Micropterus salmoides (largemouth bass): 119910711
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Entry
119910711 CDS
T07309
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119910711
Transcription factors [BR:
msam03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
119910711
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
119910711
NCBI-ProteinID:
XP_038585427
LinkDB
All DBs
Position
Unknown
AA seq
1084 aa
AA seq
DB search
MIRIFPDFSVQVTASAGGGPGAGGGGGGGGGGGMMTGPPVGRVPVPGTTNGTPQSVQGIT
AYQQSGIVEDRRYFWAEDDSVLPVSDPYWERPANAGSCSAARPKTLHLAGQQHTSSPWLQ
ALRKEKSRDAARSRRGKENFEFYELAKMLPLPGAITSQLDKASIIRLTISYLKMRDFANQ
GDPPWNLRMEGPPPNTSVKAIGAQRRRSPSVVASEIFEPHLGSHILQSLDGFVFALNKEG
RFLYISETVSIYLGLSQVELTGSSAFDYIHPGDHVEMAEQLGMKLPPGRGMSLSQGAVNE
DGASSASSSSHSETPEPVESSSPSLLAPDNSLERSFFIRMKSTLTKRGVHIKSSGYKVIH
VTGRLRIRMALTHSRSAPNQIMGMVVVAHALPPPTINEVRIDCQMFVTRVNMDLKIIYCE
NRINDYMDLTPVDIVGKRCYQFIHAEDVEGIRQCHLDLMNKGQCVTKYYRWIQKNGGYIW
IQSSATIAINAKNANEKNVIWVNYVLSNPEYKDTPMDIAQLPNLPEKTSESSETSDSESE
SKENSDNENAKSEGKSGHQSERSEDPETDSKRQQQPGQPHCSSEQEMKRQEEGDSSSNPE
SQDSDDSLEPSDGEGEEQEEATGGGGGGGGGGGRLGRLAGLGGLGGLGAIGGLGSLGGLH
IKVEHYGEGDEVQLQNSQTSSSEEEEEEEDDDDDEEEDGGVQDCDSANAGSKLQKRRKRR
KVQKWDGSRSRRLRLSSNTPSPVSMGDTTQLIDPSQATGSSHLLASTDSPNSSGATSSVL
KIKTEMAEPINFDNDSSIWNFPPNREISRNESPYSMTSKPSAPGSHETFPSPQGGSLQVA
IPESVLTPPGTEGGAGGVRKPPYNGSSAPSSASSAASLVPPSSASSADPLSPPLSASPRD
KQQGTPTTSSSSSSSSSSSTSSSSLLYSGDLEALQRLQAGNVVLPLVHRVTGTLASTNTT
APRVYTTGTIRYAPADVTLAMAQGNLLPNAAMNFVDSSGFGLDPKTPMEMLYHHVHRLNM
SAAAAAGPFVGSPAATAGNGALGGQMPTAANVFTTAEGLFSTLPFPVYSNGIHTTQTTLE
RKED
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatcttcccggatttcagcgtccaggtgactgcttcggcaggcggtggaccc
ggggctgggggcggaggaggaggcggcgggggcggtgggatgatgaccggacccccggtg
ggtcgggtgccggtccccggaacaacgaacggcaccccgcagagtgtccagggaatcacc
gcctaccagcaaagtgggattgtagaggacaggaggtatttttgggctgaggatgacagt
gttttaccagtcagtgacccctactgggagcggccggctaatgcgggcagctgctccgcc
gcccggcccaagacccttcacctggccggccagcagcatacctcctcaccatggctgcag
gctctgaggaaggagaagtcacgggacgcagcgcgatcgcggcggggaaaggagaacttt
gagttttatgaactggccaagatgctcccgctgccgggcgccatcaccagccagctggac
aaggcctccatcatccgactcaccatcagctacctgaagatgagggacttcgccaaccag
ggagacccgccgtggaacctgcgcatggagggcccaccgcccaacacctccgtcaaagct
atcggtgcgcagcgaaggaggagtcccagcgtcgtcgcgtcggagatcttcgaacctcac
ctgggcagccacattttacagtctctggacgggtttgtatttgcactaaacaaggaggga
cgcttcctctacatctccgagacggtctccatctacctgggactgtcacaggtggagctg
actggcagcagtgcgtttgactacatccaccctggtgatcacgtggagatggcagagcag
