Micropterus salmoides (largemouth bass): 119909238
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Entry
119909238 CDS
T07309
Symbol
trpa1b
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily A member 1b
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msam04040
]
119909238 (trpa1b)
Ion channels [BR:
msam04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119909238 (trpa1b)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Ank_KRIT1
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
119909238
NCBI-ProteinID:
XP_038583278
LinkDB
All DBs
Position
Unknown
AA seq
1116 aa
AA seq
DB search
MNFSREVARQTSCYTYVIEDEDPELGSLNVFELAERGDLALLENLVKKSPEVLSEKDECG
ASPLHHAAGGGYVTLMQFITTAIDSQELNSSDEQGNVPLHWAVERNKAESCRALLDLGAN
PNILNTALLSPLHLAVNHGHNSLVELLLSYSTTDCNLQGDLGNTPMILACSINNWEALSI
LLKHGARLCQQNKLGHFPIHAAAFAGAKKAMEVILKAGEEIGHQVEAHINYLDKSKSSPL
HLAVRGGNIEAIRLCLATGAKVDQQQNDKSTPLHLACTQGATEVVKLMLSSFDQVEDVIN
LSDGACQTPLHRATIFDHTELAEYLISLGADLNAIDCKGNTPLLLASSCGAWRTVTLLLS
KGANVNVKDRCGCNFLHLAILQPKGLKNLPEEVLQNNSVKALLSCEDNEGCTPLHYACRL
GIHDSVKNMLGLSGEVGLTCKSKDKKSALHFAAQYGRINTCHRILETITDSRLLNEGDER
GLTPLHLASREGHTKVVQLLLRKGALFHSDYKGWTCLHHAASAGYTQTMEILLSANLKLL
DKTDEDGNTALHIAAREGHVAAVRLMLARGAEIVLNKNDTSFLHEALQNGRTEVVNAIID
SDRCTEALRLFKHGSSQRCPILDMIEFLPETYKHLLDRCVRESDDDYNSPDYHIEYSFTW
LQAPLAAQKSSDKTMRIQPLVALNAMVQYNRIELLNHPVCKKYLAMKWVAYGSTAHVLNM
FLYLLGLLPLTHLIVTLRPTMNTTHTGEHSIKMVPISFTEQSLFLSICMVMVLAMNIYAI
AKEVVQISQQRWNYFKDYSNQSDWLSAILSLLFVIPIMLNAEGSFHWQVGAMAVLNSWIG
FLLYLQRFXGVGIYVVMFWEIMRTLIRIVMVFLYLVLAFGLAFHALMLNQEEFQSVPLSV
MQTFVMMVGELNYQNNFLEAFLNDQLPFGFLTYFIFVNFVLFMPILLVNLMIGLAVGDIA
EVQRNAALKRIAMQIDLHTALEDKLPYWFVKRVDKPSITIYPNRKCSRHYLRQLITGDEE
TEVWSRLQAKSQSCTFLENELKKQKHRMKEMSSSLEKQHNLLKLIIQKMEITSEADEYDG
PVNVRGMWQTLTQAKPRKHTVSRWVPLMKAIESKKK
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcagcagagaggtggcacgacagaccagttgttacacatatgtgatagaggat
gaggatccagagctgggaagcctaaatgtatttgagttggctgagaggggtgacctggct
ctcctggaaaacctggtgaagaagagcccagaggtcctgagtgagaaagatgaatgtgga
gctagtccccttcatcacgccgccggaggaggctacgtcaccctcatgcaattcatcacc
actgccatagactcacaggaactgaacagcagtgatgagcagggcaacgtgcccctacac
tgggcagtggagaggaacaaggcagagagctgcagggctcttctggacctcggggccaac
ccaaacatcctcaacacggccctcctgtcccctctgcatctggctgtcaaccacggacac
aacagcctggtggagctgctgctgtcatacagtactacagactgcaatctgcagggagac
cttgggaacaccccgatgatactggcttgttccatcaataactgggaggctctcagcata
ttgctaaagcatggagcacggctctgccaacagaacaaactcggccatttccccatccac
gcagctgccttcgcaggtgcaaagaaagccatggaagtcatcctgaaggccggagaggag
attggccatcaagttgaagcccacatcaattatttagacaagtccaagagcagtcccctc
cacctagcagtacgtggtgggaatatcgaggccatccgtctctgccttgctaccggggcc
aaagttgaccagcaacagaatgacaagtccacgccgcttcatttggcctgcacccagggt
