Micropterus salmoides (largemouth bass): 119910863
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Entry
119910863 CDS
T07309
Symbol
rab11fip5a
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119910863 (rab11fip5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119910863 (rab11fip5a)
Membrane trafficking [BR:
msam04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
119910863 (rab11fip5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
RNase_Y_N
Motif
Other DBs
NCBI-GeneID:
119910863
NCBI-ProteinID:
XP_038585602
LinkDB
All DBs
Position
Unknown
AA seq
1457 aa
AA seq
DB search
MSSLTVEEDQKWTPTHVQVTVLRGRSLRGKGKQGTSDAYTIIQLGKEKYSTCVVEKTTEP
EWREECSFELQPGVLESGCPAGSNELVLTVMHRALAMDVFLGQAVIQLDKVFHETRYVKN
EWYRLNSKTGKKEKERGDIQVSVQFTRNNLTASMYDLVMKDKGASTFGKLKERIRGKKRS
NEEDSSSAVLPSGYGSLVRMRQRLPSDGGGEEDYEDDEGGEARRSKMRTFFLRGKLRKSS
DTRSSTSLGSESSESSSRGGSLSPTAGISVVVSDLSNSPSNSSNLTVDNSPEHTANTSPR
SSSLKCEFGDEAGEITIAVPQPTVCVNGSHAYKVQPLDPGSGKPANSLGLGVLQKSMPLS
MSLQNVSLRPSTDLLKSPVGDGRRWSFDKPDEEEKAAIVAALEQSGPMLCQEEEWLGQVA
LPKAGSSSTAESESWGKKQRRNLFSHGRSESAGKGQNQSKDESEQASAATEEKHKGWFGS
KDSHSKPSLVVSPKLEPSINPHPPPLTTSHPLSGPSVDPGSLVSPLHHTNPFCHSQTTSP
PISRCNPFFSLLQHNPFYKDMLTAQPLKPSLPPLPYLSSSRPPIAQLFPQASNPNPNLAR
NNPTTEDCIIGIDPKSELMAKDKKQSLSPASTEGDKPLSEKFSNPFMSAGEMEPDSEWDE
SFEAFAAGRLQSPEDLTTDCKTQQNTPGDHPLEHCINKETLLPVTDGDQNTNVNDTLHHQ
LCTGFVSEAHKAIIQVTNTNTYHFDTFAQLLETIPEHTSFEGDNITLKNHTNSPKLAACT
ETNQANSTANTKDLIDTNMHQAPCHTSFVKLNSSSSDPGSSGLGSSAEEDFLSCLSSYSE
KFSASSSEEAEAQNFESNILGFEKSSESAVITPLKPSESENDITETPNDLSSVDATQHCV
IQYRDGDEKVDLNGLEGSLAPQSPVLAHQQPEIAARETGPEDAVTQAPKLSELKPKSNVS
LKSDNENRKKSISQVLNDFSTSGSNTTDVMTSDDELCSTHPSLYITTSSPEVRQSSSDSP
IQSGSLTGQDMSQRLPIPFRPFDNFLNTSHIASSLSQDFEDTLLHTRASNQSTSSFLHSL
YVSTDSQDYQTCESHQSSKCSGSEPNKTLHSANSKLCSELSGIQTTADAALGQEDSTNAC
KTYNKGNNQTDQFKESLCGGTLEPGIMIGVDFGLLPMVSSDSYVSCNPRKLTEGGVEVQH
VILGDVFSKCPQAPKATLHRSHSEGTLTPAVDELLLSSFGSDPGAIQESSSAQPGPELPS
LTSFASYLTPDSSSSPVALCSLPPLANAMPRSPPNKARAAAPKQILQEPQQQQAANQQNS
PHPVKPLTTAMLAEEKRTEGRSVLATGLEKLKSTIHPGRSSQLSEQETDRKKSLTEGAGS
YYHLTHSELVALLVQREVDLERQKAEFERQKCLLAKREVELKKLKPQVKDLEDYIDTLLV
RIMEQKPTLLQVRSKLK
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgctaaccgtcgaggaggaccagaaatggacaccgacacacgttcaggtgacg
gtgctgagaggcaggagcttacggggcaagggcaagcaaggcaccagcgacgcgtacacc
atcatccagctggggaaggagaaatactcgacctgcgtggtggagaagaccaccgagccg
gagtggagggaggagtgctcgtttgagctgcagcccggcgtgctggagagcggctgcccg
gccgggagcaacgagctggtcctcaccgtcatgcaccgggcgctcgcgatggacgtgttc
ctcggccaggcggtgatccagctggataaggtctttcatgagactagatatgtgaaaaac
gagtggtacaggctcaactctaagacggggaagaaagagaaggaacgaggagacattcaa
gtcagtgtccagttcacccgaaacaacctgacagccagcatgtatgacctcgtcatgaag
gacaagggcgcctccaccttcggaaagctgaaagagcgcataagggggaagaagagatcc
aatgaggaggactcgtcgtctgccgttttaccaagtggttacgggtcccttgtccggatg
cggcaacggctgccgagcgatgggggtggggaggaggattacgaggatgacgaggggggc
gaggcccggcggagcaagatgaggacattcttcctgagagggaagctgaggaagtcatca
gacactcgttccagcacatcactaggctcggagagcagcgagtcatcatcacggggtggg
agcctgagccccacggccggcatcagtgtggtggtctctgacctctccaactcacctagt
aacagcagcaacctgacagtcgataacagcccagagcacacggcaaacacgtcacctagg
tcgtcttctctcaaatgtgagtttggtgatgaggccggtgagatcaccatcgcagtgcct
cagcccactgtgtgcgttaatggaagccatgcttacaaagtccagcccctggacccaggc
tcaggaaaacctgcaaattctttaggcctgggagtgttgcagaagtctatgcccctgtcc
atgtctctacagaacgtcagtctgcggccatccacagacctcctcaaaagtcctgttggt
gatggccgccgctggtcttttgacaagcctgacgaggaggagaaggcagccatagtggcg