ctcggcatgaagcttcctcccggcagaggcatgtctctgtcccagggagccgtcaacgaa
gacggggcgtcctcggcttcgtcgtcgtctcactctgagacgcccgaaccagtggagtcc
agcagtcccagtcttctggctcctgataacagtctggaacgatccttcttcatccggatg
aagtccacgctcacaaagagaggagtgcacatcaagtcctcaggatataaagtgatccac
gtcacggggcgtctgcgcatcaggatggctttgacacacagtcgctcggcacccaatcag
atcatggggatggtggtggtggctcacgcactcccgccgcccacaatcaacgaggtgcgc
atcgactgtcaaatgttcgtcacgcgagtcaacatggacctcaagatcatctactgcgag
aacaggatcaatgactacatggacctgactccggtggacattgtcgggaagaggtgctac
cagttcattcatgctgaagacgtggagggaatcagacagtgtcacctggacttgatgaat
aagggtcagtgtgtgacaaagtactaccggtggatccagaagaacgggggttacatctgg
atccagtccagcgccaccatcgccatcaacgccaagaacgccaatgagaagaacgtcatc
tgggtcaactacgtcctcagtaatccagagtataaagacacgcccatggacatcgcccag
ctgcccaacctgcccgagaaaacatctgagtcctccgagacctccgactctgagtcagag
tccaaagaaaactctgacaatgagaacgccaagtccgagggaaagtcgggccaccaatca
gaacgcagcgaggatccagagacagacagcaagcgtcagcagcaaccgggccaaccacat
tgctcctccgaacaggaaatgaagcgccaggaagaaggagacagttcgagtaaccccgag
agccaggacagtgacgacagtctggaaccttcagatggagagggagaagaacaggaggag
gcaacggggggaggaggaggaggaggaggaggaggaggaaggcttggcaggttagcagga
ttgggtgggttagggggactgggcgccatcggaggactgggcagtctgggagggttacat
ataaaagtagagcactacggagaaggggacgaagtacagcttcagaactcgcaaacttct
tcatcagaggaagaggaagaagaggaggacgacgatgacgatgaggaagaggacgggggg
gtgcaagattgcgacagtgccaatgccgggagcaagctccaaaagaggcggaagaggagg
aaagtacagaaatgggacggatcccggagtaggaggctccgtctctcctcaaacacacct
agccccgtttccatgggcgataccacacagctgattgacccctcacaggccacaggctcc
tcccaccttctcgcctccactgactcgccaaacagttcaggtgcaacgtcgtctgtcctg
aaaatcaagacggagatggcagaaccgattaactttgacaacgacagcagcatctggaac
ttcccacccaacagagagatttccagaaacgagtccccgtacagcatgacctccaagccg
tccgctccggggagccacgagaccttcccctcaccccagggaggctctctccaggtagcc
atccccgagtccgtcctcacccctcctggaaccgagggaggagcaggaggagtgaggaag
cctccttacaatggaagctctgccccatcctctgcttccagcgctgcgagtttagttcct
ccgtccagcgcctcctctgccgaccccctgtcccctccactctccgcctccccgcgggac
aagcaacaaggcactcccaccacctcttcttcatcctcctcctcctcctcctcgtcaacc
tcttcctcctcactgctgtactctggcgacctcgaggcgctacagcgtctgcaggccggt
aatgttgtgctcccgttggtgcacagggtcacggggactctggcctccaccaacacgaca
gctccccgggtctacaccaccgggaccatcaggtacgcaccggcggacgtcaccctggct
atggcgcaaggcaacctcctcccaaatgctgccatgaactttgtcgacagctcggggttc
ggcctggaccctaagacgcccatggagatgctctaccaccacgtccacaggctcaacatg
tcggcggcggcagccgccggcccttttgtcggatctccggctgccaccgccgggaacggc
gccctgggaggccagatgccgaccgcggccaatgtcttcaccacagctgagggacttttc
tcgacgctaccgttcccggtgtacagcaacgggatccacaccacgcagacaactctggag
aggaaggaggattaa
DBGET
integrated database retrieval system
