Micropterus salmoides (largemouth bass): 119910106
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Entry
119910106 CDS
T07309
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03013
Nucleocytoplasmic transport
msam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119910106 (srrm1)
03015 mRNA surveillance pathway
119910106 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119910106 (srrm1)
03041 Spliceosome [BR:
msam03041
]
119910106 (srrm1)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119910106 (srrm1)
Spliceosome [BR:
msam03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
119910106 (srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
119910106
NCBI-ProteinID:
XP_038584430
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTEIL
GFEDDVVIEFIFNQLEEKHPDSKMMQINLTGFLNGRNAREFMKDLWPLLLSAQENIAGIP
SAFLEQKKEEIKQRQIEQEKLASLKKVDDDKKEKDKEMRERAQSKSPRRRKTRSPSPRRR
SPVKRERKRSASRSPRRKPSPVGGNSPPTPPLMPLPIKPLEQPEDLDAPGRAMPEPVIQE
TSSTCETVVEVVKADSVVEVKEPSPEKTQKKEERPRSREREKDSKRERPHHRSRSHSRSR
RRRSRSRSYSPRRRPSPRRRMSPRRRSPPRRGPPNSRQRHRRSPVRRRRSHSASSSGSST
SGSRSPKKAVKRISSTPPRKPIHHPDTSISPAGKDRRSPSPRARRGRGSPSPARSSGLKR
KPGGRGDSPSDNTKPRPSEGSESEEDKNEKGATADSVQQRRQYRRQNRQSSSDTGSSSSE
DEGPKRPAVGPGAKNGEVRRRRSRTPSPRRRHRDVSPRKRRSPSLGRRRRSPSPPRRRRS
PSPPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPLPPQKRRMSNSPTKRSSPGAKRRPS
RSPKRRSSPPQRRRTPPSSSSPPRHRRSPMLPSVRPSRDTRSPVAAASRTVRGSTSPQGR
FETFNTSPSNQRRQSPSHSGKPIRRVSRTPEPRNSQRPSLSPQPMRRASSRSRSVSPRPA
ALKRPAPASASPSPSRSASVSPPPAKKASSGSGSQSPNKNSDVDGSGKKKKKKKEKKHKK
EKKHKKHKKHKKEKSTSGTATGDGQENQGVEEDGESRKESDSEVDDTLDDLEKHLREKAL
RSMRKAQMSPSQMS
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggtacaagtgcggagcaagacaaccgtttcagcaacaag
cagaagaaactgctgaagcagctgaaatttgcagaatgtctggacaagaaggtggacatg
accaaagtgaacctggaagtcatcaaaccttggattactcagcgagtgacagagattctg
gggttcgaagatgatgtcgtcatagagttcatatttaaccagcttgaggaaaagcaccca
gatagcaagatgatgcagatcaacctgacaggcttcctgaatgggaggaatgcccgggag
ttcatgaaggatctatggcccttgctgcttagtgcccaggagaacattgctggcatcccg
tctgcttttctggaacagaagaaagaagaaattaagcagagacagattgaacaggagaag
ctagcttctttgaagaaggtcgatgacgataagaaggaaaaggacaaggagatgagagag
agggctcagtcaaagagcccaaggaggcggaagacgaggtcaccttcaccacggcgaagg
tcgccagtgaagcgggaaaggaaacgtagtgcctcacgctccccgagacgcaaacccagt
ccagttggtggcaattcacccccaactccccccctgatgccgttgcccattaaacctttg
gagcagcctgaggacctagatgcaccaggaagagccatgccagaaccagttatacaagaa
acctcttccacctgtgagacagttgtggaggtggtgaaagcagactcagtggttgaagtg
aaagaaccttctccagaaaagactcagaagaaagaggagaggcccaggtcccgggaaagg
gagaaggacagtaagagggaaagacctcaccaccgttctcgttctcattcccgctcgcgc
cggcgacgctcccgctctaggtcctactcccctcgtagaaggccgagtcccaggaggaga
atgtctcctcgtcgaaggagcccccccagacgtggcccacccaactccagacaaaggcat
agacgctcccctgtccgcaggaggcgctctcactctgcttcatcctctggcagcagcaca
tccggctctcgctcgcctaaaaaagcagtgaaaagaatatctagcacaccaccccgaaaa
ccgatccatcatcctgacacttccatcagccctgcagggaaggacagacgatcaccatct
ccacgggccagaagaggcagaggctctccatcaccagcaagatcatctggtttaaagcga
aaaccaggaggaaggggtgattctccatctgataataccaagcctagaccttctgaaggg
tctgagtcagaggaggataaaaatgagaaaggggcaacagcagattcggtgcagcagcga
cgtcagtatcgcaggcagaatcgacagtcttcttcagatacagggtcttcctcctcagaa
gacgaggggcctaagaggccagcagtggggccaggcgccaaaaatggtgaagtcaggagg
agacgtagccgtacgccctccccacggaggagacacagggatgtctccccaaggaaaaga
cgttctccatctcttgggcgcagacggcgctccccttctcccccacgacgtcgcagatct
ccttctcctcctagacgaaggtctccttccccacctccccgccgtcgctctccatctccg
agacgatattctccccctatccagcgtcgctacagcccctcccctttgcctccacagaag
aggaggatgtctaactctcccacaaagcgctcttctccaggggccaagcgacgcccctcc
aggtcccccaaacgcagaagttctcctcctcaaaggagacgcacacctccatcctcctca
tctccacccagacacaggaggagccccatgttgccttctgtcaggccaagcagggataca
cgatcccctgttgcagcagccagccgcactgttaggggttccaccagtcctcagggacgt
tttgaaaccttcaatacatctccatctaaccagcggagacagtctccttcacacagtggc
aaacccatccgcagagtgtcccgcacgccagagccacgcaacagccagagaccatctctg
agtccccagcctatgaggagagcatcctctagatccagatcggtttcccctcgaccggca
gctcttaaacgtccagcccctgcatctgcctccccttcaccatctcgctcagccagcgtg
tctccaccaccagccaaaaaggccagcagtggttccggcagtcaatccccaaacaagaat
tctgatgttgacggcagtggaaagaaaaagaaaaagaagaaggaaaagaaacacaagaaa
gagaagaaacacaagaagcacaagaagcataagaaggagaagagcaccagtggcactgcg
actggagacggacaagaaaaccagggtgtggaggaagatggcgagtcaagaaaggaatca
gacagtgaagtagatgacaccttggacgacctggagaagcacctacgagagaaggccctg
cgctccatgagaaaggcccagatgtctccatcacagatgtcctga
DBGET
integrated database retrieval system
