KEGG   Micropterus salmoides (largemouth bass): 119911372
Entry
119911372         CDS       T07309                                 
Symbol
sox17
Name
(RefSeq) transcription factor SOX-17
  KO
K04495  transcription factor SOX17 (SOX group F)
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:msam00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    119911372 (sox17)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:msam03000]
    119911372 (sox17)
Transcription factors [BR:msam03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    119911372 (sox17)
SSDB
Motif
Pfam: HMG_box Sox17_18_mid HMG_box_2 HMG_WDHD1 HTH_24
Other DBs
NCBI-GeneID: 119911372
NCBI-ProteinID: XP_038586187
LinkDB
Position
Unknown
AA seq 400 aa
MSSPDAGYASDDQTQARCTMSVMMPGMGHCQWADPLSPLGDTKVKNEPCVSGSGSQNRGK
NEPRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALPVTEKQPFVEEAER
LRVQHMQDHPNYKYRPRRRKQVKRIKRLDSSFLVHGVSEHQASSMSGDSRVCVESLGLGY
HEHGFQLPPQPLSHYRDAQALGGPSFETYSLPTPDTSPLDAVESDSMFFSPHSQEDCHMM
PAYSYHSQAAEYQPQDPLSNHHSNPILHRHPASAQEQPHQSATLPPSYMGCPNPLAMYYT
QHCSPSHPKRHPGGAGQLSPPPDSHSHSADSVEQMHHSELLAEVDRSEFEQYLSSSSARA
DMTGLAYGPHEAGMQGPESLISSVLSDASTAVYYCSYNNS
NT seq 1203 nt   +upstreamnt  +downstreamnt
atgagcagtcccgatgcgggttacgccagcgacgatcagacccaggcaaggtgtacgatg
tcagtcatgatgcctggaatgggacactgtcagtgggccgaccctctcagtcctcttggg
gacaccaaagttaaaaacgagccgtgcgtctccggctccggcagccagaatcgcggaaag
aacgagccgcggatccgacggcccatgaacgcgtttatggtgtgggcgaaggatgagcgc
aagagactggcgcagcaaaacccggacctgcacaacgcggagctgagcaaaatgctgggg
aaatcatggaaagcccttcctgtcacagaaaagcagccctttgtggaggaggccgagcgg
ctgcgggttcagcacatgcaggatcaccccaactataagtaccggccccggcggcggaag
caggtgaagaggattaagaggctggactctagctttctagtgcacggcgtgtccgagcac
caggcctcgtcaatgtccggggacagcagagtgtgtgtggagagtctcggcctgggctac
cacgaacatggcttccagcttcctccacagccgctcagccactaccgagatgctcaggct
cttgggggcccctcctttgaaacctacagcctccctacgcctgacacctctcccctggac
gctgtagagtcagactccatgttcttctctcctcattcacaagaggactgccacatgatg
cctgcatactcgtaccactcccaggctgcagagtaccagccccaggaccccctctcaaac
caccacagcaaccccatcctgcaccgacaccctgcctcagctcaagagcagccccatcag
tctgccacccttcccccttcctacatgggatgccccaaccctctggccatgtattacacc
cagcattgcagtcccagccaccccaagcggcatcctggtggggcaggacagctctccccc
cctcctgactcccattctcactcagcagacagcgtggagcagatgcaccactctgagctg
ctggctgaggtggaccgcagcgagttcgagcagtatttgagttcctcttcagcacgtgcg
gacatgacaggcttggcgtacgggccacacgaggccggcatgcaaggacctgaaagcctc
atatcatcagtgctgtcagacgccagcacagctgtgtattactgtagctacaacaactcc
taa

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