Micropterus salmoides (largemouth bass): 119911017
Help
Entry
119911017 CDS
T07309
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03013
Nucleocytoplasmic transport
msam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119911017 (pnn)
03015 mRNA surveillance pathway
119911017 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119911017 (pnn)
03041 Spliceosome [BR:
msam03041
]
119911017 (pnn)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119911017 (pnn)
Spliceosome [BR:
msam03041
]
Complex C
Other components
EJC/TREX
119911017 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
TonB_N
Toxin_trans
Motif
Other DBs
NCBI-GeneID:
119911017
NCBI-ProteinID:
XP_038585842
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MAVVVRSLQDQLEKAKESLKNVDDNIRKLTGRDPNESRPGQIRRLGGPMAGPGGGRGRGI
NLLRRSLSDIGSGGPPAKQRDIEGALLRLAGDQRARRDARHDSDAEDDDDVKKPALQSSV
VATSKERTRRDLIQDQTMDERGKQRNRRMFGLLMGTLQKFKQESNVSTEKQKRRTEIEQK
LEVQAEAEKKKVENEKRELFEERRAKQTELRLLEQKVELAQLQEEWTSHNNRLVKYIRTK
TKPHIFYLPGKMCSATQKLLDDSTKKLNAVFEERCEAFAEHLSKMESRPRRQPNRDQDSN
AAATGMDHSAEGKPAGQVVKVTGNRGGAEMEEEEEEDEEEDRRNEGGRKVTAKEEGKEVL
KKVEEEVEGIELSEEGNEEKKKEGEEGVKDSGDRGEKEASPGSEEMEVEGGPEQEDRSEG
ETQSKQGPTDLQNEKTKDTQFSEPTVTSQEAPNTSHQPQVSHIAGEPAVTSSGILEEKTP
GSQTASTVPGQDIIIPGLEVQDLTVENPAVEGKPGDEAPQKLPDTQAPSVTPAPSKEERD
GRRGRKKEKEPRKGRSHSNSSSSSSSGSSSSGSSSSSSGSSRSSSSSSSSSSSSSNSSRS
RSRDGGKRKRRPSDRGRKKGEERSRHKRGGSSGGGRDSKGSKERRKRSEEGRGRSSRSDR
EHKDRDRKDKRR
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtagtgcggagcttgcaagaccagctcgaaaaagccaaggaaagcttgaaa
aatgtagacgataatattcgtaaattgacggggcgtgatccaaatgaatcaagaccgggt
cagatccgtcgactcggcggccccatggcaggccccggtggaggtagaggcagaggaatc
aacctgctcaggcgtagtctctcagacattggaagcggcggcccccctgccaagcagagg
gacatcgaaggtgccttgctgaggctggcgggggaccagagggccaggagagacgcgcgt
cacgacagcgacgctgaggatgatgacgatgtcaaaaagccggcgttgcagtcgtctgta
gtagctacctccaaggagagaacacgcagagacctcattcaggaccaaaccatggatgag
aggggcaaacagaggaatcggcgtatgtttggtctgctgatggggaccctgcaaaaattc
aaacaggagtccaatgtctcaacagagaagcaaaagcgacgtacagagatcgagcagaag
ctcgaggttcaggctgaagctgagaaaaagaaggtggagaatgaaaagagggagctgttt
gaagagaggagagccaaacagactgagctgagactactagaacagaaagtggaattagct
cagctgcaagaggagtggaccagccacaataatcgtctggtaaaatacattcgtaccaag
accaagcctcatatcttctacctgcctggaaaaatgtgctccgccacacagaaactcctc
gatgactccaccaagaaactaaacgctgtgtttgaggagaggtgtgaggcttttgccgaa
cacctcagcaagatggagtcccgcccccggcgacagccaaaccgcgaccaggacagcaac
gcagcagcaacagggatggaccactcggcggagggtaagccagcaggccaggtagtcaag
gtgacaggtaacagggggggtgcagagatggaggaagaggaggaggaagatgaggaggag
gataggaggaatgaggggggtagaaaggtgacagcaaaggaagaagggaaggaagtgttg
aagaaggtggaggaagaggtggaggggatagagttaagtgaagagggtaatgaggagaag
aagaaggaaggagaggagggggttaaagacagcggggacaggggagagaaggaagcaagt
ccagggtcagaggagatggaggtggagggcgggccagagcaggaggacaggagtgaggga
gaaacgcagagtaaacaggggcccacagacctccaaaacgaaaagaccaaggacacccag
ttctctgaaccgaccgtaaccagccaagaagcaccaaacaccagccaccagcctcaggtc
agccacatcgcaggggaaccagccgttacgtcctctgggattctggaggagaagacccct
gggtctcaaacggcttccacagtgcctgggcaggatatcattatccctggcctcgaggtc
caggacttaacagtcgagaacccggctgtggaagggaagccaggggatgaagcaccccag
aaactgcctgacacccaggcccccagcgttacccctgcaccctctaaggaggaacgggat
ggtaggagagggaggaagaaggaaaaggagccgaggaagggtcgcagtcatagtaacagc
tcctcctcttcctcctccggctcctcctccagcggaagctcctcctcttcctccggatcc
agccgctcctcttcatcatcatcgtcctcttcgtcctcatcgtccaacagcagccgaagt
cgcagccgagacggcggtaagcgcaagagaaggccgtcggacaggggcaggaagaaagga
gaagagagaagtcgccacaagagaggagggagtagcggaggagggagggactcgaaggga
tcgaaggagaggaggaagaggagcgaggaagggaggggcaggtcttcccggagcgatagg
gagcataaagatagagacaggaaggacaagagacgttaa
DBGET
integrated database retrieval system
