Micropterus salmoides (largemouth bass): 119911725
Help
Entry
119911725 CDS
T07309
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
119911725 (scrib)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_14
LRR_4
PDZ_2
LRR_1
LRR_13
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
119911725
NCBI-ProteinID:
XP_038586553
LinkDB
All DBs
Position
Unknown
AA seq
1784 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCNLQTVPDEVFRYSRSLEELLLDANQLKELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCRALEIADFSGNPLSRL
PDGFTQLRALAHLALNDVSLQTLPNDIGNLANLVTLELRENLLKSLPTSLSFLVKLEQLD
LGSNELEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRRLVCLDVSENRLEELPSELN
GLLALTDLLLTQNLLEVIPDTIGCLKQLSILKVDQNRLTHLTDSIGECENLTELVLTENL
LQSLPRSLGKLKKLTNLNVDRNRLGSVPKELGGCASLNVLSLRDNRLGKLPAELADATEL
HVLDVAGNRLQNLPFALTNLNLKAMWLAENQSQPMLKFQTEDDEHTGEKVLTCYLLPQQP
SPSLENLLHNSVDDSWTDSNLNRVSVIQFQEETKAEEEDDEAAAERRGLQRRATPHPSEL
KVMKKVIEERRNEAYTSRPDGEESPNPQEKRLSDLSNQSRDSQVSNSTLSATSHEDRQNV
TAASHREDLVDGHSPQEDEELDEMEVEYIEPTVHFAEEPIFRGGDEDDEEDGERSDVEDE
RPAFPAEKQRLIRKDTPHYKKHFKITKLPKPETVAALLEGFSPNSLNSPTQAAENEQDEE
EEEEEEEQEQEEQSICTPQHHHRMEALEDSRLQVNSSQVKGVSFDQVNNLLIEPARIEEE
EHTLIIQRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVKVGDKLLEVNG
VDLHEAEHHTAVEALRSSGATVSMTVLRERMVEPENAITTTPLRPEDDYFPRERRSSGLA
FNLETTPSGPQQRLSTCLIRNDKGLGFSIAGGKGSTPYRTGDTGIYISRIADGGAAHRDS
TLRVGDRVISINGVDMTEARHDQAVALLTGTSPTIALLVERDPNAPVGSPGQSRARAHSP
PPPEPSDSPDQEEEGLSLHGNHLSQMEDEYPIEEVTLVKSGGPLGLSIVGGSDHASHPFG
VNEPGVFISKVIPHGLACQSGLRVGDRILEVNTIDLRHATHQEAVRALLANKQEIRMLVR
RDPSPPGMQEIVIQKQPGEKLGISIRGGAKGHAGNPFDATDEGIFISKVSSTGAAARDGR
LQVGMRILEVNNHSLLGMTHTEAVRVLRAVGDSLVMLVCDGFDPRKESAVEASPGIIANP
FTTGIVRKNSMESISSIDRDLSPEEMDIMQKESEMVRETSQWEREEMEKVERMRLEREEA
TRLLEEETENIGTGPLKLDYKTLAALPTTSLQKLNRAPPSDFTRTDSPIREAPYSPIIQP
ANVHYTSSPTAKDDISSSTRPGAIQPVGRVRQSNSPATPDGHSPNPFQHGPSPFNSQTSD
LYGVRNNFHPKQPSPEPELNNEVFDDDIDGQEGAGKGVSSKFSPRREYISLAAVPRLSRV
STDLQSPSPSGRGTPEQRSFRDRQKYFEIDVKQQTPDKPKPRVSLVGEDDLKKMREEEER
KFEQRAREYLLDEDDDEEEEEDLAKQVAQMKASGKVLLDGVEYNVEPVSTPSQHCSTPPS
YNATPPSYCGSSGPSSVDGKGDSQRNSLEDGFRLEQRPNSMTGLIPVYPGETAAPIRTAK
AERRHQDRLRMQSPELTVAPDKDLSPAEKRALEAEKRAMWRAARMKSLEQDALKAQMVIA
KSRDGKKRGTLDQLTESPSPAPTPSPTPMEELSPRGLTSPGRLSPDTVDDVQFHDDGSTN
PGPTASPEVSTPLPATSALEEMALYSNKRKLRQGRRSLETAVPT
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatccccctgtggcgctgcaaccgccacgtcgagtcggtggacaagcgg
cattgcaacttgcagacagtccctgatgaggtgttccgctacagtcgcagcctggaagaa
cttctcctcgatgccaaccaactcaaagagctaccaaagcctttcttcagactactgaac
ctacggaagctcggcctgagtgacaatgagatccagagactccctcctgaggtggccaac
ttcatgcagctcgtggaactggacatctccagaaacgacattcctgagatccctgagagc
