KEGG   Micropterus salmoides (largemouth bass): 119911646
Entry
119911646         CDS       T07309                                 
Name
(RefSeq) poly(U)-binding-splicing factor PUF60-like isoform X1
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119911646
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:msam03041]
    119911646
Spliceosome [BR:msam03041]
 Complex A
  U2 snRNP components
   U2 related factors
    119911646
 Complex B
    119911646
SSDB
Motif
Pfam: RRM_1 DUF1543
Other DBs
NCBI-GeneID: 119911646
NCBI-ProteinID: XP_038586528
LinkDB
Position
Unknown
AA seq 546 aa
MAVTETAGGEALTMENGQGTGSKLGLPPLTPEQQEALQRAKKYAMEQSIKSVLVKQTIAH
QQQQLTNLQMAAVTMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFA
PFGPIKSIDMSWDSVTMKHKGFAFVEYDVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQ
AQPIIDQLAEEARAFNRIYVASVHPDLSDDDIKSVFEAFGRIKSCTLARDPTTGRHRGFG
FIEYEKPQSALDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPTTPGGLPPAAAVAAAAAT
AKITAQASMNPFQRDLMAFQEAVAGASVLGALAAPQLLGQQMGIPQAVMAAQAPGVITGV
YQDMSVTPVRPPIPVLPQVGLVNPVLASPPVLSNQAGGSNQQERKEEKEEMLQDGTGQEM
LSDQEHMSISGSSARHMVMQKLLRKSESTVMVLRNMVGPEDIDDDLEGEVTEECGKFGCV
NRVIIYQEKQGEEEDADIIVKIFVEFSMASEMNKAIQALNDRWFGGRKVVAEVYDQDRFN
SSDLSA
NT seq 1641 nt   +upstreamnt  +downstreamnt
atggcggttacggagactgcgggaggtgaagctctgacgatggaaaatggacagggcaca
ggctccaagcttggccttccgcctctcactccagagcagcaggaggcacttcagagggca
aagaagtatgccatggaacaaagcattaagagtgtgttggtgaagcagaccatcgcccat
cagcagcaacagctcaccaacctgcagatggcagcagtgacaatgggctttggagatcct
ctctcacctttacaatcggtggcagctcagcggcaacgtgctctagccatcatgtgtcgg
gtgtatgtaggctccatatactatgagcttggtgaggacaccatcagacaggcctttgcc
cccttcggcccgatcaagagcattgacatgtcttgggattctgttacaatgaaacacaag
gggtttgcctttgtggagtatgacgtgccagaggctgctcagctggctctggagcagatg
aactcagtcatgttgggggggcgaaacataaaggttgggcggccaagtaacatcggtcag
gcgcaacccatcattgaccagctggcagaggaggcacgtgcctttaaccggatctatgtg
gcgtccgtccaccctgacctgtcagacgatgacatcaagagtgtgtttgaggccttcgga
aggatcaagtcttgcacgttagcgagagaccccaccacagggcgacacagaggctttggc
ttcattgaatatgaaaagcctcagtcagccctggatgctgtgtcttctatgaacctcttt
gacctggggggtcagtacctacgggtgggcaaagcagtgactccgcccatgcccctactg
acccccacgacccctggtggtctgccgcctgctgcagctgtggctgcagcggcagccact
gctaagataacggcccaggcaagtatgaatcccttccaaagggatttaatggccttccag
gaggctgtagccggcgcatcagtcctgggggcgttagctgcgccccaacttctcggtcag
caaatgggaataccccaggctgttatggctgcccaggcaccaggggtcatcacaggtgtg
taccaagacatgagcgttactccagtgcgtcctcccataccagtgcttccccaggttggt
cttgtgaaccccgtgctggcatcaccaccagtcctgtctaatcaagctggtggctccaac
caacaagagaggaaagaagagaaagaggagatgctgcaggatggcacagggcaggagatg
ttgagcgaccaagagcacatgagcatctcaggcagcagtgccagacatatggtgatgcag
aaactgcttagaaaatcagagtcaacggtgatggtgcttcgaaatatggttggaccagag
gacattgacgacgacctggagggtgaggtgacagaagagtgtgggaagtttggctgtgtc
aacagagtcatcatataccaggaaaagcaaggagaagaggaggatgcagatatcattgtc
aaaatatttgtagagttttccatggcctcagagatgaacaaagccatccaggccctcaat
gaccgctggttcggtggtcgcaaagttgtcgcagaggtgtacgaccaagaccgtttcaac
agcagtgacctctcggcatga

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