Micropterus salmoides (largemouth bass): 119909936
Help
Entry
119909936 CDS
T07309
Symbol
ubr1
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119909936 (ubr1)
Enzymes [BR:
msam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119909936 (ubr1)
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
119909936 (ubr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRT6_C
UBR1-like_wing
zf-UBR
ClpS
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
119909936
NCBI-ProteinID:
XP_038584145
LinkDB
All DBs
Position
Unknown
AA seq
1739 aa
AA seq
DB search
MAEGEKSLDGLELSKEWLEAADSRAELLRYLKEQVPQIFCLKKESSPQEEEELMQSRLLR
PLECFLFGEDPQEGLEKLKQGSTSSQLCGRVFKEGETVYSCRDCAIDPTCVLCMDCFQDS
VHKSHRYKMHASSGGGFCDCGDVEAWKIGPCCSKHDPGAATAMVTDEHGLEPELYERTEK
LFRLLLQYVTDFLVWEENLELSAELQPRTKDNAYYCVLYNDEHHSYDHVIYTLQHSVNCN
LAEAQTHTALIDKEGRRAVKRGTLRSCQQAKDLIRSNSEHISLQPLRVEILHAAVMAHQT
FALRLGSWFQRIISYSVGFRQAFCQVALETDANGDQPCLISRLMLHDARMYKGARKIVHE
LIFCSMLMETEFKRLFAIEFTKHFKQLQKDFINDDHERSISITALSVQIFTVPTLARQLI
EEVNVIKVIVDTVMELLREQLDGNNRFFFLGYNSDKFSRIQVIFHDLRYILISKPLIWTD
ELRTEFMEGFKVFLGFLKCMQGMEEVIRQSGQHIAVEPEWEAGFSLQIQLRHILAMFQDW
CSSDDEILLFAFKECHKVLMQCNNQPFHKKATDNYTCKHILHVCPYRVSQEPVSIHLPIS
RLLAGLYVLLCRTGAIERLEDPESYDYTQLAEHPLRCVVLAAQVSAEMWRRNGLSLVSQV
YYYQDVKCRDEMYDKDILMLQIAASKMDPNHFLILILLRFELLDYFNGSCSSKDQDELTQ
WNRLTEEMLFLIIVIVGERYVPGVSQVTKEDVTMREVIHLLCIEPMAHSSLIKGLPENES
HGTDLETVIARVATFRKPGVSGHGLYEVKKECLAEFNPFFYHYSRSQHSKAEESQKKRRT
QESNDKALRPPVPPAFCPAFSSIVRVLCCDIIVHILRRVLERAAEDRATHWTEAMIQRAL
HLIGQALLEEKTQLEDSTVEEVTFDFSQKARKIDSEHSKSLFVLLSKIMAVPSLEAQKDM
IKWVLRMFEIVKCLREKSSPTASVSMETTKPEESAQDKEKAERKRKAEAAKLHRQKIMAQ
MSAMQKNFIESNKMLYDNMPESGTQGEPVTTTDSCAIEQMELCVAIGPHRGSTPAEREVL
TCILCQEEQEVVAQAQAMVLTACVQRSTVLTQCRGKIPTNREDGTSYPVFMPPELAVGTH
TGSCGHVMHATCWQKYFEAVQNTTRNRLHAELIIDLENGEYLCPLCKSLCNTVVPLIPLE
PLMFNYENAEIIGQHLTLPRWIQIFSARIKGLKSVTQDNDCNTEGSGVDGDVGMCAEGQP
DFRSILSYGVQEPRKFSDSIVEMLVVCATTVHRVGLQTAPNELCPRVPLMTWNTCAFTIQ
AIENILQEEGKPLFGSLQNRQLAGLKAIVQFSAAQRLKSSQAVIQRHFADMLGVLLPVMS
RKNTPSLLEVDFFHLLVGLVLSVPSLYQEEAVDLQPSAVSSAYNHLYILHLVTMAHILQI
LLSSTDFPAIVGGEETEEARAAVELCTTVSQHTGRPIPDVSGSSVAERVKTGIEPFLRCA
ALFFNCLTGVHPPEELLSTAVTHQGQMEALCSYLALPPNVFQLFQEHREPVTPLVQRWCG
NPAVTKALKGKLQTIRYPRRRNRLIDLPEDYSALLNQASHFKCPKSTDDERKHPTLCLFC
GAMLCSQSSCCVTQLDGEDVGACTAHAATCGAGVGMFLRIRECEIVLMASKTRGSTYPAP
YLDDYGETDPHLGRGNPLHLCPERYRKLNQLWQQHCILEEIARSLEVVNVMFAFEWQML
NT seq
5220 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggtgagaaatccttagacggactggagctcagcaaggaatggctggaggct
gcagacagcagggcggagctgctccgctatctgaaggagcaggtgccgcagatcttctgc
ctaaagaaggagtccagcccacaggaggaagaggagctcatgcagagccgactcctccgc
