Micropterus salmoides (largemouth bass): 119911863
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Entry
119911863 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: multiple PDZ domain protein-like
KO
K06095
multiple PDZ domain protein
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04517
IgSF CAM signaling
msam04519
Cadherin signaling
msam04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119911863
04519 Cadherin signaling
119911863
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
119911863
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
PDZ_4
MPDZ_u10
L27_1
Motif
Other DBs
NCBI-GeneID:
119911863
NCBI-ProteinID:
XP_038586765
LinkDB
All DBs
Position
Unknown
AA seq
2128 aa
AA seq
DB search
MIETMDTQRALQAVERLQAKLKERGEVPTEEKLSLLKSVLQSPLFHQILALQKSVQHIRD
QGSVPVSRGIDLSDHVTAVKPDGSHVSYSNTSAATDDKTSSDEFEHIIHSMAQGRNVTHV
DLQKPASGGLGFSVVGLRSENRGELGIFIQEIQPGSVAHCDGKLKEADQILAINGQPLDQ
TVTHQQAIGILQSASERVQLTVARGPIPQLSSPVVSRTPSAASTLSANSSAWQHVETIEL
VNDGTGLGFGIVGGKTTGVIVKTILPGGIADQDGRLRSGDHILRIGDTDLYGMGSEQVAQ
VLRQCGNRVKLVVTRGPVDENPSVSAIMSVVLPTVTEQQDFEEEEAEAFDVSLTKNTQGL
GITIAGYVGDKNSEPSGIFVKSITKDSAVDQDGRIHVGDQIIAVDGVNIQGYTNQQAVEV
LRHTGQTVHLKLIRRGFRPDDIPPAVAPSVTVLPPSTTIPTTTTVMREIEMERKKAEEAA
QVTADEKPLQTMSEGSDVSPATDQLTEDKHGRKLTPFEEEELMKKWQEILGPSNEVVVAQ
VEKFSENSGLGISLEASSGHHYIRSVLPEGPVGRCGKLFSGDELLEVSGISLIGETHKEV
VRILKELPLCVYMTCCRPAPLLQTDMDAIQPESEAVSTTPDLKKQIDLSSVLVVEESDVN
AAAVTQDNMTEEAIGSPLAMWELEIQNIELEKGEGGLGFSILDYQDPLDPAKTVIVIRSL
VPSGVAEQDGRLLPGDRLMYVNSTNLENASLEDAVQALKGAKLGAVQIGVAKPLPGICGY
SHSPHPYGEQEITSSSTIHSFDFNNILVEEGEEEGLTEGIVYRAEPALIDTSEADLSDEK
VLEHTYSGIEDDTFQTSMIALHGSSCSADLDYLHSSTPKLTARLDLLDEHPCFTDNTQAF
SPEKSAPFTPTSLRGPGLAFDGILSSSDQYLAQHSTNAEPVECSKSYTPFADIGTRSDVP
DKPVEPLHYQKEPPMSFGDIKFLMKDEQPGVRESAEDSDKEVLTSGSNFERTITVVKGNS
SLGMTVSAMKDGLGMLIRSIIHGGSISRDGRLGVGDLILAINGEPTANLTNAQARAMLRR
HSLIGPDLGSTCAPEDDLCPFYVITYVPAEYLEEYKASLEQAKDDVFSETAPVPLPALKD
IPNLPEREDGEGEESASYSNWNQPRKVELFREPGKSLGISIVGGRGMGSRLSNGEVMRGI
FIKHILEDSPAGQNGTLKTGDRIVEVDGVDLRDASHEEAVEAIRRAGNPVPFLVQSIIHR
PRKPPLPFLQLNSHHGSSLRCTNQTFLAPALPQQTSITDSSAERAEAVKRDNKDKGGDSH
SRLFLHLSPTNPFTPTPFKPAKREAAKASPTSAVLLLPVVPHVGETDTDTLTEIPGRPAE
AEEERXEEEEEEDEFGCSWKKIIQRYGSLPGVLHMIELEKGKTGLGLSLAGNRDRSRMSV
FVVGIDPNGAAGRDGRMVVGDELLEINGQVLYGHSHQNASSIIKSSPSKVKIVFVRNTEA
LNQMAVGPVREHEGDTEEPHTELETTAANGDADTSSYVHHIIKLKEDGGLGITFVEGNTE
SGVEIQSISEVKGHTGKEGCMKPGDKLLAVNGESVLGYTVEKVNSLLRKTKGPVKLTFST
