Micropterus salmoides (largemouth bass): 119911757
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Entry
119911757 CDS
T07309
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119911757 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msam03041
]
119911757 (dhx15)
03009 Ribosome biogenesis [BR:
msam03009
]
119911757 (dhx15)
Enzymes [BR:
msam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119911757 (dhx15)
Spliceosome [BR:
msam03041
]
Complex A
U2 snRNP components
U2 related factors
119911757 (dhx15)
Complex B
119911757 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
119911757 (dhx15)
Ribosome biogenesis [BR:
msam03009
]
Eukaryotic type
90S particles
Helicases
119911757 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
Flavi_DEAD
AAA_29
nSTAND3
AAA_25
DUF3915
Motif
Other DBs
NCBI-GeneID:
119911757
NCBI-ProteinID:
XP_038586591
LinkDB
All DBs
Position
Unknown
AA seq
754 aa
AA seq
DB search
MSKRHRLESGDDYSSSKKKPCDGRDRGRDRDRDEQSRDRDREGDRGRDAKSSGLPSIPAA
GGGFPKPTPFQQQINPFTNLPHTPRYYEILKKRLQLPVWEYRESFTSILMRNQSFVLVGE
TGSGKTTQIPQWCVDMVRSMPGPKRAVACTQPRRVAAMSVAQRVADEMDIMLGQEVGYSI
RFEDCSSAKTVLKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVAR
SRSDLKVIIMSATLDAGKFQVYFDHCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQ
IHMCEVDEGDVLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIF
EPPPPNKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAI
SKASAQQRAGRAGRTCPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDD
LVHFDFMDPPAPETLMRALELLNCLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCEF
NCSNEVLSITAMLSVPQCFVRPTEAKKVADESKMRFAHIDGDHMTLLNVYHAFKQNHGAT
QWCYDNFVNYRSLMSADNVRQQLSRIMDRFSLPRRSTEFNSRDYYTNIRRALVTGFFMQI
AHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLMKI
APQYYEMSNFPQCEAKRQLERIITKLSSKEYTQY
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgacatcgtttagagtcgggcgatgactattcgtcgagtaaaaagaaaccc
tgtgatgggcgcgaccgcggcagagaccgagaccgcgatgaacagtcgagggatcgagat
cgagagggcgacagggggcgagacgcgaagtcatccgggttgcccagcatcccagctgcc
ggcggcggcttccctaagccaaccccttttcagcagcagatcaaccccttcaccaacctg
ccccacacaccacgctactatgagatcctgaagaagcggctgcagctgcctgtctgggag
tacagagagagcttcaccagcatcctgatgcgtaaccagtcttttgtgctggtgggagag
acgggctcgggaaagaccacacagatccctcagtggtgcgtggacatggtgcggtcaatg
ccgggaccaaagagggcagtggcctgcacccagcccaggagggtggcggccatgagcgtt
gcccagagggtggctgatgagatggatatcatgctgggccaagaggtgggctactccatc
aggttcgaggactgcagctctgccaagacggtgctcaagtacatgacagatggaatgttg
ctgcgggaggccatgaacgatccactgctggagcgttatggtgtcatcatcctggacgag
gcacacgaacgcacattagctacagatatcctcatgggggtcctcaaggaggtggcccgc
tcgaggtctgaccttaaggtcatcatcatgagcgcgacactcgacgccggaaagttccag
gtgtactttgaccactgcccgctgctgaccatccctggacgcacacaccctgtggagatt
ttctacacaccggaaccggagcgtgactacctggaggcggccatccgcaccgtgatccag
atccacatgtgtgaagtggacgaaggggacgttctgctcttcctcactggacaggaggaa
attgacgaagcctgcaaacgaatcaagagggaggtcgacgacctggggcccgaagtcggc
gatatcaaaatcatcccgctgtactccactttgcctccgcagcagcagcagaggatcttt
gagccacccccacccaataaaccaaatggtgccatcggaaggaaggttgtcgtgtcaaca
aacatcgccgagacgtctctgaccatcgacggcgtggtgtttgtaattgatcccggattt
gccaagcaaaaggtttataaccctcgcatcagagtggaatcccttttggttacagccatc
agcaaggcctcagctcagcagagggcaggtcgtgctggacggacatgcccaggaaagtgt
ttccgcctttacacagagaaagcttacaagacagaaatgcaggacaacacgtatccagag
attctgaggtctaatctgggctctgtggtgctgcagctgaagaaactgggtattgatgac
ctggtgcactttgacttcatggatccaccagccccagagaccctgatgcgagccctggag
ttgctgaactgcctggcagcgctcaatgacgacggtgacctgacggaactgggctccatg
atggcagagttccccctggacccccagctggccaagatggtcatcgccagctgtgaattc
aactgttcaaacgaggtcctctccatcactgccatgttgtcagtcccacagtgcttcgtc
cgacccacggaggctaagaaggtggctgacgagtccaagatgcgctttgcccacatcgat
ggagaccacatgacgctgctcaacgtctaccacgccttcaaacaaaaccacggggctact
cagtggtgctatgacaatttcgtcaactaccgctcgctgatgtcggcagacaatgtacgg
cagcagttgtccaggatcatggaccgcttcagcctgccgaggcggagcactgagtttaac
agcagagactactacaccaacatccggcgagcgctggtcactggcttcttcatgcagatc
gcccacctggagcgcaccggccattatctgacagtgaaggacaaccaagtcgttcagctg
cacccctccaccgtgctggaccacaagccggagtgggtgctttacaacgagttcgtgctc
accaccaagaattacatccgcacgtgcactgacatcaaaccagagtggctgatgaaaatt
gccccgcagtactacgagatgagtaacttcccccagtgtgaagcaaagagacagttggag
cgtatcattacaaaactctcatccaaggaatacactcagtactaa
DBGET
integrated database retrieval system