cctctggagtgtttcctgtttggagaggatccccaggagggtctggaaaagctcaagcag
ggcagcacctcctcccagctctgtggacgtgtcttcaaagagggagagactgtctactcc
tgcagggattgtgcaatagatcccacttgtgtcctgtgtatggactgcttccaggatagc
gttcacaaaagccatcgctacaagatgcacgcgtcatcaggcgggggcttctgtgattgt
ggggatgtagaagcctggaagattggcccctgttgctccaaacacgacccaggggcagcc
actgccatggtaacggatgagcacgggttggagcctgaattatatgagcgcactgagaag
ctgttccggttactgctgcagtacgtcacagatttcttggtgtgggaggagaacttggag
ctgtcagctgaactccagccccggacaaaagacaatgcatactactgtgtactgtacaat
gatgagcaccactcgtacgaccatgtgatctacaccctgcagcattctgttaactgtaat
ctggctgaagcacagacacacacagcacttattgacaaggagggtcggcgagcagtaaag
agaggaacccttcgttcctgtcagcaagcaaaagatctcatcaggtccaactcggagcac
atttccctgcagccactacgtgtggagatccttcatgcagcggtaatggctcatcaaact
tttgctctgcgcctcggctcctggttccaaaggatcatcagttactcagtgggcttcagg
caggcattctgtcaggtggcactagagaccgatgcaaacggagaccagccttgcctaatc
agcaggctcatgctgcatgatgccaggatgtacaaaggagctcgcaagatagtacatgaa
ctgattttctgtagcatgctaatggagaccgagttcaagaggctttttgcaattgagttt
acaaagcactttaagcagctgcaaaaggacttcataaatgatgaccatgagaggagtata
tccatcactgctctctctgttcagatattcactgtgcccacattggccagacagctgatc
gaagaggtcaatgtcattaaagtgatagttgatacagtcatggaattgctgcgtgaacaa
ctggatggcaacaatcgcttcttctttcttggctacaactcagacaagttctcacgcatc
caggtcatcttccacgacctcaggtatattctgatcagtaaacccttaatatggactgac
gagctgcggacagagttcatggaggggttcaaagtctttcttgggtttctcaaatgcatg
cagggtatggaggaggtgattcgccagtctggtcaacacattgcggtagagccagaatgg
gaagccggcttttctcttcagatccaacttcgccacattcttgcgatgtttcaggactgg
tgttcctctgatgacgaaatcttgctgtttgcatttaaagagtgccacaaagtcctgatg
cagtgcaataaccagccctttcacaagaaggccactgacaactacacttgcaagcatatc
ctccatgtttgtccatacagagtgtctcaggagcctgtcagcatacatctgcccatctcc
aggctacttgctggcctgtatgtacttctgtgcagaacaggggcaatagaacgtctggag
gatcctgagagctatgactacacccagttggctgagcatcctctgcgctgtgtggtgctg
gctgcacaggtctcagctgaaatgtggcggcgtaacgggctctctctggtcagccaggtc
tactactatcaggatgttaaatgcagggacgagatgtacgacaaggacattctcatgcta
cagatagctgcttccaaaatggaccccaaccacttcctcatattgatcttgttgagattt
gagctcttagattattttaacggaagctgttcaagcaaagaccaggatgaactcactcag
tggaatcgtctgacagaagagatgctgtttctcattatcgtcatcgttggtgagcgctat
gtccccggtgtcagtcaggtgaccaaagaggacgtgacaatgcgggaggttatccacctg
ctgtgcattgagcccatggctcatagtagcctgatcaagggtctgccagagaacgagagc
catggaacagacctggaaactgtaattgccagagttgccaccttcagaaaaccaggagtt
tcaggacatgggttgtatgaagtaaaaaaagagtgtctggcagaattcaaccctttcttt
taccattattcaagatctcagcacagcaaggccgaagagtctcagaaaaagaggaggact
caggagagcaatgataaagctctgcgtcctccggtgcccccagccttctgcccagctttc
tccagtatagtgcgtgtgctctgctgtgacattattgtccacatcctgagacgagtcctg
gagagagctgcagaggaccgggcaactcattggacagaagccatgatccagagggccctg