gccttggagcaaagcggcccaatgctgtgtcaagaagaggagtggttgggacaggttgct
ttgcccaaagctggctcctcctccacggcagagtcagaaagctgggggaaaaagcagagg
aggaacttgttctcccatgggaggagtgagtctgcagggaaagggcagaatcagtccaag
gatgagtctgaacaagcctccgctgccactgaggagaaacacaaggggtggtttggatca
aaggactcgcacagcaaacccagcctggtggtgtcacctaaactagagcccagcattaac
ccccacccaccacccctcacaactagtcaccccctttcaggtccctctgtagatcctggc
tctctggtgtctccactgcatcacactaaccccttctgccactcacagaccacatcacct
cccatatcccgctgcaaccctttcttctctctcctccagcacaaccctttctataaagac
atgctaaccgctcagcccctaaaaccttcactgcctcctttgccctatctctccagttcc
cggccccccatagctcaactctttccacaggcaagtaaccctaaccccaacctggctcgc
aacaatccaaccacagaggactgcattattggtatagacccaaagagcgaattgatggcc
aaagataagaaacaaagtctttctccagcttccacggaaggggataaacctttaagtgag
aagttttccaacccttttatgtcagctggggagatggaaccggattcagagtgggatgaa
tcctttgaagcatttgcagctggtaggctgcagtctcctgaggatctgaccacagattgc
aaaacacagcaaaacacacccggtgaccatccactggaacactgcattaataaagaaaca
ttattacccgtaacagatggtgatcaaaacacaaatgtgaatgatacactacatcatcag
ctttgcacaggatttgtatccgaagcacataaagccatcatccaggtgaccaacactaat
acatatcactttgacacatttgcacaactccttgagacgataccagagcacacaagcttt
gagggtgacaacataactttaaagaatcacactaattctccaaaactggctgcttgcact
gaaactaatcaagctaacagtactgctaatacaaaagatttaatcgacactaatatgcat
caagccccctgtcacacctcatttgtaaagctcaacagcagctcctctgatcctggttct
tcgggtctcgggagttcagcagaagaggatttcctctcctgtctctcttcttattcggaa
aaattctctgcatcctcctctgaggaagctgaagcacagaactttgaaagcaacatcctt
ggctttgagaagtcctctgagtcagctgtgataacacctttaaagccctcagaatctgaa
aatgacattaccgagacgccaaatgatttgtcttcagttgatgcaacgcagcactgtgtt
attcagtacagggatggcgatgaaaaggtagatttaaatggtttggaggggtcattggca
ccacagtccccagtgcttgcacatcagcagcctgaaattgctgcaagagagacaggacct
gaggatgcagttactcaggcaccaaaactctcagaactaaagccaaaatccaacgtttct
ttaaagtctgacaatgaaaatagaaagaaaagcatttcacaagtgttaaatgatttctct
acatccggaagtaacactacagatgtgatgacttcagatgatgaactctgctccacacac
ccatcattatacatcacaacttcctcccctgaggtgaggcagagttcatcggactcgccc
attcagagcggtagtttaacagggcaggatatgagccagcgtttgcctatacccttcagg
ccttttgataatttcctcaacaccagtcacattgcaagcagtcttagccaagactttgaa
gacacactgttgcacactcgggcgtctaatcagagcaccagcagctttctccacagtctt
tatgtaagtaccgactcgcaggattaccaaacctgtgagtctcaccaatcctccaaatgt
agcggctcagagccaaataagacgttacactctgcaaattcaaagctctgtagtgagctg
agtgggattcagacgactgctgatgctgcgttgggccaagaagattccaccaatgcatgc
aagacatacaacaaaggaaacaaccaaacagaccaatttaaagagtctctctgtggagga
actctagagccaggtatcatgataggggttgactttggtttactccctatggtatcctca
gactcttatgtaagttgtaatccaaggaagctcactgaaggaggtgtggaagttcagcat
gtcatcttaggtgacgtgttctcgaaatgccctcaggcaccaaaggctacactacaccgc
tcccactctgaaggcacactgacacctgctgttgacgaactcctcctgtcctcttttggg
agtgatcctggtgcgatacaggagtcctcttcagctcagcctggccctgaactcccctct
ctgacctcctttgcttcctatctaactcctgacagtagtagctcccctgtagcgctctgt
tccctccctccccttgccaatgctatgccgaggtcaccacccaacaaggcacgagctgcg
gcgccaaagcaaattcttcaggagccccagcagcagcaggcagccaatcagcagaacagc
ccccacccagtgaagcccctgaccactgccatgctggctgaagagaagcggactgagggc
cggtcagtgctggccaccggcctggagaagctcaagtccaccatccacccggggaggagc
agccagctcagcgagcaggagacagacaggaagaagtctctgacagaaggagctggctcg
tactatcacctgacccacagtgaactggtcgccctgttggtgcagcgggaggtggacctg
gagaggcagaaggcagagtttgagcgtcagaaatgtttgctggccaagcgggaggtggag
ctgaagaagttgaagccgcaggtcaaagatctggaggactacattgacacgctgctggtg
cgcatcatggagcagaagcccactctcctgcaagtgcgctccaagttaaagtga
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integrated database retrieval system
