Micropterus salmoides (largemouth bass): 119911314
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Entry
119911314 CDS
T07309
Symbol
gigyf1a
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119911314 (gigyf1a)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
119911314 (gigyf1a)
Surveillance factors
Other surveillance factors
119911314 (gigyf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
119911314
NCBI-ProteinID:
XP_038586076
LinkDB
All DBs
Position
Unknown
AA seq
1109 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYIKDNKVPEDM
QDKEFAAILQDEPMQPLALVPLTEEEQRNFSMSVNSVAVLRLMGKGVGGAAPAGVVRGRG
ATRGGRGRGRGEGGFYQRSIEEAEVGFGRSVREIHRSQSWDDRERERRFEKPLRREVGRP
GFEESVGPVGPGRKEYTRADSDNWRTLREEQDEEEGEPGSSWRLTGPRREVLGTASSLMA
VNLLSDGGPRSAGWRDHGPGESRRRKFDFDFRDSEGHGGGRRRAGSEGVEDDRDGLPEWC
TDEEDGEMGTFDSSGAFMPMKKSGKETILEEELEFKGIEEDEEEEIFADTERNCAEGDKD
KEGKEAGSAVGDSETKPASPSSSPPVHCTPPFLEPRPSNTGPVVDNPQLNNSHPVNASST
PSEDVAPVGGSKAQLSPSVPTSSSLPPPPPSSAAPLLPPSGGDTEDDEGMKHLQQEAEKM
VASLQDTSLEEECFTQALQQQQESRNTAAALPLSHEAAMKWFYKDPQGEIQGPFTTVEMC
EWFQAGYFTMTLLVKRGCDEGFQPLGDVIKMWGRVPFAPGPSPPPLLVRQPPPTQRPQPT
RGPAGTVSQSSANVEDGEGRMQRRGKLDRQVTGNLDQERLKKQQELAAAAALYQQLQQQQ
LFQLINRCSEQGMMPSMNRSMSVPDTGSMWDMHTSASQPSGGEASLWDITMNPSTQGPTL
EQLQKLQQERRDAELRAKREEEEQRKRREEKRRQQEEQKRREEEELFRRKQCRQQQELIM
KLLQQTPQQQGPGASGSGWSGAPSSGLAKAGKPQALALLEMQQEAERLLKQQQQQRAQQQ
RDRHSGMSMGSSSMGGQWVDGVGMWGGPGGMEGKSGSGGSSSSMGMWDEAVKNQGGLRGN
SNNNMGLKNSRSSPSLSEQYMMRRKRTEEEEKLLKLLQGMKPQDGFTTWCEQMLHALNTS
ANNSSSSLDVATIVAYLKEVESPYAVLDFIRSYLGDTVEAKEFAKQFLERRAKQKANQQR
QQQQLSKEVAGLNMNFPLQDSMRGMNPSTLQSMFQANHMGKAGLYDNQGGKMKKKQPMML
HSDPSILGYSFHNAGECLSLNEMEMVEDY
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagactcttaacttcggcccagaatggctccgtgcactgtccagtgggggg
agtgtgacgtccccccctccttcacccgccatgccaaagtacaagctggccgagtaccgc
tacggccgagaggagatgttagcactttatatcaaagacaacaaggtcccagaggacatg
caggataaggagtttgctgctattctgcaagatgagcccatgcagccactggcactggtg
cctctcactgaggaggagcagaggaacttctccatgtctgtgaacagtgtggcagtgctg
aggctcatgggaaaaggggtgggtggtgctgccccagctggagtggtcagaggacgaggg
gccacacgaggcggtcgaggacgaggtcgtggtgaaggtggattctaccaaagaagtatt
gaagaggcggaggtgggttttggccgcagtgttcgagagatacaccgcagccagagctgg
gatgaccgcgagcgtgagcgtcgatttgagaagccgctgcgtcgggaggtggggcgtcct
ggttttgaagagtctgtgggtcccgtgggtccagggaggaaggagtacacaagggctgac
agcgataactggcgcaccctccgggaagagcaggacgaggaggagggggagccaggcagc
agctggagactgactggaccccgcagggaggtacttgggacagcatcctcactgatggcg
gtcaatttattgtcagatggcggtcctcgctcagcaggctggcgggaccatggtccaggt
gaaagtcggaggaggaagtttgattttgacttccgggactctgagggtcatggcggtggc
