KEGG   Micropterus salmoides (largemouth bass): 119910544
Entry
119910544         CDS       T07309                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
  KO
K12842  U2-associated protein SR140
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119910544
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:msam03041]
    119910544
Spliceosome [BR:msam03041]
 Complex A
  U2 snRNP components
   U2 related factors
    119910544
 Complex B
    119910544
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 SET_assoc RRM_7
Other DBs
NCBI-GeneID: 119910544
NCBI-ProteinID: XP_038585134
LinkDB
Position
Unknown
AA seq 991 aa
MIDFILVPQKMADRTPGGSQKASAKALLESKLKSFSIGKMAVAKRTLSKKEQDEIKKKED
ERAAAEIYEEFLAAFEGGGEGKVKAFVRGGIANATKEEAASDEKKGKLYKPKSRFETQPK
SILPLETPSQFLPLDKRHSLKKSTEKEKKKSNLELFKEELKQIQEERDERHKMKGRVSRF
EPLSGTDGRRSSDGSSRRNRPSSVLDDCAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQE
FGRYGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMNFEMKLGWG
KGVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPLLPPPKNKEEFEKTLS
QAIVKVVIPTERNLLSLIHRMIEFVVREGPMFEAMIMNREINNPMYRFLFENQSPAHVYY
RWKLYTILQGEAPVKWKTEDFRMFKNGSLWRPPPLNPYLHGPYDDGEEEEEEEDAGKKGC
LKEEERDKLEEMLRGLTPRRGDIAEAMLFCLSHAEAAEEIVECVTESLSILKTPLPKKIA
RLYLVSDVLYNSSAKVTNASYYRKYFEAKLCQIFSDLNATYKAIQGHLQSENFKQRVMSC
FRAWEDWAVYPDPFLIKLQNIFLGLVNLSAEKEPPAIIVEAEPAEDIDGAPIGEYVDGSL
LEDVDGVPIDAGPIDGAPIDGAPLDDLDGVPIKTMEEDIDGIPLDPSKEATFKVAPSKWE
AVDESELQAQAVTTSKWEIFEQPEETKKDEGDSDDDDRSPRSEDNQSFSNPIRDDLDIKA
KMSEMNEEKRTKLREIEVKVMKFQDELESGKRPKKPGQSIQEQVEHYRDKLLQKEKEKEK
LEREKEREKKEKEKAETRLKDLKKEKEKEDTPTRKDRHLSPWADRKRRHSGSPSPTRSSS
RRGRSSSPRSERSERSERSDRSYSKDTSSRTSHKDSPRSSNKKSSKRSPSPRTPKRSRRS
RSRTPKKSAKKSRSKSRSPHRSHKKSKKSKH
NT seq 2976 nt   +upstreamnt  +downstreamnt
atgatcgattttattttagttccacaaaagatggcggaccgaacgcctggtggctctcaa
aaagctagtgctaaggcgctgcttgaaagcaaactgaagtctttcagcattggcaaaatg
gcagtggccaagaggaccctaagcaaaaaagaacaagatgaaataaagaaaaaagaggat
gaacgggcagcagcagagatttatgaggagtttcttgctgcctttgaaggaggaggggaa
ggcaaagtcaaggcctttgtccgtggtggtattgcaaatgcaacaaaagaggaggcagct
tctgatgagaagaaaggaaagttgtacaagcccaagtcacgttttgagacacaaccgaaa
agcatcttgcctttggaaaccccatctcagtttttaccgttagacaaaagacattctttg
aagaaaagtactgaaaaggaaaagaagaagagcaacttggagcttttcaaagaagaactt
aaacaaatacaggaggaaagggatgaaagacacaagatgaaaggacgtgttagtcgattc
gaacctctctcgggcacggatggaagacgttcatcggatggttcttcaagaagaaaccgt
ccgtccagtgttttggatgattgtgcgccaggttcccatgacgttggagacccatccact
