Micropterus salmoides (largemouth bass): 119908269
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Entry
119908269 CDS
T07309
Name
(RefSeq) nuclear pore complex protein Nup54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119908269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119908269
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119908269
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
Keratin_2_head
Motif
Other DBs
NCBI-GeneID:
119908269
NCBI-ProteinID:
XP_038581912
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MNHECLFVVSRSVFCASLIDCLFCVCSFLVALTAPGFGAATTTAAAPATGFSFGSTNTGT
FGGFGTTTTSAAAPGSSFSFAAPTNTAGSLFGNTQNKGFGFSSGLGTGTATGTGFGTGLG
TTGLGGFGGFNIQPTQQQQGGLFGQQAQQPGQAQPTQLYQQVTALSAPTLLGDERDSILA
KWNQLQAYWGTGKGFYSNNHPPVDFTQENPFCRFKAVGYSCVPVSKDEDGLVVLVLNKKE
ADVRAQQQHLVESLHKVLGSNQTLAVNVDGVKALPSDQTEVIIYVVERSPNGTSKRIPAT
TLFGYLEQANIKIQLTQIGVAMTVTRTELSPAQLKQLLQNAPAGVDPIIWEQAKVDNPDP
EKLIPVPMVGFKELLRRLQIQEQMTKQHQTRVDIISNDISELQKNQATTVAKIAQYKRKL
MDLSHRVLQVLIKQEIQRKSGYAIQVDEEHLRVQLDTIQSELNAPTQFKGRLNELMSQIR
MQNHFGAVRSEERYNVDADLLREIKQHLKQQQDGLSHLISVIKDDLEDIKLIEHGLSDSG
HMRGGLLS
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatgaatgtttgtttgttgtatccagatcagttttttgtgccagtttaattgac
tgcctgttctgtgtctgctctttccttgtagctcttacagcccctggttttggggcagcc
accaccactgctgctgcaccagccacaggatttagttttggctccaccaacactggcacg
tttggtggttttgggacgactacaacatctgctgctgcaccagggtcctcttttagcttt
gctgctcccaccaacaccgcaggaagcctgtttggtaacacgcagaacaaagggtttggg
ttctcctctgggcttggcactgggactgctactggaacaggatttggaactggattagga
acaactggcctgggtgggtttggaggttttaatatccagccaactcagcagcagcaagga
ggcttgtttggtcagcaggcccagcaaccaggtcaggctcagcccacccagctttaccag
caggtcactgctctgtcagctcccactttgttaggagatgagcgagactccatcttagcc
aaatggaaccaactgcaggcttactggggcactggaaagggcttctacagcaacaaccac
ccacctgttgacttcacccaggagaacccattctgcaggttcaaggcggtgggctatagc
tgcgtcccagtgagtaaggatgaggatggtttagtggtcttggttctcaacaaaaaggaa
gctgatgtgcgagctcagcagcagcatctggtggagtccctccacaaggtcctgggaagc
aaccagacactcgctgtcaatgtagacggtgtcaaagccctgcccagtgaccaaacagag
gtgataatttacgtggtggagcgttctcctaatggcacatccaagcggatccctgccacc
acactcttcggttatctggagcaggccaacatcaagatccagctcacgcagattggcgtg
gccatgacagtcactcgcacagagctgtccccagcacaactcaaacagctgctgcaaaat
gcacctgcaggagtggaccccatcatttgggagcaggctaaggtggacaaccctgaccct
gagaaattaatcccagtgcccatggtgggttttaaggagctgcttcggaggctgcagatc
caggagcagatgaccaaacagcaccagaccagagtggatattatctccaatgacatcagt
gaactgcagaagaaccaggcgaccacagtggccaagattgctcagtacaagaggaagctg
atggatctctctcacagggtgctgcaggtcctgatcaaacaggagattcagagaaaaagt
ggttatgctatccaagtggatgaagagcacctcagggtgcagctggacaccattcagtct
gaactcaatgcccccacacagttcaagggtcggttaaatgagttaatgtcccaaatccgg
atgcagaatcactttggagctgtgagatcagaagagcgctacaatgttgatgcagacctt
ctcagagaaatcaaacaacacttgaaacagcagcaggatggtttaagtcatttgatcagc
gtcataaaagatgacttggaagacatcaaactcatagagcatgggctgagtgacagtgga
cacatgagaggaggcctcctgagctga
DBGET
integrated database retrieval system