cgccggcgtgcaggaagtgagggagtagaggatgacagggacggcctgcctgagtggtgt
acagatgaggaagatggggagatgggcacttttgactcctctggagctttcatgcctatg
aagaagagtggcaaggagacaatcctggaggaggagttagagtttaaggggatagaggag
gatgaagaagaggagatatttgctgacactgagaggaactgtgctgaaggagacaaagac
aaggagggtaaagaagccggctctgctgtaggggatagtgagacgaagcctgcatcgccc
tcttcttctcctccagtccactgtacccctccgttcctggagcctcgacccagcaacact
ggcccagtggtggacaaccctcagctgaacaacagccaccctgtcaatgccagcagcaca
cccagtgaagatgtggctccggtagggggctccaaggcccagctgagccccagcgtcccc
acctcctccagtctgcctcccccacccccttcctctgctgctcctctcctccctccatct
ggaggagacaccgaggacgacgagggcatgaagcacctgcagcaggaggcagagaagatg
gtggcatcactgcaggacacttctttggaggaggagtgtttcacccaggctctgcagcag
cagcaggagagcaggaacacagcagccgcgttgccgctttcacatgaggctgccatgaag
tggttctacaaggacccacagggagagatccagggtccattcaccactgtggagatgtgt
gagtggttccaggctggctacttcaccatgaccctgctggtgaagcggggctgcgacgag
ggcttccaacccttgggggatgtcatcaagatgtggggccgcgtgcccttcgccccgggg
ccttccccgccgcccctgctggtgagacagccaccaccaacgcagcgcccgcagcccacc
cgggggcccgccgggactgtgagtcagagctcagccaacgtagaggatggggaagggagg
atgcagaggagagggaagcttgatagacaggtcacgggaaacctggaccaggagcgcctg
aaaaagcaacaggagctggcagcagcagcagctctatatcagcagctccaacagcagcag
ctattccagctcattaacaggtgcagtgagcagggtatgatgccttcgatgaacaggtcg
atgtcagtgccagatacagggtccatgtgggacatgcatacctcagcttcacagccgtca
ggcggtgaagccagtctttgggacataacaatgaatccttctactcagggtccaactctc
gaacagcttcaaaagctccagcaggagaggcgagacgctgaactcagggcgaagcgcgag
gaggaggagcagcgtaagaggagggaggagaagaggaggcaacaggaagagcagaagagg
agggaggaggaagagctcttcagacgcaagcagtgtcgtcaacagcaggaactgatcatg
aagttgctgcagcagaccccccagcagcagggtcctggggcaagcggctcaggctggagc
ggggctccctcctctgggcttgccaaggcaggaaagccccaggctctggctctgctggaa
atgcagcaggaggccgagaggctcctgaagcagcagcagcagcagcgagcccagcagcag
agagaccgccactctggcatgtcgatgggcagctcctccatgggagggcagtgggtggac
ggtgttggcatgtggggcgggcctggtggtatggagggcaagagtggcagtggaggctct
tcaagcagcatgggcatgtgggacgaggctgtgaagaaccagggcggcctgcgtggcaac
agcaacaacaacatgggcttgaagaacagccgcagcagcccttctctcagtgaacagtac
atgatgcgtcgtaagcggacagaggaggaggagaagctgctgaagctgctgcagggcatg
aagcctcaggacggcttcaccacctggtgtgaacagatgctgcatgctctcaacacctct
gccaacaactcctcctcctctctggatgttgccacaattgtggcatacctgaaggaggtg
gagtctccctatgcagtgctggacttcatccggtcctacctaggggacacagtggaagcc
aaagagttcgccaaacagtttctggagcgacgtgccaaacagaaagccaaccaacagaga
cagcagcagcagttatcaaaggaagtggctggattgaacatgaacttccctctgcaggac
tcaatgcgaggtatgaatccaagcaccctgcagtccatgtttcaagccaaccacatgggc
aaggctggtctctatgacaaccaggggggaaagatgaagaaaaaacagcccatgatgctg
cactctgaccccagcatcttagggtactcattccacaacgcaggcgagtgtctgagcctg
aatgagatggagatggtggaggattactga
DBGET
integrated database retrieval system
