Micropterus salmoides (largemouth bass): 119910799
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Entry
119910799 CDS
T07309
Name
(RefSeq) afadin-like
KO
K05702
afadin
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04517
IgSF CAM signaling
msam04520
Adherens junction
msam04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119910799
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
119910799
04530 Tight junction
119910799
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DIL
PDZ
RA
PDZ_6
RA_2
PDZ_2
RA_3
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
119910799
NCBI-ProteinID:
XP_038585533
LinkDB
All DBs
Position
Unknown
AA seq
1222 aa
AA seq
DB search
MPEEEEREKLAEVIRQWNNNRLDLFEISQPDENLEFHGVMRFYFEDHVGGNVATKCLHVC
SNSSTQEVIETLSEKFRPDMKMLTTSYSLYEIHGNKERKLDLDERPVVVQLKWNTDNREG
RFVLKKDKESVKGNSHEKEKGGVIQSFKRTLSRKDKKKENDQTKATDKVSENENGSTEKL
LNNNSICVSNHETEKQQRQAAPGVKHTGSLYPDFSDQPGLPIGIKFSDNSEEALLSAVIN
YTNSSTVHFKLSPAYILYAVGRFALQRHYRRGSPPSGQTHIVTSIANKMVAMTGKVIQRQ
QAIAGALAFWMANSSELLNFLKHDKDLSSLTRQSQLDLSRLVHKAYSCLLQCLQNELRKY
LPTFLIDPEQHGPLPAGIEMVLNTLMNTMSLLRRCRANPAFTIQLFSQLFHFISVWLFNQ
LMRPEADTPGLRSHYWGAALRQRLTAMEAWAERQGLELAADCHLGHIIQATMLLTMNKYS
KQDAKDIQKTCFKLNSLQLQTLLTGYLYATNEPHIPPDLIDAVVMAAEASADNLIRSEGR
DIQLEESLDLHLPFLLPEGGYSCDTVRGIPPGFREFLEPICQKGLCSLTSQPNSKCDWTV
YFSKPSSTSSAEQGPNTYLTVHREPDIVTITLNKPLNSGMGVSIVAAKGAGQENLGIYIK
SIVKGGPAERNGRLTAGDQLLSVDGQSLVGFSQERAAAIMMQTGPVVTLQVAKFGASYHG
LGALLSEPPSKRTAGDKIHAKPNGNAAMLYCVVDPGPSQQLHGSSRRKKDQIMQRNRQLY
RSNPNMITDFSPEDVDEPVDPVLRRNNIAAVSSISLCADTFHRQYLTLPTPKSQDKSPSE
SSPQQTFKVSLRPLDGQRAFMRQALSQENLCVDSGGPLLDKRQTLWQQKDQRAKQTMSHY
SSFPIRSSVSTHDIFSDYCSPTDRQQGSCTSGAGVWRTPFSQHPTPTPSIQPIRIDIPVT
RAVNTQTHAPLTTFQSSSLLAVKMSQTLKVNGSPQNQANQIYACPIPPTKKLPQPSLLPQ
QQRSTTHRDQAAKPQVSITPTKHVSFQEPPTQQKQGAGPIRVQKDPQELSDPRREVLEKQ
QKLHVVELLEQEVQELQAKAKRTAEENNRLRKLSLEWQFQKRLQEIQQRGEDEEEDEDLD
MMVTIQQLEMRTQNKRSSAGNITDYTELEKQTGTHSSQKEVKANTGNCLLIQNQEEKING
VRAPEKLTFKERQRLFSLASSA
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgccggaggaggaagaacgagagaaattagccgaagtcatcagacagtggaacaacaac
agattggatttgtttgaaataagccaacctgatgagaacttggagtttcatggtgtgatg
cgcttctactttgaggaccatgttggaggaaatgtggccacaaagtgcctgcatgtttgc
agcaactcttcaactcaagaggttatcgaaactctttccgagaaattcagacccgatatg
aaaatgctgaccactagttattccctatatgagatccatggcaataaagaacgtaaactg
gatctggatgagagacctgtggttgtacaattaaagtggaacacagacaacagagaaggt
cgttttgtgctcaagaaagacaaggagagcgtgaagggaaacagtcacgagaaagaaaaa
ggaggtgtgatacaaagcttcaagaggacactgtcaagaaaagataagaagaaagagaat
gaccaaactaaagcaacggacaaagtttcagagaatgaaaatgggtcaactgaaaagcta
ctgaacaacaacagcatttgtgtgtctaaccatgagacagaaaaacaacagaggcaggct
gccccgggagtaaaacacacaggaagtctgtatcctgacttttcagatcaacctggatta
ccaattggaattaaattcagtgataactctgaggaagccctcctgtctgcagtcataaat
tacaccaacagctccacagttcatttcaagctctcacctgcatacatcctctatgctgtg
ggacgctttgctctgcaacgccattacaggcgaggctctccaccctcggggcagacgcac
attgtaacctcaattgcaaacaaaatggtggccatgacagggaaggtcatccagaggcag
