Micropterus salmoides (largemouth bass): 119909364
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Entry
119909364 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1B-like
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119909364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119909364
03021 Transcription machinery [BR:
msam03021
]
119909364
03036 Chromosome and associated proteins [BR:
msam03036
]
119909364
Transcription factors [BR:
msam03000
]
Eukaryotic type
Helix-turn-helix
ARID
119909364
Transcription machinery [BR:
msam03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119909364
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119909364
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
119909364
NCBI-ProteinID:
XP_038583479
LinkDB
All DBs
Position
Unknown
AA seq
2015 aa
AA seq
DB search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NT seq
6048 nt
NT seq
+upstream
nt +downstream
nt
atggatgccagcctgggttcagccaccaacacctccaacaacaaccctcctccgagcggg
accgagtttaatcattattatgggaatggaagaggagggccttgcttcgatcaacatggc
ggacaacaaagaccagggactcgggtaataagagcggcgcactcggtactcaacgctatg
gatcaggttcagaactcccacgaagggtacaacaacaacagcccgtataaccactacccg
aactatcggcccggctacgggaacagcgggtacggcggcatgatgagcccctcgcggccg
gggaacaacctgctgggcccgggcagctcggccgctgctaaccacagcaaagcggcgatg
gccgctaccagcgccccggcaggagctgctgcaggcggcggcggcggcaacaacggcggg
ttccagcggttccccggaccgggccagcaccagcagctgcacccgtccggagccacgccg
actctgaatcagttattgacctctccgagcaccatgatgcgcggttatggaagtggatat
gcagattataataatcctcctcccgcacagcagcagccgagcctggggctggctaaagag
ctgcagtacggctgggccggacagagaaaccacccggccatgagcccggggaacaacggg
cagggcggcggcagagccccggtgccgccgctggacccgacggcgatgaagcgctctcag
ctctacagcatgagctcccacccgtactcccagcagcccggggaggcgtactccggccag
ccgtacgcctcccccgggccccacagatacccgatggggatgcccagcagaggccagatg
gggatgggcgggatgcagtacccgcagcaacagatgggctctcagtacgctcagcagcag
cagcagcagcagcagcagcagcagcagcagagcgtgggaggctacggtcagccgggtcag
ccgccgtacttcagccctccacagcagcagcccgccgccccgagccagccgtcctacatg
cagccccgcccactgccacagcaggaggtgccgcaggaggcgtacggggggcggggccag
tctgccgccatgactcctgggaagccgaaccacgaggagatgggtctgagccaacaggag
cggccgtccagcctgccggatttgtccggctccatcgatgaccttcccaccggcaccgag
gcggcggtgagttcaggggtttcgggctccggcagcgctcagggcgaccaggggaccccg
acccgttctcctttctccccccacgtctcaccgcgactccccccgccagctcgcaccggg
ccctccccctccccttcaccgtcccccgccgggtccagcagccaatcgcgatccggacct
ctgtcccccgcccccagcggaccaggctctcagatgacccctcaggtctctggtcctggt
tcagacggcggtcctcatccctctgccgtgactcaggaccgaggtttccctccctccatg
cagcgtagcgcccaggggcctcagtttggccctcagcagtcagcaccacccatgtcccct
cacccagcctcggggggacccatgcaccacggctcctaccagcagggcggctcatatggc
cagtacgggcccccaggtaactaccctcggcccccgcactatggcggggcccccagtgcc
aactactgcggccctggaccgggtcccggcttagccaacagcttggggttgaacgccagc
agtcccatgcacggtcagggcccgtccaccccggcaggtcgcggcccgggacctggcccc
gggagccggccttaccccgccggaggaagctccatggcccccacctcccccggcatgcca
cagcccgccgggcagggcatggggcctccggggcccaacgcgagccgcaaactgcttgag
gtcggccccaacgccgggccgtcgtcctcctcctcgacctcagccgcccagggcaggcag
ggaagctacctgggcatggcgccaatggcaggaatgggccctggaggccccggaggtccc
tacagccagcaaccaggcagcaactctgggaggatgacgccgcagggaccgccctacggc
gccccgtcctcaggccccatgatgctgcaggcagaggggatgggtccccatctagacgcc
aagcagagggttgagctcagcaaagacggcgtcggccccgcctccgaaccacccaaaccc
aaggacggctacagcgctcagtgcgtgtccaagccccccacgcactcccccatgtccccc
cgctcagctagtctgtcctcctgcgatagcgttagcagccccgcctggcccaagacgtcg
accagccccaagtccggcatggccaccacgaccaacgaggacgtcgcccagctctacgag
atgggctcggagccggagaggaggccctgggtggaccggttcctgtcgttcatggaggag
agggggacgccggtcccaacccttccggccgtggggaagaaacctctggacctgtgcaga
ctgtacctggctgtgagagagatcgggggcctggccatggtgaacaagaataagaagtgg
