Micropterus salmoides (largemouth bass): 119910301
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Entry
119910301 CDS
T07309
Name
(RefSeq) calpain-1 catalytic subunit-like
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04141
Protein processing in endoplasmic reticulum
msam04210
Apoptosis
msam04217
Necroptosis
msam04218
Cellular senescence
msam04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119910301
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
119910301
04217 Necroptosis
119910301
04218 Cellular senescence
119910301
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
119910301
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msam01002
]
119910301
Enzymes [BR:
msam01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
119910301
Peptidases and inhibitors [BR:
msam01002
]
Cysteine peptidases
Family C2: calpain family
119910301
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
CAPN13-like_C_EFh
Na_Ca_ex_C
Motif
Other DBs
NCBI-GeneID:
119910301
NCBI-ProteinID:
XP_038584750
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MPPTGVCTTIINARQKKDGYGPFTKPEKFLNQDFHQLKRYCVIQRVRYIDEMFPPDRKSI
GEGLLSPADLARVEWLRPSILVLNPSLVVDGVSRFDFGQGLVGNCWFLAAIGALTFQNDV
LEQVVPLEQRFDEDYCGLFHFRFWRFGRWVDVVIDDKLPTINGRLIFVHSKDPTEFWPAL
LEKAYAKVCGSYSDMNAGTPAEALVDFTGGVHIRLHLPDCLPDLWEIMCRAGQSKSLMGC
GTAQGETFADSVLPNGLVQSHSYAVTGVKQMMSREQLVHLVRLWNPWGKGEWNGDWSDQS
PLWQTVSPQNREMCLSVADDGEFWMTLEDFCKFYTDLDICCLCPDFLDGSSSSLWKTSFY
EGRWVAGTTAGGCINNLESFWTNPQYRVKVDKLLTECSTKEGEKNMLVSLMQKPDKRNRR
LVQNLHIGFSVFEVTKEYEAQRGKFPASFFSKNEPVAQTKTYMNAREVMAFIMLTPGEYL
IVPSTFKPNETASFILTILSKAETHVQENSGGLNHEQLEEEDACKSIPAENGVDDENKRN
LFQQFSDKYDEVDAEQLQRLLNDRILKGDLKSGGFSIDACRSMVALIDTSVTGKLNGEEF
VRLWRKVAKYKETFFHTDVSQTGTLSLKELRNAITVSGMRISDEMLNIIALRYGSSSGFI
TLENFISLILRIDCMNNIFGQLSDGLTVTLRESEWMYLSMYT
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgcctccaactggtgtgtgcactacaatcatcaatgcacgtcaaaagaaagatggttat
ggtcccttcaccaaacctgagaagttcctcaaccaagacttccatcagctgaaacgctac
tgtgtcatccaacgggtgaggtacatcgatgagatgttcccccctgacaggaagtccatc
ggcgaagggttgctgagccctgctgacctagctcgagtggagtggctgagaccatcgata
cttgttctcaacccatctcttgttgttgacggggtctccaggtttgactttggtcaaggt
ttggttggaaactgttggtttcttgcggctatcggggctctgacattccagaatgacgtc
cttgagcaagttgttcctctcgagcaaagatttgatgaggactactgtgggctgttccac
ttcaggttctggagatttggaaggtgggtggatgttgtcattgatgacaagctaccaaca
atcaatggcagactaatctttgttcactccaaagacccaactgagttctggcctgctttg
ctggagaaagcttatgcgaaagtgtgcggttcctactcagacatgaatgctggaactcct
gccgaggctttggtggacttcactggaggtgttcacatacgacttcatctgccagactgt
cttccagacctgtgggaaattatgtgcagagctggccaatccaagtcactgatgggttgt
ggtacagcacagggggagacatttgccgacagtgtattaccaaatggattggtccaaagc
cattcctacgctgtcacaggtgtgaaacagatgatgagcagagagcaactagtacacctg
gtccgtttgtggaacccctggggcaaaggagagtggaacggagactggagtgatcagtcg
cctttgtggcaaaccgtgagtcctcaaaatcgtgagatgtgcctttcagtggctgatgat
ggggagttttggatgaccctggaagacttctgtaagttctacacggatcttgacatctgc
tgcctgtgtcccgacttccttgatggaagttcttcatccctttggaagacctccttctac
gagggcagatgggtggcaggcaccacggctggaggatgcataaataaccttgagagcttc
tggactaatccacagtatcgggtcaaggttgacaaactactgactgaatgttctacaaaa
gagggtgaaaaaaacatgctggtgtctctcatgcaaaagcctgacaagaggaacaggcgt
cttgtccaaaatcttcacattggattctctgtatttgaggtgaccaaagaatacgaggca
cagaggggaaagttcccagcctctttcttcagcaaaaacgaacctgttgcccaaactaaa
acctacatgaatgcacgtgaggtgatggcgttcataatgctgacaccaggcgagtacctg
attgtgccgtccaccttcaaacccaacgagacagcctccttcatcctgaccattctctcc
aaggcagagacccatgtccaagagaattctggtggccttaaccatgaacagttagaggaa
gaagacgcgtgcaagtccataccagccgaaaatggagtggatgacgaaaacaagagaaac
ttgttccagcaattctctgacaagtatgatgaagtggatgctgagcagctccagagactt
ctaaatgacagaatcctgaaaggagacttgaaatctggaggcttcagcattgatgcctgt
cgcagcatggttgcactaatagatacatcagttactggcaaactaaatggtgaggaattt
gttcgtctgtggaggaaggttgccaaatacaaggaaactttcttccacactgatgtttca
cagacaggaacactgtcactgaaggagctcaggaatgcaatcacagtttcaggaatgagg
atcagcgatgaaatgctgaatataattgctctgcgctacggttcttcctctggattcata
acactggaaaacttcatcagtctaatccttcgcattgactgcatgaacaacatcttcggc
cagctgtctgatggattgactgtcactcttcgagaatcagagtggatgtacctttcgatg
tacacttaa
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