Micropterus salmoides (largemouth bass): 119910359
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Entry
119910359 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1B-like
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119910359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119910359
03021 Transcription machinery [BR:
msam03021
]
119910359
03036 Chromosome and associated proteins [BR:
msam03036
]
119910359
Transcription factors [BR:
msam03000
]
Eukaryotic type
Helix-turn-helix
ARID
119910359
Transcription machinery [BR:
msam03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119910359
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119910359
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
119910359
NCBI-ProteinID:
XP_038584862
LinkDB
All DBs
Position
Unknown
AA seq
2271 aa
AA seq
DB search
MAAQVASAPTRTNSKNKKLSSGLGPELISGKSGGGGGGGGTIQRTGPMLGAGDGTLNNVD
HHRRNELNMVHSTSTTHNAPDGPDKDGNNLTSAPASTNSTTSSMETGLIANHKLKCVGSG
DPPQPQPQQQQPPPQFGQFTPHQQRQIQSNNNGQGPRGDRGMDHQHHGGKENLLGGQGEP
QQQHMPGKGDGDLTCKPAERMMGTRYEHSNLGPTGNNSEFNNNYYTPRPCYEQHGGQQQQ
STGMGITHSSAHNSIENSHEAGYHNSQYNQYPAYRAGYSGGAYGMMGPSGCRQSGNMMMG
SNSSASHSKSPLGAASGGFQRFPGQTQQQHPSGATPTLNQLLTSPSPMMRGYGGAYQDYS
GPTAQQQAGMGLGKDVGPQYGATSAHGWGGQQRNHPHSLSPGNGGQGLGRTQVSSMDFMA
MKRSQLYGMANNPYSSPQQPGPYPPSQTYTSPPPHRYPMSMQGRGQMGMGGMQYPQQQQV
APYGQQGMGGYSQQQQQQQQQQAGQQGTSPYFSPPQQTPPGPTQSPYLQPRPPPQQAQQE
AYSTRGPAPGNSGKANNEDGVPQDRPSSLPDLSGSIDDLPTGTEAGLGSAVSAGGSSSSN
SSSQGEQGGASNQGQSPFSPHASPHLPSHRSGPSPSPVGSPAGSTQSQQSRSGSGPISPA
SGPSANTNAPGSTMATQNSGNGPDGAHPPITCSPMAQERGFMSNMQRNQASSQFASPQSG
PPMSPHPSPGGPLYPGMGPYSQSGPTGPYGPQGSQYGHQGNYPRSSNYSGTASTSYSXPG
PGMTNSLGMNSSSPMHGQGPGQPIPVGRSHGPGSQNRVYPPMAPSSPSMPQPAGPGMGPP
SLGSSNRKAQETAATAMSGSANSTHNRQGSYQGPGISQASTMATTVPYSQPTGNNSSAMG
NTQGPAYSMPPSGVMGMSGDGMMSPDGKPKTDVKDDSGPASEHHKPKLQDGYSNNNSSSI
GSQQCVSQPATPGGALPVPSPLSPSPASLSSYHGDDSDSISSPPWPLKTPSSPKANPNSS
SLSGERITRLFELGVEPERRGWVERYLTFMEERGTPVAQLPTVGKKPLDLWKLYIAVREI
GGLAMVNKNKKWRELSTNLNVGTSSSSASSLKKQYIQYLFAYECKMERGEEPPADSSSSG
SSMAGGDSRKQVKIQPPSPANSGGSLQGPQTPQSSGSSSTAEAAGDLKPPTPATTPLGQV
TPLPPNRSSVSVQDPFSEVSDPAFQKRATSLPPSGPYQQGLSMPDMMMRMQYDTKDPFAG
MRKMAGADPYIPAQMPGGGMQDMYGRPPSALSMSQRSQYPYGPGYDRRPDHVMGMEGSMG
PPGSQNNMGPSNSEGSMYSPSRYPSQQRHDGYGQQYPGMPYGMHPSGMYPQQQGYKRPMD
GMYGPPPKRHESDMYAMQYANQQPDMYNHYGGGYSGPEHRPIQGQFPFPYPRDRMAPSGQ
SQHSMMAGGPTTNHANDGPNMWPSRTDLGYPYPNRQGPPSQMPPYGSIGRDDMDGRPGQE
QWHRQSPYMSSSGGMPPLSSRQPSSFSNSPSMANHLPRAPSPGAFQRSMDSRMSPSKAPF
MSPMKMPKPGMTMMGPQGSGPLGQFPPNLRRDLNYPPGSVEATMPILKPRRKLTSKDTGT
PEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVASFNLSQLPGFLELIVEYFRRCLIE
