Micropterus salmoides (largemouth bass): 119909041
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Entry
119909041 CDS
T07309
Symbol
capn3b
Name
(RefSeq) calpain-3b isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119909041 (capn3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msam01002
]
119909041 (capn3b)
Enzymes [BR:
msam01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
119909041 (capn3b)
Peptidases and inhibitors [BR:
msam01002
]
Cysteine peptidases
Family C2: calpain family
119909041 (capn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
119909041
NCBI-ProteinID:
XP_038583003
LinkDB
All DBs
Position
Unknown
AA seq
768 aa
AA seq
DB search
MGDKKYKGKVPLAEDTNVRVFYETQMSLGPDDKGYTFDGTNSIYSAILSRNEAVKDAKRL
KTFLELRDKYVKKNVVFEDPLFPANDSSLFYSHKPPMKFEWKRPSEICENPQFIIDGASR
TDICQGELGDCWLLAAIACLTVNEKLLYRVIPPDQSFTENYAGIFHFQFWRYGEWIDVVV
DDRIPTCKNQLVFTKSFRKNEFWSALLEKAYAKLHGSYEALKGGNTLEAMEDFTGGVTEF
FELSEAPKELYNIMRNALERGSLMGCSIDITSASELETRTDQGLVRGHAYSIIGLEECDE
VAKDTRIRLIRLRNPWGFVLWKGPWCPNSKEWSTISIADKENLKKQTVEESEFWMSFDDF
KNNFTKLEMCNLTPDTLQGDERHTWTVSVNEGRWVRGSSAGGCRNFPDTFWTNPQYRLQL
YEEDDDPDDGQVTCTVVVSLMQKGRRMQRHQGAKFLTIGFSIYEVPKEMCEQNQHLQKDF
FLYTASKAKCKAYINLREVTERFRLPPGEYVIIPTTFEPHQDGEFILRVFSEKQSTSEEA
ENIIGQTQQDKKKKEKPIVFVSDRARANKEIEHDGIQGEKRKKPKKKVLQPEQETEEEKQ
FRAIYRQIAGEDMQICANELKMVMKNVLSKYTEIKTEGFSLETCRSMIALMDTDGTGKLN
LQEFKHLWKKIEAWQLIFKRYDKDKSSSISSFEMRNAVNDAGFHLNNQLYGIIAMRYADE
HLNIDFDSYICCFVRLEGMFRAFNAFDKDGDGLIKLNVLEWLQLTMYS
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacaagaaatataaaggtaaagtgcctcttgctgaagatacaaatgtgagagtt
ttttatgaaactcaaatgtcactcgggcctgatgacaaaggttacacatttgatgggact
aactcgatctactctgcgattctaagcagaaatgaggctgtcaaggatgccaagcgtctc
aagacttttttggaactgcgagacaaatacgtgaagaagaacgtggtatttgaagacccc
ttgttccctgcaaatgactcctcgctcttctacagtcacaagcctccgatgaagtttgag
tggaaacgtccctctgaaatttgtgaaaacccccagttcattatagatggagccagcagg
acggacatctgtcaaggcgaattgggtgactgctggctgctggccgccatcgcctgtctg
acagtgaatgagaagctgttgtacagagtgattcccccagatcagagcttcactgagaac
tacgcgggcatcttccatttccagttctggcgttatggagaatggatcgacgtggttgtg
gacgaccgcatccccacctgcaaaaaccagctggttttcaccaaatctttcagaaagaac
gagttctggagcgctcttttggaaaaagcttatgccaagttgcacgggtcttatgaggct
ttgaaaggaggtaacactttggaagccatggaggatttcacagggggagttacagagttt
ttcgagttgtccgaggcgcccaaagagctctacaacatcatgcggaacgcgctggagaga
ggctcgctgatgggctgctccatagatattacttcagcttctgaactggagactcggact
gatcaggggctggtccggggtcacgcctactctatcataggccttgaagagtgtgacgag
gttgcaaaggacaccagaattcgcctgattcgcttacgaaatccctggggttttgtgctg
tggaagggaccatggtgtccaaattcaaaggaatggtcaaccatttccatcgcagacaag
gaaaatctaaaaaaacagactgtagaggagagtgagttctggatgtcatttgatgatttc
aagaacaacttcacaaagctggagatgtgtaacctgacccctgacacgctgcagggtgac
gaaagacacacctggacagtgtcagtcaatgagggccgctgggtgagaggcagctctgct
ggcggctgcaggaacttcccagacacattctggacgaaccctcagtatcggctgcagctg
tatgaggaggatgatgacccagacgatgggcaggtgacctgcactgtcgtcgtctctcta
atgcagaaaggtcgaaggatgcagcgccatcaaggggccaaattcctcaccatcggattt
tccatctacgaggtgccgaaggagatgtgtgaacagaatcaacatctgcagaaggacttc
ttcctgtacacagcctccaaagctaaatgcaaggcctacattaacctgcgagaggtgaca
gagcgttttcggctgcctccaggagagtatgtcatcatccccacgacctttgaaccccat
caagatggagagttcattctcagggtcttctctgagaaacagagcacatctgaggaagca
gagaacataatcgggcaaacgcagcaagacaagaaaaagaaagaaaagcctattgtattt
gtgtcagacagagcacgagccaacaaagaaatcgagcatgatggcattcagggggaaaag
aggaagaaaccaaagaaaaaagtactccaacctgagcaagagactgaagaggaaaaacag
ttcagagccatttacagacagattgctggtgaggacatgcagatctgtgccaacgaactc
aagatggtcatgaagaacgttctctcaaaatataccgaaataaagacagagggtttcagc
cttgagacatgtcggagtatgatcgccctgatggatactgatgggacaggaaagctgaac
ctgcaggagttcaaacacttgtggaaaaagatcgaggcgtggcagctgatcttcaaacgt
tacgataaagacaaatcttcctccatcagtagttttgagatgaggaacgctgttaatgat
gcagggtttcacctcaacaaccagttgtatggcatcatcgccatgcgctacgcagacgaa
cacctcaacatcgactttgacagttacatctgctgtttcgtgaggctagagggcatgttc
agggctttcaatgcctttgacaaagacggagatggactaatcaagctcaatgtcctggag
tggcttcagctgaccatgtattcttaa
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