Micropterus salmoides (largemouth bass): 119908768
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Entry
119908768 CDS
T07309
Symbol
prdm1c
Name
(RefSeq) PR domain zinc finger protein 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119908768 (prdm1c)
Transcription factors [BR:
msam03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
119908768 (prdm1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-met
Zf-C2H2_ZNF451_C
zf-C2H2_jaz
Zf-C2H2_ZNF451
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
119908768
NCBI-ProteinID:
XP_038582544
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MCGSSQGFTASSSQRTTVMLTSERSPQSSGIITAAMPGTQDVDMTSWSEADFEEKCTYIV
KDQPLEGESENNSRTRAERSLPRNLALKRCHNSAEVLGVTSKELIPKGTRFGPLVGESYT
DETLLKNADRKYFWRVFSEERLHHILDGLNEERSNWMRYVNPAYTVGEQNLVACQSGLDI
YFYTIKPLQPGQELLVWYCLEFAQRCNYPPLGQLAIDNNEQSQAQEKATRKPGHSVKEIL
RDEPSKSLNTCPRHLESPLSQTNLSVGFPLCPRVVYPIQPHSMESIHGHRYATLPSLPSC
SPPAAKSPALSSPVPSLHFTFQRRQDPVIAKPYQEPSVPDRVYPTLRHAPYLLPHFSLGL
NSILPHSYPVYSDRLKPHLTLSSHLMPFGSYAHIFHPPANGHKDLSLALSNTKQDLILSP
TSEHEDNKDFISKRTNYLRIPSDDLRDFKHSPPRNVHAELSIPATSSASFMVTSQSRRAL
PSLAPGGCSPPVGMAAFSDCLPSKPTSASQSNTEDAVDLTKTQEGGQIIGYKTLSYPLTR
QNGKIRYECNVCGKVFGQLSNLKVHLRVHSGERPFRCQTCNKNFTQLAHLQKHYLVHTGE
KPHECKVCHRRFSSTSNLKTHQRLHSGERPYQCKLCPARFTQFVHLKLHKRLHTEERPHR
CPRCPCAYLHYCSLQVHLQGFCPFSPLASQRHSPEELRQVNSEIERFDMSEAAEQLEAMA
AEPEMDKRNVTDLIKKMETHTCGHPVNAREGAELSVYKAKQCSAVQLHHGSPLPLHPASI
KLESGCISEP
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctcctctcaaggcttcacagcctcctcttctcagcgcaccacagtcatgtta
acttcagaaaggtcaccgcaaagctcagggatcatcacggcagcgatgccagggacgcag
gatgttgacatgacatcgtggagcgaggcggactttgaggagaagtgcacttacatcgta
aaggaccaacctctggagggagagtccgaaaacaacagcaggacacgagctgagcgatcc
ttacccagaaacctggccctcaaacgctgccacaactctgctgaggtgcttggggtgacc
agtaaggaactgattcctaaggggacacgttttggcccgctggttggggaaagttacaca
gacgaaacgctgctgaaaaatgctgacaggaagtacttctggagggtcttctcagaggag
cgtttacatcacatcctggatggtttgaatgaggagcggagtaactggatgcgttacgtc
aacccagcctatactgtgggagagcagaacctggttgcgtgccagagcggtttggacatc
tacttctacaccatcaaaccacttcagccaggccaggagctcctggtatggtactgcctt
gaattcgcccagcgctgtaactaccctccgctgggccaactggcgattgacaataatgaa
cagagtcaagctcaggagaaggcaacaaggaaaccaggacacagcgtaaaagaaatcctc
agagacgagccttcaaaatcactgaatacctgcccccgacatctggagagtcctttgtct
cagaccaacctctcagtaggttttcctctgtgcccgcgtgttgtctacccaatccagccc
cactctatggaatctatccatggccatagatatgcaactctaccatctctgccatcctgt
agccctccagctgccaaaagcccagctctaagtagtcctgtcccctctttgcacttcacc
tttcagcgaagacaagaccctgtaatagccaaaccttaccaagagccctctgtgcctgat
cgagtttatcctactctgaggcacgctccctatctattgcctcacttctcacttggcctt
aacagcattttacctcattcatacccagtctacagcgatcgactgaaacctcacttaaca
ctctcatctcatttgatgccttttggcagctatgcacacattttccatcctccggccaac
ggacacaaagacttatcacttgcactatccaacaccaaacaagacctcatcctctcacca
accagtgagcacgaagacaacaaggacttcatctccaaacggacaaactacctcaggatc
ccctcagatgacctcagagatttcaaacactctcctcccagaaatgtccatgcagagctc
tctatacctgccacgtccagtgcctcattcatggtcacctcgcagagtcgcagagcactg
ccctctcttgcacctggaggatgctcaccaccagtgggcatggctgccttttcagactgc
ctcccttccaaacccacctctgcctctcagagtaatactgaggatgcagtggacctcaca
aaaacccaagaaggtgggcagattattggctacaagaccctgtcttaccccctcaccagg
cagaatggaaagatccggtatgagtgcaacgtctgtggaaaggtctttgggcagctgtct
aacctcaaggtccatctgcgagtgcacagcggagagcgtcccttcaggtgtcagacctgc
aacaagaacttcactcagctggcccacctgcagaaacactacctggttcacacaggagag
aagcctcatgaatgcaaggtgtgccataggcggttcagcagcactagtaacttgaagacc
caccagcggctacactcaggcgagaggccttaccagtgcaagctctgcccagcccgcttt
acacaattcgtccacctcaagctccacaaacgcctccacacggaagaacgacctcacagg
tgtcctcgctgcccctgtgcctatctccactactgcagcctccaggtgcacctccaaggc
ttctgccctttctcacccttggcctcccaaaggcactcgccagaggagctacgccaagtc
aactccgagattgagaggtttgacatgagtgaggcagcagagcagctcgaggccatggct
gcggagcccgagatggacaagaggaatgtaactgacctaataaagaagatggagactcat
acctgtggccacccggtcaacgccagagagggggctgagctgagcgtctacaaagcaaag
cagtgttctgctgttcagttgcaccatggcagccctctacctctacatccagccagcatc
aagctggagtcaggctgcatatcagagccctaa
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