IFGILEEFEVGTVAQKSLLDPAANQKQEAIPDQETDSAVQPEAEPGPAAETRVEQAGSAM
EEALPVTAEPASVEVNGETEESEVSVKKEDKSEEDREKEGKDEEESEKGAESKNECVSQP
AAELEPKAKQASKYDKLPIKIVHKENLIEDMTEHFGYVTEFTSGLLHWQAGGGDSTAHIQ
TQFEPRSDPPARADGKTRKENKEENKVDDGKKQPLKHITATIDDVLCARVDALSYAHPAR
SLPSYPFRVHLDGEQDHITLLEDEPRCLDEAPLSTASAWQDSLAKXCLCVSNIIRSLSFI
PGNDLDMSRHPALVLLLGRLLLLHHQHPERNRSPPSYQRDEQQEKGLTSSKEEWWWECLS
LLRENAMVTLANISGQLDLSTYPDTICLPILDGLLHWMVCPSAEAQDPFPSAAPHSQLTP
QRLVLECLCKLSILGDNVDLLLATPPFSRQEKLFTVLVRYVGQRKAQVYREMAVAVLSHL
AQGDTTAARAIAMQKGSVGNLVGFLEDGVSMAQYQQNPHSLLHMGHPPMDPPSINMMCRA
AKGLLAMAKVEENKTEFVLYESRLLDISISSVLNAGVVGVICQVLFHLGKS
NT seq
6816 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcaagttgcatcggctccgaccagaactaatagcaaaaataagaaattatcc
agtggtctgggtccggagctcatttcggggaaatccggaggaggaggaggaggaggaggg
accatacagcggactggaccgatgctgggtgccggagatgggactctgaataatgtagac
catcaccgccgaaacgagctcaacatggttcattcaacttccacgactcacaacgctccg
gacggccccgacaaggatgggaataacctcacgtccgccccggcctcgactaattcaacc
acttcctcgatggaaacgggtttgatcgcgaaccacaagctgaaatgtgtggggagcgga
gatccccctcagcctcagccgcagcagcagcagccgccgccgcaattcggccaatttacg
ccacatcagcagcgacagatccaaagtaacaacaacggccagggaccccgtggggacaga
ggtatggatcaccaacaccacgggggcaaagagaacctgttggggggccagggggagcca
cagcagcagcacatgccaggaaaaggtgatggggacctcacctgtaaacccgcggagagg
atgatgggtaccaggtatgaacactctaacttggggccaactggtaacaactctgagttt
aataacaactattacactccaaggccctgttatgagcaacatggcggacagcagcaacaa
agcaccgggatggggataacgcattcctcggcacataacagcattgagaactcccacgaa
gcagggtaccacaacagccagtacaatcagtacccggcgtaccgggcgggatacagcggc
ggggcctacggaatgatggggccctctggttgccggcaatctgggaacatgatgatgggc
agcaactcctcagcaagccacagcaagtctcccctgggagctgcttcaggtggctttcag
aggttcccaggacaaactcaacagcagcatccctcaggagccaccccgaccctcaaccaa
ctgctgacatcccccagccccatgatgcggggttatggcggtgcatatcaagactacagc
ggccccacagcgcagcagcaagccggcatgggcctagggaaggacgtggggccccagtat
ggagccacctctgcccacggctggggagggcagcagagaaaccaccctcattcactgagt
ccaggcaacggagggcaaggcctcggcaggacgcaggtgtcctccatggacttcatggcg
atgaagcgttcgcagctgtacggcatggccaacaatccctactccagcccacaacagccg
gggccttatcctcctagccagacatacacgtcacctcctccacacagatatccaatgagc
atgcagggaaggggtcaaatgggcatgggcgggatgcagtatcctcaacagcagcaggtg
gcaccatatggccagcaggggatgggcggttacagccagcagcagcagcagcagcagcag
cagcaggcggggcagcaggggacctctccatactttagcccccctcagcagacgcctcca
ggcccgacccagagcccctacctgcagcctcgaccaccaccacaacaggcccagcaggag
gcctacagcaccaggggtcctgcaccaggaaactctggtaaggccaacaatgaggatggc
gtcccccaggaccgcccgtccagtctgccggatctgtccggctcgattgatgacctcccc
actgggacggaggctggtctgggctcagccgtcagcgccggcggctcctccagcagcaac
agcagtagccaaggggagcagggaggggccagcaaccagggacagtcccccttctctcct
