Micropterus salmoides (largemouth bass): 119909349
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Entry
119909349 CDS
T07309
Symbol
trim54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119909349 (trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119909349 (trim54)
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119909349 (trim54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-B_box
RING_XB3-XBAT31
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
zf-RING_2
Sina_RING
CC_BshC
COQ7
DUF5799
Zn_ribbon_FGT1_2
Aldedh
Motif
Other DBs
NCBI-GeneID:
119909349
NCBI-ProteinID:
XP_038583465
LinkDB
All DBs
Position
Unknown
AA seq
367 aa
AA seq
DB search
MMNLALGYKPPSAGSSGPGAGRGATMDNLEKQLICPVCLEMFSKPVVILPCQHNLCRKCA
NDIFQSINPLWQSRGPSSVATSGSRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDLYRQ
QESSRLVNIKPEQRQLMCEEHEEEKINIYCLSCETPTCSMCKVFGEHKDCDVAPLSNVYM
KQKTELSDGIAVLVASNDHIQAVISQMEEICRTTEENGQRQREHLANQFDRLVAILEERK
QELVGLITKQQDEKLKHVRSLIRRHSDNLEAAVMLVESAIQSMEEPHMPLFIQSAKVILE
KMAATARASDIERLELGYESMSHFAIDTDDIAVTLMNIDFCPGVGDDGEEDPEEGEEESD
LDFCSRH
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacttggctctcggctataagcctccgtcagcaggcagttctgggcctggcgct
ggcagaggagccaccatggataacctagagaagcagctgatctgcccagtctgcctggag
atgttctccaaacccgtggtcatcctgccctgccagcacaacctttgccgcaagtgtgcc
aacgacatcttccagtcaattaaccctctgtggcagtcccgcggcccctccagcgtggct
accagtggcagccggtttcgctgtccgtcgtgccgccatgaggtggtgctggaccgccat
ggaatctacggtctgcaaaggaacctgctggtggagaacatcatagacctttacagacag
caggagtcctccaggcttgtgaatataaagccagagcagcggcagctgatgtgtgaagaa
catgaagaggagaagattaatatctactgcctgtcctgtgagacgccgacctgctccatg
tgcaaagtgtttggagaacacaaggactgtgatgtggctccgctcagcaacgtctatatg
aaacagaagactgagttgagcgacggcatcgcggtcttggtcgccagtaacgaccacatc
caggcagtcatctctcagatggaagaaatctgccgcactacagaggaaaatggtcagcga
cagagagaacatctggctaaccagtttgacagactggtggccatcttggaggagcggaag
caggagctggtggggctcattaccaaacaacaggacgaaaaactcaaacacgttcgatcc
ctcattcgacggcacagcgacaacctggaggccgcagtgatgctggtggagtcggccatt
cagtcaatggaggagccacacatgcctttgtttatacagagtgccaaagtcatactggaa
aaaatggcagcgacagcaagggcctctgacattgagcgtctggagctcggttatgagagt
atgagtcacttcgccatcgacaccgacgacatcgccgtcacgctgatgaacattgacttc
tgccccggtgtgggagatgatggagaagaagatcctgaagaaggagaagaagagtcagat
cttgacttctgctccagacattaa
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integrated database retrieval system
