Micropterus salmoides (largemouth bass): 119911394
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Entry
119911394 CDS
T07309
Symbol
vps41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04140
Autophagy - animal
msam04148
Efferocytosis
msam05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119911394 (vps41)
04148 Efferocytosis
119911394 (vps41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119911394 (vps41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119911394 (vps41)
Membrane trafficking [BR:
msam04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
119911394 (vps41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
zf_RING_Vps8_fungal
WD40_Prp19
Beta-prop_RIG_2nd
TPR_7
Beta-prop_HPS5
Vps39_1
WD40_WDHD1_1st
Beta-prop_EML_2
zf_RING_Vps8
TPR_19
TPR_PEP5_VPS11
Helicase_PWI
TPR_GEMI5
zf-RING_5
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
119911394
NCBI-ProteinID:
XP_038586219
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MAEVEDQGRKQSEEFTDESEEEDSEEEPKLKYERLSNGVTEILQNDAASCMTVHDKFLAL
GTHFGKVFLLDIQGNVTQKFEISSVKINQISLDESGEHVGICSEDGKVQVFGLYTREGFH
ENFDCPIKVVALHPQFTRSNYKQFVTGGNKLLLYERNWLNRWKTSVLHEGEGSITNIQWR
VNLIAWANNVGVKIYDIGTKQRITNVLRDNVSLRPDMYPCSLCWKDNATLIVGWGTSIKI
CVVKERNPTEMRDLPSRYVEIVSAFETEFFISGLAPLADQLVTLFFVKENSDHMDEEFRA
RPRLDIIQPLPESCEEISSDALTVRHFQDNECRDYRLEHSEGESLFYIISPKDIVVAKER
DQDDHIDWLLEKKKYEEALMAAEISFKNIKRHDVQKIGMDYINHLVEKGDYDSAARKCQK
VLGKNMELWENEVYRFKTIGQLKAISQYLPRGDLRLRPAIYEMILHEFLKTDYEGFATLI
REWPGELYNNMAVVQAVTDHLKRDPTNRTLLTTLAELYTYDQRYDRALEIYLRLRHKDVY
QLIHKHNLFRSIEDKIVLLMDFDKEKAVDMLLDNEDKISTDRVVEELADRPELLHVYLHK
LFKRDHHKGQKYHERQIVLYAEYDRPNLLPFLRDSTHCPLEKALEVCQQRNFVEETVFLL
SRMGNCRRALQMIMEELEDVDKAIEFAKEQDDAELWEDLISYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLQKMHRTQM
RGVRVDEENICESCLATILPSDMAKPFSVVVFHCRHMFHKECLPSTGTVPGVQFCNICSA
KKRGPGSGILEMKK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagtggaggaccagggcagaaaacaaagtgaggaattcacagatgagtctgag
gaggaggacagcgaggaggagcccaagctgaagtatgagaggctctccaatggggtgaca
gaaatcctccagaatgatgcagccagctgtatgaccgtccatgacaagtttcttgcccta
ggtacccattttggaaaggtcttcctgctggacatccaaggaaatgtaacccagaagttt
gaaattagttcagtgaagatcaaccagatcagtctggatgaaagtggagagcatgtgggc
atctgctccgaggatgggaaggtgcaagtgttcggcctctatacaagagagggcttccat
gagaactttgactgtcccatcaaagtggtggcgttacatcctcagttcaccagatcaaac
tacaaacagtttgtcactgggggcaacaagctgcttctgtatgaaagaaactggttgaat
cgctggaagacctctgttctacatgaaggcgagggttcaatcactaatatccagtggaga
gttaacctcattgcgtgggccaacaatgtgggagttaaaatctacgatatcggtacaaaa
cagcggatcacaaatgtgctgcgggataatgtcagtctgaggcctgacatgtacccctgc
agcctgtgttggaaagacaacgccactctcattgttggctggggaacttccattaagatt
tgcgttgtgaaagagcgaaatcctactgaaatgagagatctgcccagtcgttatgtggaa
atagtgtctgcgtttgagactgagtttttcatcagtggtctggcgccgctggctgatcag
cttgtcaccctgttctttgtgaaggagaactctgatcacatggacgaggagtttcgtgcg
cggcctcgcctcgacatcatccagcctctccctgagagctgtgaggagatttcttcagat
gcgctgactgtgcgccactttcaagacaacgagtgcagagactaccgcctcgagcattct
gagggagagtcgctcttctacatcatcagtcccaaagacattgttgtggccaaggagcga
gaccaagatgaccatatcgattggctgcttgaaaagaagaaatatgaggaggctctgatg
gctgcggagatcagcttcaaaaacatcaagagacatgatgttcagaaaatcgggatggat
tacatcaaccacttagtggagaaaggagactatgacagtgctgcgaggaagtgtcaaaag
gttcttggaaaaaacatggaactatgggaaaatgaagtatacaggttcaagaccatcgga
cagttgaaggccatcagtcagtatttgcccagaggggatctgcgtctcagaccggccatc
tatgaaatgatcttgcatgaattcctcaaaactgattatgagggttttgccacgctgatc
cgggaatggcctggagagctttataataacatggccgttgttcaagcagtcaccgatcac
ctgaagagggaccccactaacagaaccttgctcaccacattggctgaactgtacacatac
gaccagcggtacgacagagccttagagatctacctgagactgaggcacaaagatgtttac
cagctgatccacaaacacaaccttttccgctccatagaggacaagatcgtactcctcatg
gactttgacaaagagaaagctgttgacatgcttctcgacaatgaagacaagatatcgaca
gacagggtagtggaagaactggcagacaggcctgagcttctgcatgtgtacctccataaa
ctgttcaagcgagaccaccacaaaggccaaaaataccacgagagacagattgtcctgtat
gccgaatacgaccggccaaacctcttacctttcctgagagatagcacacactgcccgctt
gaaaaggctcttgaggtttgtcaacaaaggaactttgtagaggagactgtcttcttgctc
agcaggatggggaactgcagacgagctctgcagatgatcatggaggagctggaggatgtg
gacaaggccatagagtttgctaaagagcaggacgatgcagagctctgggaggatctcatc
tcatactctattgacaaaccaccatttatcactggcctccttaataacattggtactcat
gtggatcccatcctgctcatccatcgcattaaggagggtatggagatcccaaacctcaga
gattcactagtaaaaatcctccaggactacaatctacagattcttctgagggaaggatgt
aagaagatactggtggccgactccctctccctgctccagaagatgcaccggacacagatg
agaggagtcagggtcgacgaggagaacatttgcgaatcgtgtcttgctaccatattaccg
tcagacatggccaaacccttcagcgtggtggtgtttcactgcagacacatgtttcacaag
gaatgtttaccatccacaggaacagttcccggggtgcagttttgtaacatctgcagtgcg
aagaagcgcgggccaggaagtggaatcctggagatgaaaaagtaa
DBGET
integrated database retrieval system