attaagttttgcagggccttggagatcgcagacttcagtggaaatcccctgtccagattg
ccggatggtttcactcagctccgagcgttggcacacttggcactcaatgatgtgtcgttg
cagacgttgcccaacgacattggaaacctggccaacctggtgacgctggagctcagggag
aacctgctcaagtctcttcccacgtcgctctctttcctggtgaaactggaacagctggac
ctgggcagcaatgaactggaagttttgccggatacccttggtgctcttcccaacctgagg
gagctatggctggaccgtaaccagttgtcctcattaccaccagagctggggaacctccgg
agactggtgtgtctggatgtgtccgagaatcgtctggaggagcttccctcagagctgaac
ggcctcctggctctcactgacctgctgctcacacagaacctgctggaggtcatcccagac
accataggctgcctgaaacagctgtccatcttgaaggtggaccaaaatagactgacccac
ctgactgattcaataggagagtgtgaaaacctcacagaactcgtcttgacagagaacctt
ttacagtcacttcctcgctcgctgggcaagctgaagaagctgaccaacctgaatgtagac
cgtaaccgcttgggcagcgtgcccaaagagctgggcggctgtgccagcctcaacgttctc
tctttgagagacaaccgcctgggcaaactgcctgctgagcttgcagatgccactgagctg
catgtgttggatgtggctggaaacagattacaaaacctgccttttgccctgacaaacctc
aatctgaaggccatgtggctcgcagagaaccagtcacagccaatgctcaagtttcagact
gaggacgacgagcacacaggagagaaggtgttgacctgctatttgctgccccagcagcct
tctccgagcctagagaacttgctgcataacagtgtggatgacagttggacagacagcaac
ctgaaccgagtgtcagtcattcagttccaggaagagaccaaggctgaggaggaggatgat
gaggctgctgcagagcgcagaggtctccagcgcagagccacgccgcaccctagtgagctg
aaggtgatgaagaaggtgattgaggagaggaggaatgaagcttacacatccaggcctgat
ggagaagagtctcctaatccacaggagaagcggctcagtgacctctccaatcagagccgt
gactcccaggtgtccaatagcacactgtcggccacctcccatgaggacagacaaaatgtg
actgcagcctcgcacagggaggatcttgtagatggccactcccctcaggaggacgaagag
ctggatgaaatggaggtggagtacattgagcccactgtgcactttgcagaggagcccatc
ttccgtggtggcgatgaggacgacgaggaggatggtgagaggagtgatgtggaagacgag
aggccggcttttcccgcagagaagcagcgtctgatcagaaaggacacgccacactacaag
aagcacttcaagatcaccaagctgcccaagcccgagacggtggctgcgttgctggagggc
ttcagtcccaactccctcaactctccgacacaggctgctgagaatgagcaggatgaggag
gaggaggaggaggaggaggagcaggagcaggaagagcaaagtatatgcacccctcagcat
catcacagaatggaggcacttgaggacagccggctccaggtcaattccagtcaagtaaag
ggggtgtcatttgatcaagtcaataatctgctgattgaacctgctcgaattgaggaggaa
gagcacaccttgatcatccagcgacaaacaggtggcctgggtatcagcattgctggaggg
aaaggatctacaccgtacaaaggagatgacgagggaatcttcatctcaagagtatctgag
gagggtccggcagccagagcaggggtgaaagtaggagacaaactcctagaggtgaatgga
gtggacctccatgaagcagaacatcacacagcagttgaagctcttcgtagctctggtgct
acagtttccatgacagtgctacgggagcgtatggtggagccagagaatgccatcaccacc
acgccactgcggccagaggatgactacttcccgcgggagagacggagcagtggcctcgcc
ttcaacttggagacgactcccagtgggcctcagcagcgactctctacctgcctgatccga
aacgacaaggggctgggattcagcatcgcagggggtaaaggctccacgccctaccgcaca
ggagacacgggaatctatatctctcgcatcgcagacgggggagcggcacacagagacagc
acgctgcgagtaggcgacagggtaatctctatcaatggtgtagacatgacagaggccagg
catgaccaggcagtagcgcttcttaccggcacctcccccaccatcgccctcctagtggag