NETFPSFSSPQSTCQDRSCSDDVLASLPSIASAATTTTSQTETEAVTSQSRSSTPSTLAC
DPATCPIIPGCETTINISKGRTGLGLSIVGGCDTLLGAIIIHEVYEEGAAAKDGRLWAGD
QILEVNGIDLREASHDEAINVLRQTPQRVQLTVYRDEAQYKEEDLWDSFTVELHKKPGQG
LGLSIVGRRNDSGVFVSDIVKGGLVDTDGQLMQGDQILSVNGEDVRSTTQEAMAALLKCC
VGPIKMEVGRFKAGPFHSERRLSQSSQVSETGSSKVASQSCSDYGNLPDDPDKLSLDSPE
HQDTRTVEFTKGPNDSLGISIAGGVGSPLGDIPIFIAMMNPVGVAAQTQKLKIGDRIVSI
CGTSAEGMSHSQAVTLLKNATGTIQLQVVAGGDTTVTGPPQEQAAGGFTPSCIFQDDLGP
PQYKTITLGRGPDGLGFSIVGGYGSPHGDLPIYVKTVFGKGAAAEDGRLKRGDQIMAVNG
QSLEGVTHEEAVGILKRTKGTVTLTVLS
NT seq
6387 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaacaatggatacacagcgtgccttgcaggcggtggagcgtctccaggccaaa
ctgaaggagcggggggaggtgcccactgaggagaagctcagcctgctcaaatcagtgctc
cagagccccctcttccaccagatcctggccttgcagaagtctgtccagcatatcagagac
cagggcagtgtcccagtgtcacgtgggatcgaccttagcgatcatgtcacagcagtcaag
cccgatggaagccatgtttcctactcaaacacatcagctgctacagatgacaagacatca
tctgatgaatttgaacatattattcactctatggcacaggggcggaacgtgacgcacgta
gacctgcagaagccggcatcgggaggccttggtttcagcgtggtgggcctaaggagcgag
aaccgcggcgagctcggcatcttcatccaggaaattcaaccaggaagtgtggctcactgt
gatgggaagctcaaggaagctgaccagatcttagccattaatgggcagcccctggaccag
acagtgacccatcaacaggctataggcatcctgcagagtgcttcagagagggtgcagctc
acagttgcaagaggaccgatacctcagctgtccagtcctgtggtgtcccgcacgccctct
gctgccagtacactgtcagccaactccagtgcgtggcagcacgtggagacaattgagctg
gtcaacgatggaaccggtcttggctttggtattgtgggaggaaagaccaccggggtgatt
gtcaaaaccatccttcctggaggcatagctgatcaggatggccgcctgcgaagtggggac
cacatcctgcgaattggagacactgacctatacggcatgggcagcgaacaggtggcccag
gtcctaaggcagtgtggcaacagggtgaaactggtggttaccaggggtcctgtggacgag
aatccctctgtctctgctatcatgtctgtggtgctccccactgtcactgagcaacaggac
tttgaggaagaagaagctgaagcatttgatgtgagccttaccaagaacacccagggactg
gggatcactattgctggctatgttggagataaaaattcagagccctctggtatttttgtt
aagagcataacaaaagacagtgccgtagatcaagatggccgtattcatgttggagaccag
ataatagctgtcgatggtgtaaacatccagggctacaccaatcaacaggcagtggaagtg
ctcagacacactggccagacagtccaccttaagctgatccggcggggcttcaggcctgac
gacatcccccccgctgtggcccccagtgtcaccgtcctgcccccgtcgaccaccatccct
accaccaccactgtcatgagggagatagagatggagaggaagaaggctgaggaggctgct
caagtcactgcggatgaaaagccgctccagacaatgagcgaaggatctgatgtcagccca
gccacggatcagctaacagaagacaaacatgggaggaagctaacaccctttgaagaggaa
gaactaatgaagaagtggcaggagattctgggtccaagcaatgaagttgtagtggctcag
gtggagaagtttagtgagaacagtggcctgggcatcagtctagaggccagcagtgggcat
cattacatccgctcagttctacctgagggacctgttggtcgctgtggcaagctgttcagt
ggcgatgaattgcttgaggtcagtggtatatccctaattggtgagacccacaaggaagta
