Micropterus salmoides (largemouth bass): 119909278
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Entry
119909278 CDS
T07309
Symbol
lrfn5b
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
msam04990
]
119909278 (lrfn5b)
Domain-containing proteins not elsewhere classified [BR:
msam04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
119909278 (lrfn5b)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_5
LRR_1
ig
Ig_2
LRR_9
Sp38
fn3
V-set
DHU1_N
C2-set_2
Motif
Other DBs
NCBI-GeneID:
119909278
NCBI-ProteinID:
XP_038583340
LinkDB
All DBs
Position
Unknown
AA seq
811 aa
AA seq
DB search
MFHLQGVLSQLKSQMESLLVYLIVLGVAVKAHKVQVCPKRCVCQVLNPNLATLCDKKGLL
FVPPNIDRHTVEMRLGDNFVTSIKRKDFANMTKLVDLTLSRNTIGSIAPHAFKDLENLRA
LHLDSNRLTRITNDTFSGMSKLHHLNLNNNQLTHIQIGAFNDLTALEELDLSYNNLESAP
WVAIQRMSNLHTLNLDHNMLSHIPEGTFSGLQKLKRLDVTSNKLQKLPPDPIFQRAGVLA
TSGIMGPLSFALSFGGNPLRCNCELLWLRRLRREDDLETCASPQHLAGRYFWTVSEEEFL
CEPPLITRHSQELRALEGQSVTLRCKARGDPDPIIHWIAPDGRLMSNSSRAAVHTDGTLD
ILISTVKDSGSFTCVASNPAGEAQQTVELVIAKLPHITNNTVAEQEPDPGSSDIATVTKT
GQRREGPLGNAKTSQEKKVVIAEATSTSALVKFNFQRSIPGIRMFQIQYNGTYDDSLVYR
MISPTSKSILVNNLAAGTNYDLCVLAIYDDQVTALTATRVIGCIHFTTEPQYLRCHFMQS
QFLGGTIVVIIGGIIVASVLAFIIFLIVRYRVCNQGDVDKALEMGDIRSLSSDGQLQGCG
IPKSLSKQVLRPEKNDKDSLRVALPPPEPAKQRPPAVVATTKPSVPDCTVSTSAASHSWH
PASPGAPRPKRFSAPPKPSEARRAEVQGDVELDNMNRNNSSEVKIATAVTLAVPGQPIKW
TAVPRAPRPHQAPQHYMTVPAGGVRVNRRHSLNADSYMERCYVAYPKTGASLRSKRSLSM
SGELPQLESTTNIHRARDKLSRSEWLLESTL
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgtttcatctgcaaggtgtattaagccaactgaaaagccaaatggagtctctcctggtg
tatctgatagtcctcggtgtggctgtgaaggcccacaaagttcaagtctgccccaaacgc
tgcgtctgccaggtgcttaaccccaacctggcgactttgtgcgacaaaaaggggcttctc
tttgtgcccccgaacattgacaggcacacggtggagatgcgtcttggggataactttgta
accagcatcaaacgcaaagactttgccaacatgaccaagctggtagacctgaccctctct
cggaacaccattggctccatcgctcctcatgctttcaaagacctggagaacctgcgagcc
cttcacctcgatagcaaccggctaacccgcatcaccaacgacaccttcagcggcatgtcc
aagttgcaccacctgaacctcaacaacaaccagctcacccacatccagattggggctttt
aatgatctgaccgcgctggaagagctggacttatcctacaacaacttggaaagtgcgcca
tgggtggccattcagaggatgtccaacctccatactctcaatctggaccacaacatgctc
agccacatcccagagggcaccttctctgggctgcagaagctcaagaggctagacgtgact
tccaacaagctccagaagcttccccctgaccctattttccaaagagcaggggtcctggcc
acctctgggataatgggacctttgtcgttcgcactgagctttggagggaacccactgagg
tgtaactgtgagctgctctggctgcggaggttgcggagggaggatgatctggagacctgt
gcctcaccgcaacacctcgccggacgctatttctggactgtttcagaggaagagttcctg
tgtgagcctcctctcatcaccaggcactctcaggaactgcgagctttggagggtcagagt
gttactctgcgctgtaaggctaggggggaccccgaccccattatccactggatcgcccct
gacggacgccttatgtccaactcctccagggctgcggtccacacagacggcacgttggac
atcctcatcagcactgtcaaggattccggttccttcacctgcgtggcctccaacccggca
ggtgaggcccagcagacggtggagctggtcattgctaaactccctcacatcaccaacaac
acagtcgcagagcaggagcccgaccccggatcatcagatatcgccacagtgaccaagacg
gggcagaggcgggagggacctctggggaatgcaaagacgagccaggagaagaaagtagta
attgctgaggccacgtccacctcggccctggtcaagtttaacttccagaggagtattcct
ggaatacgcatgttccagatccaatataatggcacctatgatgattcactggtttacaga
atgatatccccgaccagtaagagcatcctggtaaacaacctggcggctggtaccaactat
gacctgtgtgtgctggccatctacgatgaccaggtgaccgcgctgaccgccaccagggtg
ataggttgtatccacttcaccacagagccacagtacctgagatgccatttcatgcagtcg
cagtttctcggtggcaccatcgtggttatcattggagggattattgtggcctcagtgctc
gcttttatcatcttcctcattgtgcgctaccgggtgtgtaaccaaggagacgtagataag
gctctagagatgggggatattcggtcgctaagcagtgatggacagctgcagggctgtggg
attcccaagtccctctccaagcaggtcctacgtccagagaagaatgacaaggactccctg
agagttgccctgccgcccccagagccagccaagcagcgaccgccggccgttgtagccacc
accaaaccctctgtccctgactgcactgtctctacctctgctgccagccacagttggcac
ccagcctccccaggtgctccaaggcccaaacgtttcagtgctccaccaaaaccctcagag
gctcgccgagctgaagttcagggggatgttgagctcgataacatgaaccggaataactcg
tcagaggttaaaatagccaccgctgtcactctcgctgttcctggccagcccatcaaatgg
actgctgttcccagggctccacggccccaccaggcccctcaacattacatgactgtgcct
gcaggcggagtgagggtgaaccgcaggcactccctaaatgcagactcatacatggagcgc
tgctatgtggcctaccccaaaactggggccagtctgcgctccaagcggagcctgtcaatg
agcggagagctgccacagctcgagagcacaacaaacattcaccgggccagggacaaactc
tccaggtctgagtggcttctggagagcactttatga
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