Micropterus salmoides (largemouth bass): 119911340
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Entry
119911340 CDS
T07309
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit-like isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04010
MAPK signaling pathway
msam04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119911340
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
119911340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119911340
Transcription factors [BR:
msam03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
119911340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Death
CIS_TMP
Motif
Other DBs
NCBI-GeneID:
119911340
NCBI-ProteinID:
XP_038586117
LinkDB
All DBs
Position
Unknown
AA seq
891 aa
AA seq
DB search
MSVRMTEAPFIYDNDLQNLMPYDYLPPVDIKSEPYIPETAHGPYIQIIEEPKQRGFRFRY
ECEGPSHGGLPGASSEKNRRTYPTVKINNYVGHARVEVQLVTHSDPPRVHAHSLVGRHCT
ENGTCMLDVGPNDLTASFSNLGILHVTKKGVGEVLSRRLREERKRQKGPHCHLTEAEENS
ILKEAKELGKVMDLNIVRLKFTAYLQDSQGGFTRALKPVVSNPIYDSKSPNASNLKISRM
DKTCGSVLGGDEIFLLCDKVQKDDIEIRFYEEDDEGGWEAFGDFSPTDVHKQYAIVFKTP
PYHSAEIERPVTVFLQLKRKKAGDSSDPKQFTYIPQIQDKEEVLRKKQKPLPHYESWRGG
GGGGGRGGGAGGFGGGGGGGFQFNQQMNGAGGGGGGAGGVFFTGGFTGFGGGGGAQMSGS
APQTGATQQQTDGQTGSPLQQQLFQIAAALHSRTSQSARQTAAALLQYCSTGDARVLLAI
QRHLCGIQDSNGDTPLHLAIIHQQTSVIHQLIHTLLSSQQQNLLNTANLLRQTPLHLAVI
TRQVKVVEVLLRAGADPSLLDKDGRSPLHLAALAGDNATLRPLLAHLGERHAHLVNAPDY
HGLHPLHLAVRRDGERCLRLLVEGGAKINAPEQKSGNTALHLAVRENLFKVACTLITELK
ADVNSCTFGGNTPLHLAASQGSPTLCSMLIAAGADKNMENDEPLFFSSSSDEEDDTGPIR
EREAASLPVNPRKRPAAGHTPLDLAKCQKVRNLLNSRQSPKSSRHSSKKMKPSEEAETSG
LDEDTLSRLVEVLSVGDVPWEKLAEKLGMMMLTHLYLDSPTPCHHLLQHYQLGGGPVEGL
VEALESLGLTEGVRLLRNTELRDDKHSTDATVDSGFGSQPMEEEEPPMADQ
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcaggatgactgaagctccgttcatctacgacaatgacctgcagaatttgatg
ccgtacgactaccttcctccagtggacataaagagcgaaccctacatacctgagacagct
catggcccctacattcaaatcatcgaagagcccaaacagaggggctttcgtttccgttat
gaatgcgagggtccatcccatggcgggctcccaggggcctccagcgagaagaacaggaga
acctacccaaccgtgaagatcaataactacgtgggccacgcccgggtggaggtccagctg
gtgacccactccgatcctcctcgtgtccacgctcacagtctggtgggacgccactgcacc
gagaacggcacttgcatgctggacgtcggccccaacgacctcacggcctccttcagtaac
ctggggatcctccatgtgaccaagaaaggagtgggggaggtgctgagcaggaggctgagg
gaggagaggaagaggcagaaaggacctcactgccacctgacagaagcagaggaaaactcc
atcctgaaggaggccaaggagctgggcaaagtgatggacctgaacatagtcaggttaaag
ttcaccgcttacctgcaggacagccagggaggcttcaccagagcactgaagcccgtcgtc
tccaaccccatctacgacagcaagtcgccgaacgcctccaacctgaaaatctctcggatg
gacaaaacgtgcggctcggtgctcgggggagacgagatcttcctgctctgtgacaaagtc
cagaaagacgacatcgagatccgtttttatgaggaggacgacgagggaggctgggaggcg
ttcggcgacttctcccccacagatgtccacaaacagtacgccatcgtgttcaaaacgccg
ccctatcacagcgcagagatcgagcggcccgtcaccgtcttcctgcagctgaagaggaaa
aaggccggcgacagcagcgaccccaaacagttcacctacataccgcagatccaagacaaa
gaggaggtgctgagaaagaagcagaagccgctgcctcactatgaatcctggaggggaggc
ggaggaggaggaggacgaggtggaggagccgggggatttggaggaggaggaggaggagga
ttccagttcaaccagcagatgaatggagcaggaggaggaggaggaggagcgggaggagtt
ttcttcaccggaggcttcacaggatttggcggagggggaggggctcagatgtcaggctcc
gcccctcagacaggggccacccagcaacagacagacggacagaccggctctccactacag
cagcagctgtttcagatcgctgccgccctgcacagcagaacctcccagagcgcccgacag
accgctgccgccctcctgcagtactgcagcaccggggacgcccgggtccttctggcaatc
cagagacacctctgtggcatccaggacagcaacggagacactcctttgcacctggccatc
atccatcagcagaccagtgtgatccatcagctgatccacactctgctgagcagccagcag
caaaacctcctcaacaccgccaacctcctccgacagacgcctctccacctggccgtgatc
acccggcaggtgaaggtggtggaggtgttgctgagggcgggggccgaccccagcctgctg
gacaaagatggccgtagtcccctccacctggcggctctggccggagacaacgccacactg
cgccccctgctggctcacctgggggagcggcacgctcacctggtcaacgcgcccgactac
cacggtcttcatcctctccacctggcggtgaggagggacggcgagcgctgcctccgtctg
ctggtggagggcggagccaaaatcaacgcacctgagcagaagagcggaaacaccgccctc
cacctggccgtcagggaaaacctgttcaaggtggcctgcactctcatcacagagctgaag
gcggacgtcaactcgtgcacgtttggaggaaacacacctctccacctagcggccagtcag
ggctcgccgaccctctgctccatgctcatcgctgcaggcgctgataagaacatggagaac
gacgagccgcttttcttcagctcctcttcagacgaagaagacgacaccgggccaatcaga
gagcgcgaggccgcctcactgccagtcaaccctcgcaagagacctgcagcgggacacacc
cctctggacctcgccaagtgccaaaaggtgcgaaacctgttaaactccagacagagtccg
aagtcgagtcgtcacagcagtaagaagatgaaacccagtgaagaagcggagacttcgggg
ctggacgaggacacgctgtcccggctggtggaggtgttgagtgtcggagacgttccctgg
gaaaaactggcggagaagctggggatgatgatgctgactcacctgtacctggacagtccg
acgccgtgccaccacctgctgcagcactaccagctgggtggaggtccagtcgaaggtctg
gtcgaagctcttgagtctctcggtctgacagaaggagtccgactgctgagaaacaccgag
ctgcgagacgacaaacacagcacagacgctacggtcgacagcggtttcggcagccagcca
atggaagaagaggagccgcccatggccgatcagtga
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