cacttgataggtcaggcattgcttgaagagaaaacacagcttgaagatagcactgtggag
gaagtgacctttgatttcagccaaaaggcccgcaaaatcgattcagaacacagcaagtca
ctgttcgtcttgttgtccaagattatggctgttccttcccttgaagctcaaaaagacatg
atcaaatgggttctgcggatgtttgagattgtcaagtgccttagagagaagtccagtcca
acagcctctgtgagcatggagacaaccaagcccgaagagagcgctcaggacaaggagaaa
gcagagcgcaaaaggaaggcagaggcagccaaactccaccggcagaagattatggcccag
atgtcagcaatgcagaaaaacttcattgaatcaaacaagatgctgtatgacaacatgcca
gagagcgggacacagggagagcctgttacaaccacagatagctgtgccatagagcagatg
gagctgtgtgtagccatcgggccccaccgagggtccactccagctgagagggaggtgctc
acctgcattctttgccaggaagaacaggaagtggtggcccaggcccaagccatggtactg
actgcgtgtgtccagaggtctacagtgctgacacagtgcagaggaaagataccgaccaac
agagaagatgggacatcatatcctgtcttcatgcctcctgaactggcagttgggacccac
actggcagctgcggacatgttatgcatgccacatgctggcagaaatattttgaggctgtt
cagaatacgaccaggaaccggctccatgctgaactgatcatcgacctggagaatggggag
tatttgtgtcccttgtgcaagagtctgtgcaatactgttgtcccgctcatcccactggaa
ccactaatgtttaactatgaaaatgcagagataatcggacagcatttgaccctccctcgc
tggatccagatcttctctgccaggattaaaggactcaagtcagtcactcaggataatgat
tgcaacacagaaggcagcggtgttgatggggatgtggggatgtgtgcagaaggccagcca
gactttagatccattctgagttatggagtacaagaaccgaggaagttctcagacagcata
gtggagatgttggttgtgtgtgccaccacagtccacagagtgggattgcagacggcaccc
aatgaactatgcccacgtgtgccccttatgacttggaacacatgtgccttcactattcag
gccatagaaaacatattgcaggaagagggcaagccactatttgggtccttacaaaacaga
cagcttgcaggtctgaaggcaattgttcagttttcagcagctcagagactaaagagctcc
caggctgtcattcaaaggcacttcgcagacatgttgggggtcttgctgccggtcatgagc
agaaagaacaccccttctcttctagaggttgacttcttccatcttctggtagggttggtc
ttgtctgtaccctcactgtatcaggaggaggctgtagacctacagccgtctgctgtcagt
tctgcctacaaccacctgtatatcctgcatctggtcaccatggcacacatattgcagatc
ctcctgtcttctacagatttccctgcaatagtgggtggagaggagacagaggaggcgaga
gcagcagtcgagctgtgcactaccgtgtcacaacacactggaaggccgattccagatgtt
tccggcagctctgtggctgaaagagtaaagacgggaatcgaacctttcctgcgctgtgct
gctctctttttcaattgccttacaggagtacatcctccagaggagcttttaagtactgct
gttacccatcaaggacagatggaggcactatgtagctacttggcactcccccccaatgtg
tttcagctcttccaggagcacagagaaccggttactccactggtgcagaggtggtgtgga
aacccagctgtaaccaaagccctgaaaggcaaactccagacaatcagataccctaggaga
aggaatcgtttgattgatcttccagaggattacagtgctctcctcaatcaagccagccat
tttaagtgtcccaagtctacagatgatgagaggaagcatccaactctgtgcctgttttgt
ggggccatgctgtgctctcagagctcctgctgtgtcacccagctggatggggaagatgtg
ggagcttgcactgctcacgctgctacttgtggtgctggagttggcatgttcctcaggata
agagagtgtgaaattgtactgatggccagtaagactcgaggaagcacatacccagctcct
tacctggacgattatggggaaactgatcctcaccttggaaggggcaatccattgcacctt
tgcccggagcgctacagaaagctgaaccagctgtggcagcagcactgcatcctggaagaa
attgcccgcagcctagaggtggtcaatgttatgtttgcctttgagtggcagatgttgtga
DBGET
integrated database retrieval system