cacgcatccccccacctccccagccacaggagcgggccctctccctcccctgtgggctcg
cctgcaggctccactcagtcccagcagtcgcgatcaggctctggacccatctctcctgcc
agcggaccctctgccaacaccaacgcaccaggttccactatggccacgcagaactctgga
aatggaccagatggagcccacccgccaatcacctgctcacctatggctcaggagagaggg
ttcatgtccaacatgcagaggaaccaggctagctcccagtttgcttctcctcagtccgga
cctcctatgtccccccacccttcccctgggggtccattgtatcctgggatgggtccatac
tcccagagcggccccacaggcccttatggacctcaaggatcacagtatggacaccaaggt
aattaccctcgctcctccaactacagtgggactgccagtaccagctatagcnggcccggg
cctggcatgaccaacagtctgggaatgaactctagcagccccatgcatgggcaggggcct
ggccagcccatacctgtaggacgcagccacggcccaggcagccagaacagagtgtacccg
cccatggctcccagctcccccagcatgccacagccagctgggcccgggatgggccctcct
tctctgggtagctctaaccgcaaggcccaggagacagcagcaactgccatgtcgggatct
gctaactcaacacacaacaggcaaggcagctatcaaggccccggcatcagccaggcgagc
accatggctactactgtcccctacagccagccaacgggaaacaacagttcagccatgggc
aacacacagggtccagcctacagtatgccgccttcaggagtcatgggaatgtcaggagac
gggatgatgagcccagatgggaaaccgaaaacggacgtaaaagacgacagcggccccgcc
agcgagcatcacaaaccaaagctacaggatggctacagcaacaacaacagcagcagcatc
ggctcccagcagtgtgtgtcccagccagctacgccgggaggtgccctgcccgtgccctcc
ccgctctcacccagcccagccagcctgtcctcctaccacggagatgacagcgacagcatc
agcagtcctccctggcccctcaagaccccctccagtcctaaagccaacccaaactcctcc
tccctcagtggggagagaatcacgcggctgtttgagctgggcgtggagccggagaggcgg
ggctgggtggagcgatacctgaccttcatggaggagaggggtacgcctgttgcccagctt
cccactgtgggcaagaagccgctggacctctggaagctctacatagctgtgcgggagata
ggaggcctcgccatggtaaacaagaacaagaaatggcgcgagctgtccaccaacctgaac
gtgggtacatccagcagctccgccagctcgctcaagaagcagtacatccagtatctgttt
gcctatgagtgtaagatggagaggggagaagagccgccggcagacagcagcagcagcggt
agcagcatggctggaggggacagcaggaagcaggttaagatccagccaccctcacctgct
aattctggtggctccctccaaggcccacagacgccccagtcctctggcagcagctctaca
gcggaggcagcaggggatctgaaaccccccacacctgctaccaccccactgggacaggtc
acaccattgccccccaacaggagcagtgtgagcgtacaggaccccttctcagaggtgagc
gacccggccttccagaagcgtgctacctccctgcccccctcaggtccttaccagcaaggc
ctcagcatgcctgacatgatgatgaggatgcagtatgacaccaaggaccccttcgccggg
atgagaaagatggcaggagctgatccctacatacctgcccagatgcctggcggcggtatg
caggacatgtatggtcgacccccgtcagccttgagcatgagccaacggtcacagtatcca
tacggcccaggctatgacaggagaccggaccatgtcatggggatggaagggagcatgggt
ccccctgggagtcagaacaacatgggaccttctaacagtgagggcagcatgtactctccc
agtagatacccttcacagcagagacatgatggctacggtcagcagtatcctggcatgccg
tatgggatgcatccatctgggatgtacccacagcaacagggctacaaacggccaatggat
ggcatgtatggccccccacccaagagacacgagagcgacatgtatgccatgcagtacgcc
aaccagcagccggacatgtacaaccactacgggggtgggtactcaggccctgaacacaga
cccatccagggacagtttcccttcccctacccccgtgaccgcatggccccctcaggtcag
agccagcacagtatgatggctggtgggcccactactaaccatgctaacgatggccccaac
