Micropterus salmoides (largemouth bass): 119910117
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Entry
119910117 CDS
T07309
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msam03036
]
119910117 (msh4)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Meiosis-specific proteins
Others
119910117 (msh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND3
ATPase_2
AAA_30
Motif
Other DBs
NCBI-GeneID:
119910117
NCBI-ProteinID:
XP_038584446
LinkDB
All DBs
Position
Unknown
AA seq
919 aa
AA seq
DB search
MFRSSTEEVSTGGDTSECGQTGGVSSMDRSGLNETTSYGPESASSGSSHQSLYEGSSSSS
HGPSLPVMASGQFHYSFRMDKTISSLHAYASDNSPLRSHRETPRLRRTLGSHPSRTPLTD
PTATSCSSATTTCGASVIVAMVEGRGLARGEIGMASLNLKCPELVLSQFADTGTYAKVIT
KIHILVPLEILMPDTASEKGKGTKLFNLITGNFPGVAFTAIQRKYFNERKGLEYIQQLCA
PEFGTVRMEVQAKYYCLAAAAALLKYLEFIQNSVYAAKSLKVSFKGSEQTAMIDSTSASN
LELVVNNRDHRSEQSLLGVLNHTKTPGGARRLRSNILEPLVDVDTINIRLDTIQELLQDE
ELFFGLKTAIGNFLDIDQLLSVLVQIPKQETVQIAEAKITHVIQLKHTLDLVPRLRMVLK
NCNTALLKAYSTSLEDNRFGMILEQIKTVINDDTTYLKGSLNMRTQKCYAVRPNINEFLD
IARRAYTEIVDDIAGLVNQIGEKYSLPMRTSFSTVRGFFIQMRLEGVVLPEGKLPPEFIK
VTKHKNNYGFTTVDLVKMNDRCDEALREIFHMSYVVICQLLSTVHEHIHCLYKLSDAVSM
LDMLLSLANACTISDYVRPEFTDTLAIKQGRHPILERMAGQQAVSNNSYISEGNNFVIIT
GPNMSGKSTYLKQVALCQIMAQIGSFVPAEYASFRIADQIFTRIGVDDDFETNSSTFMLE
MKEISYIIHNISDRSLIIIDELGRGTSAEEGIGICHSVCEFLLSLKAFTLFATHFLELCQ
LEALYPNVENQHMEVQHTRSGDTGDEGVVYTYLLNRGCSEERHYGLKAAEMTSLPSNIIQ
EAKTIASNVSQQLLAKHHSDPETQRQRAVYHLATRLLQTAKNSRLDPDSLRMYLKGLKKQ
YEADLQAAGQPASNDTEEE
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgcagcagcacagaagaggtatcaaccggcggggacacctcagagtgtggacaa
accgggggcgtgtcctctatggacagaagcggactaaatgaaactacctcgtacggtccc
gaatcagcttcctccggttcctcccaccaaagtttatatgaaggcagtagcagctccagc
catggtccatcactccccgtaatggcctcaggccagttccattacagcttccggatggac
aagacaatttcatcactccatgcatatgcctcggacaactcccccctccgcagccataga
gaaacaccgagactaaggaggacccttgggtcacacccttcaaggacaccactcactgat
cccactgcaacaagttgctcctctgcgaccacaacctgtggtgcctctgtgattgtggca
atggttgaagggcgaggtttggccaggggagagattggcatggccagtctcaacttgaaa
tgtccagagcttgtactctctcagtttgcagacactgggacatacgccaaggtcataacc
aagattcacatcttggtgccactggaaatactgatgccagacacagccagtgagaagggg
aaagggacaaagctgttcaacctcatcacagggaacttcccgggtgtagccttcactgct
atccaaaggaagtattttaatgagaggaaaggactggagtacattcagcagctgtgtgct
ccagaatttggcacagtccgcatggaagtgcaagctaagtattattgcctggcagcagca
gctgctttgctgaaatatttagagttcatccagaactctgtctatgctgccaagtctctc
aaagtgagctttaaagggagtgaacagacggcaatgattgactcaacatctgcctccaac
ttggagttggtggtcaataatagagaccacaggagtgagcaaagtcttttaggggtgctt
aaccacactaaaacacctggtggtgctagaaggttgcgctccaatattctggagcctctg
gttgatgtggacaccatcaacatacgtttggacaccatacaagagctgctccaggatgag
gagcttttcttcggcctgaagactgccataggtaacttcctcgacattgaccagcttctc
tctgttcttgtccaaatcccaaagcaagaaacagttcaaattgctgaagcaaaaattaca
catgtcattcagctgaaacacacattggatttggtgccacggttaaggatggtgttgaag
aactgcaacacagctctacttaaggcatacagcacctcattggaagataacaggtttggc
atgatcctagagcagatcaagacagtgatcaatgatgacactacctacctgaagggaagc
ctgaacatgcgcacgcagaagtgttatgctgtccgccccaacatcaatgagttccttgac
attgctcgcagagcttacactgagatagtggacgacattgcaggactagtgaaccagatt
ggggagaaatatagtttgccaatgcgtaccagcttcagcaccgttcgaggtttcttcatc
cagatgaggcttgaaggagtggtcttacctgaagggaaactccccccagagtttatcaag
gtaaccaagcacaagaacaactatggcttcactactgtggacctggtgaagatgaatgac
cgctgtgatgaggccctgagggagatctttcacatgtcctatgtggtgatatgccagctg
ctgagcactgtccatgagcacattcactgcctttacaagctctctgatgctgtttccatg
ctggacatgttgctgtctctggccaatgcatgtaccatctcagactacgtgcgtccagag
ttcacagacacactggccatcaagcagggtcgtcaccccattttggagcgaatggctgga
cagcaggctgtatcgaacaatagctacatctccgagggcaacaactttgtcatcatcacc
ggtcccaacatgagcggcaagtccacctacctcaaacaggtggcgctgtgtcagatcatg
gctcagataggctcttttgtccctgctgagtatgcctcttttcgtattgctgaccagatt
ttcaccagaattggtgtggatgacgattttgaaactaactcttccaccttcatgttggaa
atgaaggagatctcttacataatccacaacataagtgaccgatccctaatcatcatagat
gagttggggcgtggaaccagtgctgaggagggcatcggaatttgtcactcagtttgtgag
ttcctccttagcctcaaggcgttcaccctgtttgccacacactttcttgagctgtgccag
ctagaggctctctatcccaacgtggagaaccagcacatggaggttcagcacacacgcagc
ggtgacactggggatgagggtgtggtgtacacatacttgcttaatcgaggatgctctgaa
gaaagacactatggtctgaaagcagcagaaatgacttcacttccttcaaacataatccaa
gaggcaaagacaattgcctccaatgttagccagcagcttttggccaaacatcacagtgat
ccggaaacacagaggcagagagctgtgtaccacctggctacccgcctcctgcagactgcc
aagaactccagactggacccagacagcttgcgtatgtatctaaagggcctgaagaagcag
tatgaggcggacctgcaggcagcagggcagccagcgtccaatgacacagaggaggaatga
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