Micropterus salmoides (largemouth bass): 119911855
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Entry
119911855 CDS
T07309
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam02010
ABC transporters
msam04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119911855
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119911855
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msam02000
]
119911855
Transporters [BR:
msam02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
119911855
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
R1_ABCA1
AAA_21
AAA_15
AAA_23
Motif
Other DBs
NCBI-GeneID:
119911855
NCBI-ProteinID:
XP_038586751
LinkDB
All DBs
Position
Unknown
AA seq
2243 aa
AA seq
DB search
MGLLTQFTLLLWKNFTLRKRQKVRLVIEVLWPLFLFFILVWVRSNNKPLYKGQCHYPNKA
MPSAGVLPWLQGMMCNINNPCLNYPTPGETPGQVNNFNNSIIAGMLIELQTLLVNRSILS
KARLLADDLDQWASVLPQTNPGNVVLRSILRDNETFSAHLKGNLSVPPAVVQSLMNAEIH
FNPMMGILRPGNLRSIMCEGTALDEYVQFSSQAEKEAFQNVSCLRTPEQLINTQQVLLQN
LDARKVLSKLPSALALNPADAAKLIGKTTQDALPVIEEMARLQNSMIFKAASSLDFQRDM
IGSINMLLCEKQSDFNSTNMTISFRSPRQMANNRSNFIMSNSSDAFCQTLVDTLEGTPGL
RYVWRTFKPLLQGKVLYTPDTPAARLMVKEANSTFNALGMLKELADLWDELGPRVRDFLQ
NSSQVNSVRALLANPLFAAVLNQRLNGTGWTAELLANSLYNGPPEDRPPGMPSYDWRDVY
NTATQTLKLLSNFLGCLDLNKFEAAPTEGHLVRKALELLKNGTYWASVVFENLQPGSSRP
PPYVKYKIRMDIDEAERSNKVKERSWSPGARDNSFNDLRYIWGGFAYLQDMMDHGIIRVQ
TSKTQPLGVYAQQMPYPCFVDDVFVQSIGGILPMFLVLAFMYTVCMTIKGLVLEKELRLK
EVLRAVGIQNIALWSARFTENIVLLTIPCGLISILVKYGKVLQYSDPSVIFVFLLVFCLA
TITQCFFISVFFSKANLAAACGGLIYFVLYLPHILCYAWRDVMGFRAKVAVSLLSCVAFG
YGCENFSKYEEQGIGIQWHNINKSPEEGDRYTFIVSIIMMLFDAAFYWLLTWYIENVFPG
QYGIPKPWYFPFTSSYWRGKPSVTDADPDLLKDSTVHNEYLEKPPPNMTAGVSVRNLVKI
YKTGKKLAVDGLSVDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTALINGYNIQTD
MDSIRKYLGMCPQHNVLFNELTVEEHIYFYARLKGLSRDEVKIEMDQMIKDVGLPHKRKD
LAKNLSGGMQRKLSVAIAFVGGSKIVILDEPTAGVDPYARRGIWELLLKYKQGRTIILST
HHMDEADILGDRIAIISHGKMRCCGSSLFLKKCFGSGYYLTLVRDGTENMTAQSDGILHG
QAKQGKDCPSRRSSLDDGIGSQSWSNSEPSDLTAVGHLVRRHVPEAVFLESIGQEITYIL
PYGGARDGTFALLFQELDLAMADLGLTSYGISDTTLEEIFLKVAEDTGVDAEIPATKELL
VRDCKRSSRESKRNSIASVHIKTVSGMNELKEKFTRKVEDLTKNASVSGKGSTVITGWKL
IRRQFLALFIKRFHNARRSRKGLIAQVVLPAVFVCMSLIFSLIVPPFTEYPSLELQPWMY
GLPQTTFYSNDGPDNAEVSQVVETLVNKPGFGTRCMNGDPIPKLPCSSSGSDWFTPSVDQ
SVTDIFLNGNWSMSNPSPSCQCSTPQRTIMLPDCPLGAGGLPPPQRIQNTTDTLLDLTGR
NMTDFLVKTFEHYGKTRYGGISVGAVNSQVLLTEGAIEVAFSDLKDLFSSFQDNVTDQIF
QKAKTLLKKLGTRDNVKVWFYNQAWHGMVSFISVANNAILRGNLPAGQEPRQYGISVSNH
PLNLTKEQLSYIAMATTSTDVVVSICVIFAMSFIPASFVLFLIQERVTKAKHLQFVSGVN
PAVYWLANFAWDMCNYIIPCLIVIGIFLSFQQKAYVSPANLPALILLLILYGWSITPMMY