atgtggccgtccaggacagacctcggctatccctaccccaacagacaggggccgccatca
cagatgccaccttatggctcgattggtagagatgacatggacgggcggcccgggcaggag
cagtggcaccgtcagtctccctacatgtcatcatcaggtggcatgcctcccctgtcttca
cgccagccatcttctttttccaactctccatccatggccaaccacctgcccagagcaccc
agcccaggggccttccaacgctccatggactctaggatgtcacccagcaaagcaccgttc
atgtcacccatgaagatgcctaagcctgggatgaccatgatgggcccacagggcagtgga
ccccttggtcagtttcctcccaacctgaggcgggacctcaactacccgccaggatcagtt
gaggccaccatgcctattcttaagccccgacgcaagctcacctccaaggacactggaacg
cctgaggcctggcgtgtgatgatgtctctgaagtctggcctgctggcagagagcacatgg
gctctagacaccatcaacatcctgctgtacgatgacagcactgtggcctcctttaacctc
tcccagttgcctggattcctcgagctgattgtggagtacttccgccgttgtctgatcgag
atctttgggatcctggaagagtttgaggtggggaccgtggctcagaaaagccttttggac
cctgctgctaaccagaaacaagaagccatccctgaccaggaaacagactctgctgttcaa
cctgaagctgagccaggtccggcagcagagacgcgggtggagcaagcaggaagcgccatg
gaggaagctctacctgtcactgcagagccagcgtcggtggaggtgaacggtgagacggag
gagtctgaggtgagcgtaaagaaggaggacaagagtgaagaggacagagagaaagagggg
aaagacgaggaagagagtgaaaaaggagcagagagtaaaaatgagtgtgtttcccagcct
gcagcagagctagaacctaaagctaaacaagccagtaaatatgataagctccccatcaag
attgtccacaaagagaacctgattgaagacatgactgagcactttggttacgtcactgag
ttcaccagcgggttgcttcactggcaggcgggtggaggtgattccaccgcacacattcaa
acacaatttgaacctcggagtgacccacctgccagggcggatggaaagacaagaaaagaa
aacaaagaggaaaacaaggtggacgatggaaagaagcagccactgaaacatatcactgct
actattgatgatgttctgtgcgcacgggtcgacgccctttcgtatgctcaccccgcacgc
tccttgccatcctaccccttcagggtgcatctggatggggagcaggaccacatcaccttg
ctggaggatgagcctcgctgcctggacgaggccccgctctccacagcttccgcctggcag
gactcgctggccaagncgtgcctctgcgtctccaacatcatccggagcctatcctttatc
ccgggaaatgacttggatatgtcacgccaccctgctctggttctacttctgggcaggctg
ctcctgctgcaccaccagcacccggagaggaataggtcgccccctagctaccagagagat
gagcagcaggagaaggggctgacgagtagcaaagaggagtggtggtgggagtgcctgagt
ctgctcagggagaacgccatggtcactctggccaacatctcgggtcagctggatctctcc
acctatccagacactatctgcctccccatcttggatggccttcttcactggatggtgtgc
ccttctgctgaagcccaggacccgttcccatcagcagcaccccactcccagctcactccc
cagaggctggtgctggagtgcctctgcaagttgagcatcctgggcgacaatgttgacctc
ctgctagctacgccgcctttcagccgacaggagaaactcttcactgtcttggtccggtac
gtgggtcagaggaaggcccaggtgtacagggagatggctgtggctgttctctcccacctg
gcacaaggagacaccacagccgcacgtgccatagccatgcagaagggcagcgtgggtaac
ttggtaggcttcttggaggatggtgttagcatggcgcagtaccaacagaaccctcacagc
ttgctgcacatggggcacccccctatggacccacctagcataaacatgatgtgcagagca
gctaaaggcctgttagctatggctaaagtggaggagaacaagacagagtttgtgctgtat
gaaagcagattattagacatctccatttcctcggtgctcaacgcaggagtggtgggtgtt
atttgccaagttctttttcacttagggaaatcatga
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integrated database retrieval system
