Micropterus salmoides (largemouth bass): 119910125
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Entry
119910125 CDS
T07309
Name
(RefSeq) TATA box-binding protein-like 2 isoform X1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119910125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119910125
03021 Transcription machinery [BR:
msam03021
]
119910125
Transcription factors [BR:
msam03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
119910125
Transcription machinery [BR:
msam03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119910125
RNA polymerase III system
TFIIIB
119910125
RNA polymerase I system
SL1/TIF-1B
119910125
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
119910125
NCBI-ProteinID:
XP_038584458
LinkDB
All DBs
Position
Unknown
AA seq
313 aa
AA seq
DB search
MVLHSWTSLRWSDTLMTPLQMTPASVWGRSWASRAPPTLHPAGSRGRSLTSASYLMTSAR
RTRRGVTMTQQRVRLQLWTCLRTGVCLDYNSQGSTAADPQQGSSVSGLGTGASPFCAMTP
MTPMTPMTPVTERSGIIPQLQNIVSTVNLGCPLDLKFIALQARNAEYNPKRFAAVIMRIR
EPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVASCDVC
FPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERAEIYDAF
ENIYPILRGFRKQ
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggttcttcactcatggacgagtctgcgttggagcgatactttgatgactccattgcaa
atgactccggcttcagtttgggggaggagttgggcctccagagccccgcccaccctgcac
ccagcggggagccgggggaggagcttgacctcagcttcctacctgatgacctcagcacgc
aggacgaggcggggcgtcacgatgacacagcagagagtcagactgcagctctggacgtgt
ctcaggacaggcgtctgtctggactacaactcccagggttcaacagcagctgacccccag
caggggtcgtccgtgtcggggctggggaccggagcctcccccttctgtgccatgacccct
atgacccccatgacccccatgacccccgtgaccgagaggtcaggaatcatcccacagtta
cagaacatcgtctccacggtgaaccttggctgtccgctggatctgaagtttattgccctc
caggcaagaaacgcagagtacaacccgaagcgttttgcggcggtcatcatgaggatccgc
gagccgagaaccaccgcgctgatcttcagctcggggaagatggtctgcacaggagccaag
agcgaggagcagtcgcgactggcggccaggaagtacgctcgggtggtgcagaaactgggt
ttccccgcccgcttcctggactttaagatccagaacatggtggccagctgcgacgtgtgc
ttccccatcagactggaaggtctggtcctgacacaccaacagttcagcagttatgagccg
gagctgtttcctggcctcatctaccgcatggtgaagcctcgcatcgtcctgctcatcttc
gtgtcggggaaagtggttctgaccggagctaaagaacgagctgagatctacgacgcgttt
gagaacatttatccgatcctgagaggcttcaggaaacagtga
DBGET
integrated database retrieval system