actaacttgtatctcggaaacatcaatccacagatgaatgaggaaatgctgtgtcaagag
tttggccgctatggcccgctggccagtgtgaagatcatgtggccgaggacagacgaggag
agagctcgagagaggaactgtggctttgtggctttcatgaacaggagggatgctgagcga
gcgctcaagaacctaaatggaaagatgattatgaactttgagatgaaattaggatgggga
aaaggtgtgcccattccaccccaccccatctacatccctccttccatgatggagcacaca
ctcccaccacctccctctggcctacccttcaacgcacagccccgggagaggctaaagaac
cccaatgctcccctgcttcctccacctaaaaacaaggaggagtttgagaagactctgtcg
caagccatagtcaaagtggttatcccaacagaaaggaatttgctctctctcatccaccga
atgatcgagtttgtggtgcgtgaaggcccaatgtttgaagccatgatcatgaacagagaa
atcaacaatcctatgtacaggtttctatttgagaaccagagtccggcacatgtatactac
cggtggaagctctacaccatactacagggtgaagcaccagtcaaatggaaaacagaggac
tttaggatgtttaagaatggctctttgtggcgtccgcctcctcttaatccatacctccat
ggtccttatgatgatggggaggaagaggaggaagaggaggatgcgggcaagaaaggctgc
ttgaaggaagaagaacgggacaaactagaggagatgctgcgtggtttgactcccaggagg
ggcgacatagcagaagccatgttgttttgtctcagccacgccgaagcagctgaagagatt
gtggagtgcgtcacagagtctctctccatcctcaagacccctcttcccaagaagattgca
cggttatatctagtttctgatgtcctgtacaactcttctgccaaagtaaccaatgcgtct
tactacagaaaatattttgaggcaaagctctgccaaattttctcagatctcaacgcaact
tacaaagcgatacagggccaccttcagagtgagaactttaagcaaagagtaatgtcatgt
ttccgggcatgggaggactgggctgtgtacccggaccccttccttatcaagctgcagaac
atcttcctgggtctagttaatctgtctgcagagaaggaaccccctgccattattgtggag
gctgagccggcagaggacattgatggggctccaataggggagtatgtagatggcagtctg
ctggaggatgtggatggggtgccgattgacgcagggcccattgatggggctcctattgat
ggagcccccctggatgacctcgatggtgtccctatcaagaccatggaagaagacatagat
ggaatacctttggatccgtccaaggaggcaacctttaaggtagcaccctcgaaatgggaa
gcagtggacgagtctgagttacaagctcaagctgtgacaacttcaaagtgggagatattt
gagcagccagaagaaacaaaaaaggatgagggcgacagtgacgatgatgacaggagccct
cgctcagaagataatcaaagcttctccaaccccatcagagatgacttggatattaaggcc
aagatgtctgaaatgaatgaggagaaacgcaccaagctcagagagatagaggttaaggtc
atgaagttccaggatgagctggagtctgggaaaaggcccaaaaagcctgggcagagtatt
caggagcaggtggagcactacagggacaaattactacaaaaggaaaaagaaaaggagaaa
cttgaacgggagaaagagagggagaagaaagagaaggagaaagctgagaccaggttgaaa
gacttgaagaaggaaaaagagaaggaagacacgccaacccgaaaagacagacatttgtcc
ccttgggctgataggaagcggcgtcacagtgggtcacccagcccaacgcggagtagcagc
agacgaggccggtcatcctcaccgcgttcagagcggtccgaaagatcagaacgctccgac
cgctcatactctaaagacacatcttcccgcacttcccataaagactccccgcgatccagc
aacaaaaagtcctccaagaggtctccctcacctcgcacacccaaacgatccaggaggtcg
cgctccaggacacccaagaaatccgctaagaagtcccgctctaaatcaaggtcacctcac
cggtctcacaaaaaatcaaagaagagcaaacactga

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