gtcagaatcttgaaggagcttccattatgtgtatatatgacatgctgtaggcccgcccct
ctcctgcagactgacatggatgctatccaaccagagtcagaggctgtgtccacgacacct
gatttaaagaaacaaatagacctgagcagcgtgctggttgttgaagagtcagatgtgaat
gcagcggcagtgacacaggataatatgacagaggaggcgataggatctcctttggctatg
tgggagttggagatccagaatatcgagcttgaaaagggagaagggggattgggattcagc
attctggactaccaggacccactggatcccgccaagacagtgatcgtgattcgctcactg
gttcccagcggtgtggctgagcaggacggcagattgttgccaggagaccgactcatgtat
gttaacagcaccaacctggagaacgccagcctggaggatgctgtccaggccctgaagggg
gccaagcttggcgcggtccagataggagttgcaaaaccactgcctggaatatgtggatat
tcccactctccacacccatatggtgagcaggaaattacatcatcatccaccatccattca
tttgacttcaacaatattttggttgaagaaggagaggaagaaggactgactgagggcatc
gtttaccgagcagagcctgcattgattgacaccagcgaagcagacctgtctgatgaaaag
gtgttagagcatacatactctgggatagaggacgacaccttccagacatccatgattgct
cttcatggtagcagctgtagcgcagacctggattacttgcactcatctacgcccaagctg
acagctcgcctggacttgttggacgagcatccctgctttacagacaacactcaagcgttc
tctccagagaagtctgcccctttcactcctacgagtttgagaggtcccggcctggctttt
gacggcatactaagcagttctgatcagtacctggcacagcactcgaccaatgcagaacca
gtggagtgctcaaagtcatataccccgtttgctgacatagggaccagatctgatgtccca
gacaaacctgtggagcctcttcactatcagaaggagccgcccatgtcttttggagatatc
aagtttttgatgaaggacgagcagcctggtgtgagagaatcagcagaagacagtgacaag
gaagtactgacctcagggagcaattttgaaaggactatcacagttgtcaagggcaactcc
agccttgggatgacagtgagcgccatgaaagatggtttgggaatgctgatccgcagtatt
atccacggtgggtccataagccgtgatggccgtctgggtgttggtgatctcatcctggcc
atcaacggagagcccacagccaacctgaccaatgctcaggctcgtgccatgctgaggaga
cactctctcatcggaccggacctgggatctacttgcgcacccgaggacgatctgtgccca
ttttatgtcattacgtatgttccagcagagtatctggaagagtacaaggccagcctagag
caggctaaagatgatgtcttctccgaaacagctccagtcccacttccagctctaaaagac
attcctaacctccctgaacgggaagatggagagggagaggagagcgcctcttacagcaac
tggaaccaacccaggaaagtggagctcttccgagagccaggcaagtctcttggtatcagt
atcgtcgggggccgagggatgggcagccggctgagcaatggagaggtgatgaggggcatt
tttatcaagcacatcctggaggacagtcctgctggacagaacgggaccctgaagactgga
gacaggatcgtagaggtcgatggagttgacctaagagatgctagtcacgaggaggcagtt
gaggccatacgcagggcaggcaaccctgtccccttcttggtccagagtattatccacagg
cccaggaagccgcccctgccctttctgcagctaaatagccaccacgggtcgagccttcgc
tgcactaatcaaaccttcttagcacctgccctccctcagcagacatcaataacagactcc
agtgcggagagagcagaagctgtgaaaagggacaacaaggacaaggggggtgacagtcac
agtagacttttcctccacctctccccaactaaccctttcactcctaccccgtttaagccg
gcgaagcgtgaggctgcgaaggcatctcccaccagcgctgtcctcctcctgccagtggtg
ccccatgtgggagagactgatacagacacgctgacagagattcctggcagacctgctgag
