Micropterus salmoides (largemouth bass): 119911454
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Entry
119911454 CDS
T07309
Symbol
rps27a
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03010
Ribosome
msam04120
Ubiquitin mediated proteolysis
msam04137
Mitophagy - animal
msam04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
119911454 (rps27a)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119911454 (rps27a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119911454 (rps27a)
04137 Mitophagy - animal
119911454 (rps27a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
msam03011
]
119911454 (rps27a)
04121 Ubiquitin system [BR:
msam04121
]
119911454 (rps27a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msam04147
]
119911454 (rps27a)
Ribosome [BR:
msam03011
]
Ribosomal proteins
Eukaryotes
Small subunit
119911454 (rps27a)
Archaea
119911454 (rps27a)
Ubiquitin system [BR:
msam04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
119911454 (rps27a)
Exosome [BR:
msam04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119911454 (rps27a)
Exosomal proteins of colorectal cancer cells
119911454 (rps27a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Dsc3_N
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
119911454
NCBI-ProteinID:
XP_038586265
LinkDB
All DBs
Position
Unknown
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRE
CPADECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttcgtgaaaaccctcacggggaagaccataaccctcgaggttgagccttct
gatactattgaaaatgtcaaggccaaaatccaggacaaagagggtatccctcccgaccag
cagaggttgatcttcgctggaaagcagctggaggacggacgcacgctgtccgactacaac
atccagaaggagtccacgctgcacttggtgctgaggctgcgaggtggtgctaagaagagg
aagaagaagtcctacaccacccccaagaagaacaagcacaagaggaagaaggtcaaactc
gctgtgctcaaatactacaaggtggacgagaacgggaaaatccaccggctgaggcgcgag
tgtcccgccgacgagtgcggcgccggcgtcttcatggcgagccacttcgaccgccactac
tgcgggaagtgctgcctcacctactgcttcaacaagcccgaggacaagtag
DBGET
integrated database retrieval system
