Micropterus salmoides (largemouth bass): 119909205
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Entry
119909205 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msam03400
]
119909205
DNA repair and recombination proteins [BR:
msam03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
119909205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Motif
Other DBs
NCBI-GeneID:
119909205
NCBI-ProteinID:
XP_038583239
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MGVHDLWSIVEPVRESVSLYSLSGKTLAVDLSLWXCEAQHVQAMMGRVTKPHLRNLFFRV
SSLTLMGVKLVFVMEGEAPKLKAETMTKRTEKRYGGFKKSSASKSSTNTSRGRFNAVLRE
CAEMLDYLGVPWVTAAGEAEAMCAYLDSEGLVDGCITNDGDAFLYGARTVYRNFNMNSKD
PQVDCYRTSSVQTELHLSRENLVGLALLLGCDYIPKGIPGVGKEQALRLIQMLKGQTLLE
RFNQWREENAGVSEGVVKKVAHCHVCRHPGSAKGHERGGCVLCDSKRFCQPQDFDYQCPC
DWHRHEQTRQAVSFEANIRKKTLASQQFPFTEIIREFLISKDKSVSHFKRRQPNMLLMQK
FAYDKMEWPKHYTSEKVLVLMTYTELMNRKYGREMSSQIRPLRILKPRVRNAVACFEIIW
STPEHYVFPEDWPAEDQHEVRTVEEESLFRVAYPEVVESYLRDKALAEENKKKRPKSKKE
KPSDVSDGISDLLAQMSLHSSTNTEPQTVLPTILNTEEAEVVVLDTPVNHKKQWKSKEGH
SSLGDCPKTPLSHAESEAVASPSVSTVIDTLHLSDIDWDTLSFTSSPTPPSAANHTAEPK
LTKTTDDEVKETNASSDVKPADSRSALELCYTDCPLRDRVLMRNTAKAIDQTEIHNDVVS
KQLNYGLASLKHISSRNSQPNGQIITKGRDDNKLSRQESAVNKKEPLTDKRQCATNKAVQ
GRSKTKDKCNGSQKPPQKYKFVKVVSSSAVPPQRCHSDPGQSDKDLNLQQSTKKSVCMSM
CLSSEGSDAENQQFGPQRKAKVKPINRSKGNILSDFPLKPVSGPKTTKPTAKTHQLIPIS
TKSTYKDVSPTNADADVSLQTPTSPVDDSVICSESPLPLAERLRLKFLK
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttcacgatttgtggtctatagtcgagccggttcgtgagtcggtttcgctctac
agtttgagcggaaagacgctggcagttgacctgagtttatggngttgcgaggcccagcat
gtccaagcaatgatggggagagttaccaaaccccacctcaggaatttattttttagggta
tcatccctcacgcttatgggggtgaagctcgtctttgtaatggaaggagaagcgccgaaa
cttaaagcggaaaccatgaccaagaggacagaaaaaagatatggaggattcaaaaagtct
tctgcctctaagtcttcaacaaacaccagcagagggcgctttaatgctgtactaagagag
tgtgcagaaatgttggactatctgggtgtgccgtgggtgaccgctgctggggaggctgag
gccatgtgtgcctacctggactcagagggcctggtggacggctgcatcactaatgatgga
gacgcattcttgtatggagcccggactgtctacaggaactttaatatgaacagtaaagac
cctcaggtggactgttacaggacctccagcgtacaaacggagttgcacctctccagagag
aatcttgtcggtctggccctcctcctgggctgtgattatattcctaaaggcataccaggt
gttggaaaagagcaggctctgaggcttatccagatgctgaaaggacaaacccttctggag
aggttcaaccaatggagggaggagaatgcaggtgtgtcagagggagttgtgaagaaggtt
gctcactgccatgtgtgtcgacatcctggctcagcgaaaggacatgaacgtggcggctgt
gtgctttgtgacagtaaacgtttctgtcaacctcaggactttgactaccagtgtccctgt
gactggcaccgccatgaacagacccgccaggccgtgtcttttgaggcaaacatcaggaag
aaaacactggcaagtcaacagttcccctttaccgagatcattcgtgagttccttatctcc
aaggataagtctgtgtcacatttcaagaggagacagccaaacatgctgttgatgcagaaa
tttgcctatgacaagatggagtggccaaagcactacaccagtgaaaaggttttagtcttg
atgacctacacagagttgatgaacagaaagtatggaagagaaatgtcttcccaaatcagg
cccctcagaatattgaagccgagggtgaggaatgccgtcgcttgcttcgaaatcatctgg
agcacaccagaacattatgtgtttcctgaggattggcctgcagaggatcaacatgaggtg
aggacggtggaggaagagtctcttttccgtgtggcgtacccagaggtggtggagagctac
ctgagagacaaagccctggccgaagagaacaagaagaaaaggccaaagagtaaaaaggag
aagccatctgatgtctctgatggtatttcggacctcttggctcagatgagccttcacagt
tccactaacactgaaccacaaacggtgcttcctaccattttaaacacagaggaagcagaa
gtagtggttttggacactccagtgaaccataaaaagcagtggaagtcaaaagaaggccac
agcagtctgggtgattgccccaaaactcctctgtctcatgcagaatcggaggctgtagct
tcgccttctgtctccactgttatcgacactctacacctgagcgatattgactgggacact
ttgtccttcacgtcctctccaactccaccatcagccgctaaccacactgctgagcccaag
ctaaccaaaaccacagatgatgaggtcaaggaaacaaatgcctcaagtgacgtcaaacca
gcagactccagatctgctctagagttgtgctacacagattgtcctctaagggacagggtg
ctcatgaggaacacagctaaagctatagaccagacagagatacacaatgatgtggtctca
aaacaactaaactatgggttggcctctctcaaacacatttcttctcgtaactcacaacca
aatggacagatcatcactaaaggtagggatgacaataaattgtcaaggcaggaatctgct
gttaacaaaaaggaaccgctcactgacaaaaggcagtgtgcaacaaataaggcagtacaa
ggtcgaagtaagacaaaggacaaatgtaatggctcccaaaagcctccgcagaaatataaa
tttgtcaaagttgtttcatcatcggcagtcccgccacagaggtgccactctgacccaggt
caaagtgacaaggacctgaacctgcagcagtccaccaagaagagtgtctgtatgagcatg
tgtttgtccagcgagggaagcgatgcagagaaccagcagtttggacctcaaagaaaagcc
aaggtcaagcccataaacaggagcaagggcaacatcctttcagacttccccctgaaacct
gtttctggacctaaaacaaccaaaccaacagcgaaaacccatcaactgatacccatatca
actaaaagcacatacaaggatgtctcaccaactaatgcggatgctgatgtgtcccttcag
actccaacatcacctgtcgatgactctgtgatttgtagtgagagtccgctgccactggca
gagagactgagactgaaattcctgaagtga
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