cgagacccgaatgcaccagtgggctctccaggtcaatcccgggcacgagcccactcccct
ccacccccagaaccctcagattcaccagaccaggaggaggaaggcctttcccttcatggg
aaccacctgagccagatggaggacgagtatcccatcgaggaagtgaccctggtgaaatca
ggcggccctctaggcctgagcatcgtaggaggcagcgatcatgccagtcacccattcggc
gtcaatgaacctggggtgttcatctcaaaggtgattcctcacggtttagcgtgtcaaagt
ggactgcgtgttggggaccgaatattagaagtgaacaccatcgacttgcgccatgccaca
caccaggaagctgtgcgagccctgctggccaacaagcaggagatccgtatgttagtacgg
agggacccttcaccgcctgggatgcaggaaattgtgatccagaagcagcccggggagaag
cttggcatcagtattcgtggaggggccaagggtcacgcaggaaacccctttgacgccaca
gatgaaggcatcttcatctctaaggttagttcgaccggtgcagcagcaagagacggccga
ctgcaggttggcatgcgtatcctggaggtgaacaatcatagcctgctggggatgacgcac
acggaggcagtgcgagtgctccgtgctgtcggagactccctggtcatgctggtgtgtgac
ggcttcgacccacgaaaggagtctgccgtggaggcgtctcctggcatcattgccaaccca
ttcacaacaggcatcgtccgcaagaacagcatggaaagcatctcttctatagaccgagac
ctgagcccagaggagatggacatcatgcagaaggagtctgagatggtgagagagacgtcg
cagtgggagcgagaagagatggagaaagtggagcgtatgcgcttggagcgtgaggaggca
actcgcctgctagaagaggagactgagaacattggcaccggacctctaaaacttgactac
aaaaccctggctgcgctgcccacaaccagtctgcagaaactcaatagggcgccaccttct
gatttcaccaggacggacagcccaatcagggaagcaccttattctcccatcatccaaccg
gccaacgttcattacacctcatctcctactgccaaggatgacatttcctcatcaacgcga
ccgggtgccatccagccagttgggcgcgtgcgccagagtaactcccctgccactccggac
ggtcacagtcccaaccccttccagcatggcccctcccccttcaactcccagacctctgac
ctgtatggtgtgaggaacaatttccacccaaagcaaccttctccagagcctgagttgaac
aacgaggtgtttgatgatgacatagatggtcaggagggagctggtaagggtgtgagcagc
aagttctccccccgtcgggagtatatcagcctggcagcagtgcctcgcctctccagggtt
tccacggacctgcagagtccttctcccagtggtaggggcaccccagagcagcgctcgttc
agggaccgacagaagtattttgagattgatgtgaagcagcagacgccagacaaacctaaa
cctcgagtctctcttgttggagaagatgacctcaagaaaatgagggaggaagaagagaga
aagtttgagcagcgggcgcgggagtacttgctggatgaagacgatgacgaggaggaagag
gaggacctggctaagcaggtggcacagatgaaggcctccggcaaagtgttgttggatgga
gtggagtacaacgtggagccagtatccaccccatcccagcactgctccacaccaccaagc
tacaacgccacaccaccgagctactgtggcagctcagggccatcctctgttgatggtaag
ggagactctcagaggaattcactggaggatggcttcaggctggagcagaggcccaactcc
atgactggtctgatcccggtgtatcccggagagacggcggctccaatccgcactgccaaa
gcagagcgcagacaccaagacagacttcgtatgcagagccccgagctgactgtggcccct
gacaaggacctgtcccctgctgagaaacgagctctggaggctgagaagagagccatgtgg
agggcagcacgaatgaagtctctggagcaggatgcactgaaggctcagatggtcatcgcc
aagtctcgggacgggaagaaacgtgggacactagaccaactgacggagtcgccctcgccc
gcccccacaccctctccaacacctatggaagagctcagtcctcgaggactaacctctcca
ggccggctgtcccctgatacagtcgatgacgtgcagttccacgacgatggctccactaac
ccagggcctactgcaagtcctgaggtctccaccccgctgcctgccacctcagccctggag
gagatggccctttacagcaacaagcgcaaactgaggcagggccgccgcagcctggaaacc
gctgtgcccacgtaa
DBGET
integrated database retrieval system