISDGDLVDRRIRSGQNWSLLPTQAIYASVLPGELMRG
YMSHYPTFPSWLGKNSSTTKHSRIVQELTSHMCLKTLSSRQAVNLEYLHYLRQALLNPLQ
RHGAEGAGEAVQLLDDYQLIKEDVDSVMEISVWGGQPDPYSKLDSKVKAAFTRAYNKEAH
LTPYSLQAVKKGRRGGGESELGGEDVDNEVQESEDEGEGLKTDAMIKQKKAKATKESKKE
KKEDSGKGKGKGKGKAKK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
tctggacctccgggggtggggaagaccaccacagctgccctggtctgtgaggagttgggc
ttcagctacgtggagatgaacgccagctgtactcgtagcaaaaacagcctgaaggaggtt
gtcgcagagtcacttaacaacaccagcatcgagaacttctacaaaggcacgtctcagacg
gtgactagtaaacacgtcctgatcatggatgagattgatggcatggctggcaatgaggac
cgcggaggaatccaggagatgatcggcctgatcaaaaattcgaagattcccatcatctgc
atgtgcaacgatcggaaccaccagaagatcagatcactggccaactactgcttcgatctg
cgcttccagaggccgcgagtggaacagatcaagggagccatgatgtccattgctttcaag
gagggaatcaagatcccacccccagctcttaacgaaatgatcctagcctccaatcaggat
gtccgacaggtgatccacaacttgagcatgtggtcagccaaagacaaggtgatgacgtat
gaccagtgcaagtctgacgcagccaatgcccgcaaggacatgaaaatggggccgtttgat
gtttgtcggaaggtgtttgccttgggagaggagacccacatgagcctcatcgacaagtcc
gacctcttcttccacgactactcgctagcgccgctctttgtccaagagaactacctgcat
gttcgtccaaaggctgccgggggtgatctgaagtcccacctggtgttgctcagcaagact
gctgactccatctccgacggagacctggtggacagacggatccgctctggacagaactgg
tcactgctgcccacccaggccatctatgccagtgtgttaccaggcgagctcatgagaggc
tacatgagtcactaccccaccttccccagctggctcggcaaaaactcctccaccactaaa
cattcccgcatcgtccaggagctgacctcacacatgtgtttaaagacgttgagcagcagg
caggcggtgaacctggaatacctgcactatcttcgccaggcgctgcttaatccactccag
aggcacggagcggagggtgccggcgaggctgtgcagctgctggacgactaccagctcatc
aaggaagacgtggacagcgtcatggagatcagtgtctggggcggacaacctgacccctac
tccaaactggactctaaggtgaaggcagcattcactcgggcctacaacaaggaagctcac
ctgactccgtactccctgcaagcagtgaagaagggccgccgaggtggcggggagtcagag
ttgggaggagaggatgtggacaacgaagtgcaggagtctgaggacgagggcgagggcctg
aaaactgacgccatgatcaaacaaaagaaggccaaagccaccaaggagtccaagaaggag
aagaaggaagattctgggaagggcaaaggcaaggggaaaggcaaggccaagaaatga
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