gcagaggaggagaggnnagaggaggaggaggaggaggatgagtttggatgcagctggaag
aaaataatccagcgctatggcagcctcccaggtgttctacacatgattgagctggagaaa
ggcaagacaggcctgggcctcagcttggccgggaacagggaccgctctcgcatgagtgtg
ttcgtggtgggaatagaccccaacggggcggccggcagggacgggcgcatggtagtgggg
gacgagctgctggagatcaatgggcaagtcctttatggccacagtcaccagaatgcatcc
tccataatcaagagctctccatctaaagtcaaaattgtctttgtcaggaacacggaggcg
ctgaaccagatggctgtgggaccagtgagagaacacgagggagacacagaggagccccac
actgagctagaaacaactgcagctaatggcgatgccgatacttccagttatgtgcatcac
atcataaagctgaaggaggacggaggacttggcatcacctttgtggagggaaacactgag
agtggagttgagattcagagtatatctgaggtgaaaggacatacgggcaaagagggctgc
atgaaaccaggggacaaacttttagctgtgaatggggaatcagtgctaggctacactgtg
gaaaaggtcaattctctactgagaaaaaccaaaggcccagtgaagctaaccttctctaca
aatgagaccttcccctccttctcctctccccagtcaacctgccaggacaggagttgctcg
gatgacgtccttgccagcctacccagcattgctagtgctgccacgacaaccacgagtcaa
acagagacggaagcagtaactagtcagagtcgctcatccaccccttccactctggcctgt
gacccggcgacctgtcccatcatccccggctgtgagaccaccatcaacatctccaagggc
cgcacaggcctgggccttagcatcgtgggaggctgtgacaccctgctgggggccattatt
atccatgaggtttatgaagaaggagcagccgcgaaagatggccggctttgggcaggggac
caaatcctagaggtgaacggtatcgacctgcgtgaagccagtcatgatgaagccatcaat
gtgttgcggcagaccccgcagagagtccagttgacggtctacagggatgaggcccagtac
aaagaggaagacctgtgggactcgtttactgtagagctgcacaagaagcctggccagggc
ctgggcctgagcattgtagggaggaggaatgactcaggagtgtttgtgtccgatattgtg
aaaggaggtttggtggacaccgacggccaactgatgcagggcgaccagatcctgtcagtc
aacggcgaggatgtcaggtcgaccactcaggaggccatggctgcactactcaagtgctgt
gtggggcctataaaaatggaagtggggaggtttaaggcaggcccgttccactctgaacgc
aggctgtctcaaagtagtcaggtgagtgaaacaggcagctccaaggtggcctctcagtca
tgttcagactatggaaatctccctgatgaccctgacaaactaagtctggattctccggag
catcaggacaccagaacagtcgagttcactaaaggtcccaatgattctctgggtatcagc
atagcaggcggcgtgggcagccctctgggcgatatacccatctttattgccatgatgaat
cccgtcggcgtggctgctcagacccagaagctcaagattggggaccgaattgtcagtatc
tgtggaacctctgctgaaggcatgagccactcccaggctgtcactctgctaaagaacgcc
acgggcacaatacagctacaggtggtagcgggcggtgacaccactgtgacgggtccccca
caggagcaggcagccggaggttttacacccagctgtatcttccaggatgacctcggccca
cctcagtataagaccatcactcttggaagaggaccagacggactgggtttcagtatagtc
ggagggtatggcagcccccatggagatttgccgatctatgttaaaacagtgtttggaaag
ggagcagcggccgaggacggccgtctgaagagaggagaccagataatggccgttaacggg
cagagtctggagggtgtcacacatgaagaagctgtcggcatcctgaaaaggaccaaagga
actgtcacactcactgtgctatcataa
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integrated database retrieval system