agggagctgtcgtcccagctcaacgtggggacgtccagcagctcggccagctctctgaag
aagcagtacatccagtacctgttcgcctacgagtgcaaggtggagcgaggagaggagccc
ccacctgaggccctggggcccgccggagacaccaagaaacctctgtcactccaggccaag
atccagccaccgtccccagccaactcgggctccctgcagggccccaacacccctcagtcc
agcagcagctccctggccgaggcccccggagacctgaagcccccgaccccggcctccacc
ccgcacagccagatgggtccccagcccggaaacaggaacttggcaggagtgagcgtccag
gacccgttctctgaaggcagcgatccggccttccacagcaagcgaggcccggggcccggc
tgccccccctaccagcagggaggagggccgacagacccctcactgaggatgcagtacgac
gccaacaaagacccgtacggagggtcgaggaaaggtccggggcccggcgaggcctttggt
cccggtcagatgcccagcggtgccatgcaggacatgtacccccgcgggccgccgtctggg
cccctgacgggcatgggccccagaccccagtacccctacggccccggctacgagcggagg
ccggaccacgtgatggcgccggaggcaggcatggcgccgcctggaggtcagaacagcatg
ggtccatctggaaacgacgccggcatgtaccccgccaacagataccccccccagaggcac
ggacacgacgggtacgggcagcagtatcctcacagcgtggcctacacttcccatcagccc
ctgtaccctcagcagcagggatacaagcgtccaatggagggtctgtatcctccggcgaag
cgccacgagggcgaacccttcgccgctcagcagtttggccctcagcagcctgacatgttc
ggccccttcggtggaggaggcggaggctacatgggccctgagcggcggcctgtccagggc
cagttcccgtatccgtatgctcgggatcggcaggggcccctgcagcacagcatgataggc
tcaggaccggcggcggtgtcagggggccctggggaggggccgcaggccaacatgtggcac
cccaggacagacatgggctacacgtacagccggcagggccaggggcccccctatcctggc
atggggcgaggagatgaccaggagggcagggccccccaggacagccagtgggcccccagt
catccaggccaacgccagccaccgtaccccccccactcctctccgtcctcctcctctccc
tccatgccccccctgtcctccagacagcccccctcccccttccagaccacgcccaccaac
cacgtgacccgctctcacagcccctcctccttcccccggcccctggggggctcgctgtcc
cccaacagcgccccctacctgccctccatgaagaagctcccccacggccccccgcccact
cagggcctccagctcatcaacagagaggtcagcttccctcccagctctgtggaggccacg
ccccccaaactgaagccccgacgccggctcaccgccaaggacacgggaacaccggaggcg
tggcgggtgatgatgtcactgaagtccggcctattagcagagagcagctgggccctggac
accatcaacatcctgctgtacgacgacggcaccgtgggctccttcagcctcacacagctc
cctggtttcctggagctcatcgtggagtattaccgccgctgcctcatccagatcttcggt
atcctggaggagtacgaggtgggggccgagggccagaggaccctgctggggcccctgctc
gaccctccagagatggagaaggtgctgaaggagccgccagccgccgcctcctcctccgag
tccaacggccaatcacccgaggagcagaggacgccgccgctgctcacagctgcaccggcc
gtcgacgccaaagagggcgaacctgtcgtcaaagaggaggtggtggtgaaggaggagcgc
gaggagcaggcagagccccgccccaagcaggccagcaagtacgacaagctgccaatcagg
gtggagaagggggaggagtgggaggaggtggaggagcgctgggccgagctcggccgaccc
aacggcttcatcagcggcctcctgcactggagggccggaggcggagacaccaccgcccac
atcctgacgggagactccaccccctccaaaccggcggggaagagtcaggagagagcggga
ggagctgagacgcagaaggaggagggaggcgtggcgcccggcgaggagacgcagcctgaa
acaggtgaggagcaccaggagcccacagctgcagtttaatcacgtgataaatcgattctg
atgtctgatctctgagcgtttctctctgcaggctcgccgtctgaggtcagaggtcagaag
tcgccggctcagagtcccatcagccagctggaggacgagccgcgctgctgggacgaggcg
ccgctgtccaccgccgaggcctggcaggactctctggcccggcgctgcctctgcgtctcc
aacatcgtgcgcggcctctccttcgtacccggaaacgacgccgacatgtcgcggcacccg
ggcctggtgctgatcctgggccggctggttctgctgcaccaccaccacccccgcaggaaa
cggacgccggccagctaccagcgggaggaggagcagggtctggcctgcagccgggacgag
tggtggtgggactgcctggcggcgctccgggagaacacgctggtgacgctcgccaacgtg
gcgggccagctggacctgtcgctgtaccctgagaacatctgcctgccgctcctggacggg
ctgctgcactggatggtgtgcccgtccgccgaggcccaggacccgttctgcggcgccgcc
tcctcgctgtcgccgcagcgcctggtgctggagtgtctgtgcaagctgagcatccaggac
tgcaacgtggacctgctgctcgccacgccgcccttcagccgccagcagaagctctacgcc
acgctggtgcgcctggtgggcgagaggaagagccaggtgtgtcgggagatggcggtggcc
gtcctgtccaacctggcgcagggcgaccccacggcggcgcgcgccatcgccctgctgaag
ggcagcgtgggaactctgatcggcttcctggaggacagcgtggccatggctcagtaccag
ctcagctcgcacagcgtgctgcacgccgccgcgccgccggagccgcccagcgtcaacatg
atgtgccgcgccgccaaggcgctgctggccatggcgagggtggaggacaaccggacggag
ttcgtcctgtacgagagccggctgctggacatctcgctgtcggccgccctcagctcctcg
gtggcggccgtcatgtgcgacgtactgtttaaactcggccgctcgtga
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