PASFIFSVPSTAYVVLTCINLFIGINGSVATFVMELFDDDNVSRINNIVKQVLLIFPHFC
LGRGLIDMAKNQAMATLFSGFGEDRFKDPLSWEMVGKNLFAMVIQGVVMFALTILIQYKF
FCKPRLISGKSLSAEEEDIDVARERKRVYEGKAQNDLLRICDLTKVYSRKSTPAVDRLCV
GVPAAECFGLLGINGAGKTTTFKMLTGDIPVSSGEAFLNGYSIRTEMRDVHQNLGYCPQF
DAIDDLLNGREHLEFYARLRGVPEKEVSMVAEWGIQKLGLVKYSTKSAGTYSGGNKRKLS
TAIALIGCPPVIFLDEPTTGMDPKARRFLWDCILSIIKEGRSVILTSHSMEECEALCTRM
AIMVNGRFMCFGSIQHLKNRFGDGYTVIVRVGGSPPVLTPVEDFMQQNFPGSVLKEKHHN
TLQYQLPYTQGALANIFSQFTIHQHSLGVEDYSVSQTTLDQVFVNFAKHQHGEKDLEAHD
NPVDTSDELPFESVKTSQEAEKV
NT seq
6732 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacgcagttcactctgctcctgtggaagaacttcactctccggaagaga
caaaaggtgcggctggtgattgaagtgctatggcctctgttcctctttttcatactggtg
tgggtgcgttccaacaataagccgctatacaaaggccaatgccattacccaaataaagcc
atgccatcggctggcgtgctgccctggctgcaaggtatgatgtgtaacatcaacaatccc
tgtttgaactatccaacgccgggggagacaccaggccaagtcaacaacttcaacaactcc
ataattgctgggatgttaatagagctgcaaaccctcctggtgaacagatctattctcagc
aaggcgcggttgctggcagatgacctcgaccagtgggcttctgtcctgccacagactaac
cctggcaatgtggtcctgaggagtattttgagagacaatgaaacattctccgctcatctg
aaaggaaatttgtcagtgccaccagcagtggtccaaagcctcatgaatgcagagattcac
tttaatccaatgatgggcatcctgaggcctggcaacctgaggagcatcatgtgtgaaggg
acggctctggatgagtatgtccaatttagcagccaagctgaaaaggaggcttttcagaat
gtcagctgcttgcgcactccagagcagctgatcaacacccagcaagtactcctgcaaaac
ctggatgcgaggaaagtgctttctaagctaccttcagcactggctctgaatccagcagat
gcagcgaagctgattgggaaaaccactcaagatgctttaccagtgattgaggagatggcc
aggttacagaactccatgatctttaaggctgctagttcactggattttcaaagggacatg
attggcagtatcaatatgctactgtgtgaaaagcagtctgacttcaattccaccaatatg
accatcagtttccgctcacctagacagatggctaacaacaggtcaaacttcattatgagc
aacagttctgatgctttttgtcagactctcgttgacaccctggagggcacacctggtctg
cgctatgtttggagaaccttcaagccattactacaagggaaagtcctctatacacctgat
acacctgctgctcgcctcatggtgaaagaggcaaatagcacattcaacgctttgggtatg
ctgaaagagctcgctgatttgtgggatgaactagggccacgtgtccgggatttccttcaa
aatagctctcaagtcaattcagtacgggctctgctggcgaatccattgtttgctgctgtc
ctcaaccagcgtctcaacggcacaggatggactgccgagctgcttgccaactccctatac
aacgggcctccagaagatcgtccacctggcatgccatcctacgactggcgggatgtttac
aacaccgctacccaaaccctaaagcttctctccaacttccttggttgtttagacctgaat
aagtttgaggcagcccccactgaaggccatctggtgaggaaagcactggagcttctgaag
aatggtacgtattgggcaagtgttgtctttgaaaacctccagcctggttccagccgtccc
cctccttatgtcaaatacaaaattcgcatggacatcgatgaggcagagcgtagcaacaaa
gtgaaagagaggtcatggtctcctggggcccgagacaactcctttaacgacctgcgctat
atatggggaggcttcgcctacctgcaggatatgatggaccatggaattatacgagtgcaa
acgtcaaagacccaaccccttggcgtatatgcccagcaaatgccatacccttgcttcgtg
