Micropterus salmoides (largemouth bass): 119908829 Help Entry 119908829         CDS       T07309                                  Symbol fdft1 Name (RefSeq) squalene synthase isoform X1   KO K00801   farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] Organism msam  Micropterus salmoides (largemouth bass) Pathway msam00100   Steroid biosynthesis msam01100   Metabolic pathways Module msam_M00101   Cholesterol biosynthesis, FPP => cholesterol Brite KEGG Orthology (KO) [BR:msam00001]  09100 Metabolism   09103 Lipid metabolism    00100 Steroid biosynthesis     119908829 (fdft1)  09180 Brite Hierarchies   09181 Protein families: metabolism    01006 Prenyltransferases [BR:msam01006]     119908829 (fdft1) Enzymes [BR:msam01000]  2. Transferases   2.5  Transferring alkyl or aryl groups, other than methyl groups    2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)     2.5.1.21  squalene synthase      119908829 (fdft1) Prenyltransferases [BR:msam01006]  Terpene biosynthesis   Squalene/phytoene synthase    119908829 (fdft1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SQS_PSY HAUS4 Octopine_DH Motif Other DBs NCBI-GeneID:  119908829 NCBI-ProteinID:  XP_038582640 LinkDB All DBs Position Unknown AA seq 456 aa AA seqDB search MAGACCKCPVSLSVFKRSLSVAPRGCGSAPRSLLLSWRLGERGLQEAARPSSALRACSYR HTAFVCLSCQESMSESLRTCYLYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTVE DDMSIPLDKKVPMLNDFHTYLYRDDWCFTQSQEKDRQVLEDFPTISLEFRNLAQEYRDVI SDICHRMGVGMAEFLEKKVGSMKEWDLYCHFVAGLVGIGLSQLFSASKLEDPEVGRDTEL ANSMGLFLQKTNIIRDYLEDTQEGRAFWPQEAWSQFAGRLEDLAQPEKLELGLSCLNLLV TDALRHVPDVIAYLSRLRNQSVFNFCAIPQVMAIATLSTCYNNPMVFQGVVKIRKGQAVT LMMDATNMRAVQTIIAQYSQEILQKVSPTDPSRDKTLHILALIREKSALSQSSLPSRTHH LSPMYLSAAMLLAALSWQYLSTTAAQAQGTGDMQGQ NT seq 1371 nt NT seq  +upstreamnt  +downstreamnt atggccggagcatgctgcaagtgtccagtctccctgtccgtgttcaagcgctcactctcg gtggcgccgcggggatgcgggtccgcacctcggtccctccttctgagctggaggctaggg gagcggggcctgcaggaggccgcccgaccctccagcgcactcagagcatgctcttaccga cacactgccttcgtctgtctctcctgccaggagtccatgagtgagagtctgcggacctgc tacctgtacctgaaccaaaccagccggagttttgcagctgtgatccaagcgctggacggg gagttgagacacgcagtttgtattttctacctggtgctgagagcactggacacagtggag gacgacatgagtatccctctggacaagaaggttcccatgctgaatgatttccacacctac ctgtaccgggatgactggtgtttcactcagagccaggagaaagaccgacaggttctggag gatttccccacgatatcactggaattcagaaacctcgctcaggaatacagagacgtcatc tcagatatctgccaccgtatgggagtcgggatggccgaattcctggaaaagaaagtggga tccatgaaggagtgggacctgtattgccacttcgtggcagggctggttggtattggcctg tctcagctgttctctgcgtccaagctggaggaccccgaggtggggcgggacactgagctg gccaactccatgggcctgttcctccagaagactaacatcatccgagactatctggaggac acacaagagggacgtgccttctggccacaagaggcctggagtcagtttgcaggtcgtctg gaggacttggcccaacctgagaagttggagttgggtctctcgtgtctcaacctgctggtc actgatgctcttcgtcacgtcccggatgttattgcctacctgtcccgcctgcgcaaccag agcgtcttcaatttctgtgccattccacaggtgatggcaatagctacactgtcgacatgc tacaacaaccccatggtgttccagggagtagtgaagatcagaaagggacaggctgtcaca ctcatgatggacgccaccaacatgagagctgtgcagaccatcatcgcccagtacagccag gagattttacaaaaggtctcccccactgacccgtcacgggacaagaccctgcacatcctg gctctaatccgagagaagtctgcactgtcacagtccagcctcccctccaggacccaccac ctgtcgcctatgtacctgtctgctgccatgctgctcgccgccctcagttggcagtacctc agcaccactgcagcacaggcacagggcactggcgacatgcagggacagtga

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