caggccatcgctggggctctcgccttctggatggccaactcctctgagctgctaaacttc
ctcaagcatgacaaagacctcagctcgctcacacggcaaagtcagctggatctgtcccgc
ctggtacacaaagcttacagttgtctgctacagtgtctacagaatgagttaaggaagtac
ttgccaacgtttctgattgatccggagcaacatggcccactgcccgctggtatagagatg
gtgctgaacaccttgatgaacaccatgtctcttttacgccgctgtcgggccaaccctgcc
ttcaccatccagctcttctcccaactcttccatttcatcagtgtctggctcttcaaccag
ctgatgaggccagaggccgacaccccaggcctacgctcccactactggggagcagctctc
cgccagaggctcacggccatggaagcctgggcggagaggcagggcctggagctggctgct
gactgccacctcggacacattatccaggcaacgatgcttctgaccatgaataaatactca
aagcaagacgcgaaggacatccagaaaacgtgtttcaagttgaactcactgcagttgcag
acgttgctaacaggctacctctatgcaaccaatgagcctcacataccccctgatttgatt
gatgctgtagtgatggctgcggaggcctcggcagataacctaattcggagtgaaggacgg
gacatccagctggaggagagccttgacctccacctgcccttcctgctgccggagggagga
tactcctgtgacactgtgagaggaatccctccagggtttagggaatttttagagccaatt
tgccaaaaaggtctctgctctttaacatcccagccgaactccaaatgtgactggacagtg
tacttcagcaaaccttcctctacttcctcagcagagcaaggaccaaacacatatttgaca
gtacacagagagccagatattgtgacgatcacactgaacaaacctctgaacagcgggatg
ggggtcagcattgtggctgccaagggagcagggcaagaaaacctcggaatttatatcaaa
tctattgttaagggtgggccggctgaaaggaatggcaggctaacagctggggatcagctg
ctgagtgtggatggtcaaagcctggtcggcttcagccaagaaagggcagcagctatcatg
atgcaaactggccccgttgtgaccttacaggttgcaaagtttggagcgagctaccatggc
ctgggggctctgctgagcgaaccaccctcaaaaaggactgcaggtgataaaatccatgct
aagccaaacggtaacgcagccatgctgtactgcgttgtggatcctggtccctcacaacag
ctccatggaagcagcaggagaaagaaagaccagataatgcagagaaacaggcagctttat
cgctccaaccccaacatgatcacagatttttcccctgaggatgtggatgaacctgttgac
cctgttctgagaaggaacaacatcgcggctgtctcaagtatcagtctttgcgctgataca
tttcataggcaatacttgacacttccgactcctaaatcccaggacaaaagcccatctgaa
tctagtccacagcaaacattcaaagtgtctttgaggcctttagatggacagagggccttc
atgcgtcaagccctgtcgcaggagaatttgtgtgtggacagtggaggccccctgctggac
aaaaggcagactttgtggcagcagaaggaccagcgtgccaagcaaaccatgagccactat
tcatctttcccaattcgctcaagtgtttctactcatgacatcttctcagattattgttct
cctacagacagacagcagggcagctgtacaagtggcgctggtgtctggagaactcctttt
tcacaacatccaacacctacgccttccatccagccaatacgtatagacatccctgtaacc
agggcagtgaacacacagacacatgctccgctcaccaccttccagagctcctctttgttg
gcagtgaaaatgagccaaacccttaaagtaaatggaagtcctcaaaaccaagcaaatcag
atttatgcgtgtcccattcctccaaccaagaagctacctcagccctcacttctaccacag
cagcaaagatccaccacacacagggatcaagcagcaaaaccccaagtgagcatcactcca
acaaaacacgtctccttccaagaacctcccactcagcagaagcagggtgcaggtcctata
agggtccaaaaagaccctcaggagctgtctgatccgaggagggaggtgctggagaagcag
cagaagcttcatgtagtggagctcctggagcaggaggtgcaggagctccaggctaaagcg
aagcgcacagcagaggaaaacaaccggctccgaaagctcagcctggagtggcagtttcag
aagaggctgcaggagattcagcagagaggagaggatgaggaggaagatgaggatttggac
atgatggtgacgatacaacagctagagatgagaacacagaacaagagaagctctgctggg
aacatcactgattacacagagttggaaaagcagacaggtactcattcctcccaaaaggaa
gtcaaggcaaacacaggtaattgtttgttaatacaaaaccaagaggaaaaaatcaacgga
gtgcgggctcctgaaaagctcacatttaaggagcgccagcgtctcttttcattggcttcc
agtgcatga
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integrated database retrieval system