gatgacgtcttcgtccagagtattggaggcatcctgcccatgttcctggttcttgccttc
atgtacactgtgtgcatgaccatcaaaggcctggtgctggagaaagaactgcggctcaag
gaagtgttgcgtgctgtgggcattcaaaacattgccctttggtctgcaaggttcacagag
aacattgttctgctcacaataccctgtggtctcataagtatcttggtcaagtatggcaaa
gtgctgcagtacagcgacccctcagtaatctttgtcttcctgctggtgttctgcctggcc
accatcactcagtgcttcttcattagcgtcttcttctctaaggccaacttagcagcggcg
tgcggcggcctcatctactttgtcctctacctgccgcacatcctttgctacgcctggagg
gacgtcatgggtttccgggccaaggttgcagttagcttattgtcatgcgtggcctttggc
tatggctgcgagaacttttccaagtacgaggagcaaggcatcggtattcagtggcacaac
attaacaagagtccagaagagggagaccgctacaccttcatcgtgtccatcatcatgatg
ctctttgatgctgcgttttactggctgctcacctggtacattgagaatgtctttccaggc
caatacggcatccctaagccatggtacttccctttcacttcatcttattggcgtgggaag
ccctccgtgactgacgctgaccccgacttgctgaaggactccactgtacataacgagtat
ctggagaaaccgccacccaatatgacagctggggtctcagtccgcaatcttgttaaaatc
tacaagactggaaagaagcttgctgtggacgggctgagtgtggacttctacgagaatcaa
atcacatcttttctcggccacaatggagccggaaaaacaaccacaatgtcaattctgaca
ggactgttcccacctacatcaggaacagctctcatcaacggatataacatccagactgac
atggacagcatccgaaagtacttgggaatgtgcccacagcacaatgtcttattcaatgag
ctgacagtggaggagcatatctacttctacgccaggctgaaaggactgagtcgcgatgag
gtgaaaattgagatggaccagatgattaaggatgttggtttaccccataagcgaaaggat
cttgctaagaacctgtcaggtgggatgcagaggaagctgtctgtggctatagcatttgtt
ggtggctcaaaaatcgtcatcttagatgaacctacagcaggagtggacccctatgcccgc
aggggtatctgggaactgctgttaaagtacaaacaaggtcgcaccatcattttgtctaca
caccacatggatgaggcagacatcttaggtgaccgcattgccatcatctcccacggcaag
atgcgttgctgtggctcctcactcttcctgaagaaatgttttggtagcggctactacctc
actctggtccgagacgggactgaaaacatgacagcccagagtgacggcatcttacacggt
caggccaagcagggaaaagattgtccttcgaggagaagcagcctggatgatggcatcggc
agccaaagctggagcaactctgaaccctcagacttgacagctgtgggtcatcttgtgagg
cgccacgtccctgaggcagtcttcttggagagcatcggccaggagatcacctacatactg
ccttacggtggagccagagatgggacctttgccctgctcttccaagagctcgacctggca
atggctgacctcggcctgacgagctacggcatctctgacaccacgctggaggagatattt
ctaaaagtggcagaggataccggagtggatgcagaaataccagcaacaaaggagctgttg
gtgagagactgcaaaagaagctcccgcgaatccaagcgaaacagcattgccagcgtccac
attaaaacagtctctggaatgaatgaattaaaggaaaaattcacacgtaaagtggaagac
ttaacaaagaacgccagtgtcagtgggaagggatccacagtcatcaccggatggaagctg
atcaggaggcagttcctggcactctttatcaagcgcttccacaacgcccgaaggagccgc
aagggactcattgcccaggtggtcctgcctgctgtttttgtgtgcatgtctctgatcttc
tcactcatcgtcccaccgttcactgagtatccgagtctggagctgcaaccctggatgtac
ggtctgcctcaaaccaccttttacagcaacgacgggccagataatgccgaggtgtctcag
gtggtggaaaccttggtgaacaagcctggctttgggacacgctgcatgaatggagaccca
ataccgaagttgccgtgttcttctagtggctctgattggttcactccatccgtggatcag