gccactgaggtagtcaaactgatgctgtcctcttttgaccaagtggaagacgtcatcaac
ctaagtgatggggcatgtcagacccctctacacagggctacaatatttgaccacacagag
ctggcagagtacctaatttctttgggtgcagaccttaatgccattgattgtaaaggaaac
actcccttgctgctggcttcgagctgcggggcatggagaactgtgactctactactgtca
aaaggggcaaatgtaaatgtgaaagacagatgcggttgtaacttccttcacctggccatt
ctacagcccaagggtctaaaaaacctcccagaagaagttctgcagaataacagtgtaaag
gcactgctgagctgtgaggataacgagggctgcaccccactccactacgcttgcagactg
ggtatccatgactcagtgaagaacatgctgggcctctcgggggaggttggcctcacatgc
aagtccaaggacaagaaatctgccctgcactttgctgctcagtatgggcgcatcaataca
tgtcaccgaatattagagaccatcacagactctcgtctgctaaatgaaggtgatgagcga
ggcctgacaccactccatttagcttcaagagaggggcacaccaaggtggtgcagctgttg
ttgcgcaaaggagctctctttcacagtgattacaagggctggacatgtctgcaccatgct
gcatctgcaggatacacacaaactatggaaattctcctgtcagccaatctcaagttactg
gataaaacagatgaggatgggaacactgcactccacatcgcagcgagagagggacatgtg
gctgcagtcaggctcatgctggctcggggagcagagatcgtcttaaacaagaatgacacg
tcattcctccacgaagctctgcaaaacgggagaacagaagtggtcaacgctataattgac
agtgacagatgtactgaggctttgagactgttcaaacatgggtccagccagcgatgtccc
atactagacatgattgagtttctgcctgagacctacaagcacctgttggatcgctgtgtg
agggaatctgatgatgactacaacagtcctgactaccatattgaatacagtttcacatgg
ctccaagctccccttgcagcgcagaagtcaagtgacaaaaccatgaggattcagccactg
gttgcactcaacgcgatggtgcagtacaaccgcattgaactcctgaaccaccctgtctgc
aaaaagtacctagcaatgaagtgggttgcttatgggagcacagctcatgtgctcaacatg
tttttgtacctgttaggcctgctgcccctgactcacctgatagtgactctgaggcccact
atgaacaccactcacacgggcgagcacagtatcaaaatggtacccatatctttcacagag
caaagtctgttcttgtccatctgcatggtgatggtcttggcaatgaacatctacgccata
gcaaaggaagtggtgcagatatcacaacagcgctggaattacttcaaggattactccaac
cagtctgactggctgtcagccatcctctctcttctgttcgtcattcccatcatgctcaat
gcagagggttcttttcactggcaagtaggggcgatggcggttttaaactcctggattgga
tttctcctttatctccagaggttttgaggtgttggcatctacgttgtgatgttttgggaa
attatgagaacactgattcgtattgtaatggtgtttttgtacctggtgttagcgttcggt
ttggcgttccatgcactaatgctcaaccaggaagagtttcagagcgtgccactctctgtg
atgcaaacctttgtgatgatggttggggaactgaactaccaaaataacttcctggaagct
tttctgaatgatcaacttccttttggttttctgacatacttcatttttgtgaactttgtt
ctcttcatgccaatcctgctggtgaacctgatgattggtcttgcagttggagacattgct
gaagtacaaaggaatgccgccctaaaacgaattgctatgcagattgacctccacaccgct
ctagaagacaagctgccttattggtttgtgaaacgagttgacaaaccctccatcaccatc
taccccaatcgcaagtgctccaggcactatctgaggcaattaatcacaggtgacgaggag
actgaagtctggagtcgtctgcaggccaaatcacagagctgcacttttttagagaatgag
ctcaaaaagcagaagcacaggatgaaggagatgtcaagctcgctggagaagcagcacaac
ctcctgaagctcatcatccagaagatggagatcacctctgaggccgatgagtacgatggt
cctgtgaacgtcagaggcatgtggcaaaccttgactcaggccaaaccaagaaaacacacc
gtgtctcggtgggtcccgctaatgaaggccatcgagtccaaaaagaaatga
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