Micropterus salmoides (largemouth bass): 119910761
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Entry
119910761 CDS
T07309
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04137
Mitophagy - animal
msam04140
Autophagy - animal
msam04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119910761 (hif1aa)
04137 Mitophagy - animal
119910761 (hif1aa)
04148 Efferocytosis
119910761 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119910761 (hif1aa)
Transcription factors [BR:
msam03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
119910761 (hif1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
ATP-synt_VA_C
Motif
Other DBs
NCBI-GeneID:
119910761
NCBI-ProteinID:
XP_038585500
LinkDB
All DBs
Position
Unknown
AA seq
756 aa
AA seq
DB search
MDTGIVPEKKRVSSERRKEKSRDAARCRRGKESEVFYELAQELPLPHSVSSSLDKASIMR
LTISYLRMRKLLGTDKPMAEEETELDVLLNSSYLKALEGFLMVLSEDGDMIYLSENVNKC
LGLAQFDLTGHSVFDYIHPCDQEELREMLVHKTGSKKTKEPNTERSFFLRMKCTLTSRGR
TVNVKSATWKVLHCSGHVRVYYSHTEQTPNGQKEPPIPYLVLICDPIQHPSNIEVPLDTK
TFLSRHTMDMKFTYCDERITELMGYNPEDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQV
STGQYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQEEKLILSLEQTEDV
KPVKEEEEQEEEKDVVESSPSEMSPILLKEEEKGPKVNVFKLLTDMVKTQPLASLYDQLK
EVPEALTLLAPAAGDTIISLDFSCPDSEIQLLKDVPLYNDVMLPSTSDKLALPLSPLPPS
EPLHVTTTTTTTSEDTKDGDYAPAPSTTPTSSAEAESPLEFCFPMDSEMSSDFKLDLVEK
LFAIDTEPKTPFTTQAMDDLDLEMLAPYIPMDDDFQLRCLTPEEPLSCGPVKSLQSSPIH
ITQDIHSYPSSPFISPGSRTASPAPPEPVNALHLATIFAKSTPDNTVSLRTQAAQSTQRK
RKLGDIKEMIGQETLPQEQLKQGKKLKASESGTTRTILLLPSDMVSRLLGTTSESTGTLF
TLPQLTRDDCEVNAPLQGRQYLLQGEELMRALDHIN
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggacacaggaattgtaccagaaaagaaaagggtgagctcggagcgtaggaaggagaag
tccagggatgcagcgcgatgccggcgtgggaaggagtcggaggtgttctacgagctggcc
caggagctgcctctgccccacagcgtcagctccagtctggacaaggcgtcaataatgagg
ctcaccatcagctacctgcgcatgagaaaactgctcggcactgataagccaatggcagag
gaagaaacagagctggatgtcctactcaacagctcctacctaaaggccctggaaggcttc
cttatggtgctgtctgaagatggagatatgatctatctctccgagaatgtcaacaagtgc
ctcgggctggcacagtttgacctgactggacacagcgtgtttgactacatacatccctgt
gaccaggaggagctgagggagatgctggtccacaaaactggctccaaaaagaccaaggaa
ccaaacacagagcgcagcttcttcctccgaatgaaatgcactctcacaagcaggggccgc
accgtcaatgtcaaatcagctacatggaaggtgctccactgctcaggtcatgttcgtgta
tattacagccacactgagcagactcccaacgggcaaaaggagccacctattccatacctg
gttttgatctgtgaccccatccaacacccctccaacattgaggtccctctggacaccaaa
accttcctcagccgccatacaatggacatgaagttcacatattgtgacgagaggatcact
gagctcatgggttataatccagaggacctgttgaatcgttctgtgtatgagtactatcat
gctctggactcggaccatcttaccaagactcatcacaacttgtttgcaaagggccaggtc
agcacaggccagtaccggatgttggccaagagaggaggctttgtgtgggtggaaacccaa
gccactgtcatctacaataacaagaactcccagccacagtgcgttgtctgtgtcaacttt
gtgctcagtggcatccaggaggaaaaactgatcttgtctttggagcagactgaggacgta
aagccagtgaaggaggaggaggagcaggaggaagaaaaggatgtagtcgagagcagcccg
tccgaaatgtctccaatcctgctgaaggaggaggagaagggcccaaaggtgaatgtgttc
aaactgttgactgatatggtaaagacccagccgctggctagcctctatgaccagctgaag
gaagtgcctgaggctctcaccctgctggccccagctgctggagacacaatcatctccctg
gacttcagctgccctgattcagagatccagctgctgaaggatgtccctctctacaacgat
gtaatgcttccctccacgagtgacaagctggctctgcctctttcccctctgccgcccagc
gagcctctccatgtcaccaccaccaccaccacaacctctgaggatacaaaagacggggac
tatgctccagccccatccactacaccaaccagttccgcagaggctgagagtccgctggag
ttttgtttccccatggactccgaaatgagctcagatttcaaactggacttggtggagaag
ctgtttgccattgatacagagcccaagacccccttcaccacacaggcgatggacgacttg
gacctggagatgttggctccctacatccccatggacgacgacttccagctgcgctgtctg
accccagaggagcctctgtcttgtggaccagtcaaatcccttcagagttctccaatccac
atcacacaggacatccacagctatcccagctccccattcatctcaccaggcagtcgcaca
gcttccccagcaccgcctgagccagtaaacgcccttcatcttgccaccatctttgctaag
agcaccccggacaacacagtgtcgctcaggacccaggcagctcagagcacacagcgcaaa
agaaaactgggtgacataaaagagatgattggacaggaaactctgcctcaggaacaactg
aagcagggcaaaaagctgaaggcctccgagtcgggaacaaccaggaccatacttctgttg
ccttcagatatggtgagtcgtctgctgggcaccacgtcggagagcaccggcaccctcttc
acgctgccgcagctcacccgcgacgactgcgaggtcaacgcccccttacagggtcgtcag
tatctgctgcagggggaggagctgatgcgtgctctggaccacatcaactga
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