tccgtcactgacatcttcctcaacgggaactggagcatgtctaacccctccccctcctgt
cagtgcagcactccgcaacggacaataatgttacctgactgtccactcggtgcaggagga
ctccctccgcctcagaggatccagaacacaacagacacactgttggatttaactggaagg
aacatgacggacttcttggtcaagacttttgaacactacggtaaaacaaggtacggaggg
atctctgtcggagcggtcaactcacaagtccttctgactgagggagcaattgaagttgca
ttcagtgatcttaaagacctgttcagttcatttcaggataatgtgactgatcagatcttc
cagaaggctaagacgctgctgaagaagctgggaaccagggacaacgtgaaggtgtggttc
tacaaccaggcctggcacggcatggtgtccttcatcagtgtggccaacaacgccatcctg
aggggaaatctgccggcaggacaggaaccccgccagtacggcatctctgtgtccaatcac
cccctcaacctcaccaaggagcagctctcgtatattgccatggccacaacctctactgat
gtggtggtgtccatctgcgttatctttgccatgtccttcatccctgccagctttgtcctc
ttcctcatccaagagagggtgaccaaagccaagcatctgcaatttgtcagtggagtaaac
ccggctgtctactggttggccaattttgcctgggacatgtgtaactacatcatcccatgt
ttgattgtgattgggatcttcctcagctttcagcaaaaagcctatgtttcacctgctaac
ctgcctgctttgattctgctgcttattctgtatggctggtccatcacccccatgatgtac
cccgcctccttcatcttcagcgtgcccagcacagcctacgtggtgctgacctgcatcaac
ctcttcattggtattaacggcagcgtggccacctttgttatggagctctttgatgatgat
aatgtctcccgcatcaacaacatagtgaagcaggtgctgctgatattcccacatttctgt
ctgggcagagggctaattgacatggctaagaaccaggcaatggccaccctcttcagcggt
tttggagaagaccgttttaaggacccactcagctgggaaatggtgggaaagaaccttttc
gccatggttatccagggagttgtcatgtttgccctcacaattctcatccagtataagttc
ttctgcaaaccaaggcttatttcggggaagtcgttatctgcagaggaagaggatatcgat
gttgcccgggagcgtaagcgggtttatgaaggcaaggcccagaacgaccttctgaggatc
tgtgacctcactaaggtatactctcggaagagcacccctgctgtggacaggctatgtgtg
ggcgtacctgctgcagagtgctttggtttgctcggaatcaacggagctgggaaaaccacc
acgttcaagatgctgacaggagacatcccagtctccagtggagaggccttcctaaatgga
tacagcatacggacagaaatgagagacgtgcaccagaacttgggctactgtccccagttt
gacgctattgatgacctgctgaatgggcgagagcatctggagttttacgccaggttacga
ggggtaccagaaaaagaggtctccatggtggctgagtgggggatccagaagctggggctg
gtcaaatattccaccaagtcagcaggaacctacagcggtgggaacaaacgcaaactttct
acagcgatagccctgatcggttgtcctcctgtgattttcctggatgagccaaccacgggg
atggacccaaaagcccggcgcttcctgtgggactgcatcctgagtatcatcaaagaggga
cgctcagtcattctcacatcacacagtatggaggagtgtgaagcactttgcacacgcatg
gccatcatggtaaacggtcgcttcatgtgcttcggaagcatccagcatctgaagaacagg
tttggtgatggctacacagtgatcgtgagggttggtggctctcctcccgtgttgacgcca
gttgaggacttcatgcagcagaacttcccaggcagcgtcctgaaggagaagcatcacaac
acgctgcagtatcagctcccatacacacagggagctttggccaacatcttcagccagttc
accatccatcagcacagtctgggtgtggaagactactctgtgtctcagaccactctggat
caggtctttgtaaactttgcaaagcaccagcatggggagaaggacctcgaggcccatgac
aacccagtggacacttcagatgagctgccattcgagtctgttaagacctcccaagaagca
gagaaggtgtaa
DBGET
integrated database retrieval system
