Micropterus salmoides (largemouth bass): 119912223
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Entry
119912223 CDS
T07309
Name
(RefSeq) uncharacterized protein LOC119912223
KO
K06252
tenascin
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04510
Focal adhesion
msam04512
ECM-receptor interaction
msam04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119912223
04518 Integrin signaling
119912223
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119912223
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
msam00536
]
119912223
Glycosaminoglycan binding proteins [BR:
msam00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119912223
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lectin_C
fn3
Clec-141-158
DUF7183
Motif
Other DBs
NCBI-GeneID:
119912223
NCBI-ProteinID:
XP_038587246
LinkDB
All DBs
Position
Unknown
AA seq
2434 aa
AA seq
DB search
MWQSYYCTYQLRFVCYNGSVNGTSSFVKVNRTLNWTEAQRYCRENYVDLASIRNQAENDN
ITNLAAGDLLWIGLHWEQLWSDGSTLLFQFWASGQPDSTEQCVTTSFRNSGLWSDDSCSL
TFPFICYSTTPPKTEDFRSIGQNESSITLQWNKVNNNFIFILQFNDAEINITAPDGDGPV
THTVSSLTAATEYTFTLFSVFEDVRSSGVNITAVTAPSKTENFRSIGRDETSITLQWNKV
NNNISFILQFNGAEIDITAPDGDGPVTYTVSSLTAGTTYTFTLFSVFENARSSGVSITAA
TGTRQFYFEATPLNWTEAQSFCRRVYTDLATIRTPIDANAVFRTTRSYRGKAWIGLYGGG
WRWSLSNSSFYGEGETEFRNWAPGHPYSPNGQQNCVVLQSYYYYYYYYYFYDYNGKWLDV
NCNYPFYSVCYNGSVNGTSTFVKVDTPLNWTEAQRYCRENYVDLASIRDQTENDVIRNLA
AGDSVWIGLHSEQLWSDGSTSLFHYWASGQPDSTEQCVTTVFSNSGRWSDDNCSLTFPFI
CYSTTPPKTEDFRSIGQNESSITLQWNKVNNNFSFILQFNDAEINITAPDGDGPVTHTVS
SLTAATEYTFTLFSVFENARSSGVNITAVTAPQNAERFRSTRQDVTSITLQWNKVNNNVS
YILLFNSAEIDITAPDGDGPVTYTVSSLIAGTTYTFTLYSVFENARSSGVSITAVTGTRQ
YYFENTAQNWTEAQSFCRRVYTDLATIETQTDAFAVIWTTPSYRGKAWIGLYGGGWRWSL
SNSSFYGEGETEFRNWAPGHPYSPNGQQNCVVLQSYYYYYYYFYDYNGKWLDINCNYPFY
SVCYNGSVNGTSTFVKVDTPLNWTEAQRYCRENYVDLASIHDQTENDVIRNLAAGDSVWI
GLHLEQLWSDGSTSLFQNWAYGQTDSTEQCVTTVFSNSGLWSDDNCSLTFPFICYSTTPP
KTEDFRSIGQNETSITLQWNKVNNNISFILQFNDAEINITSPDGDGPVTYTVSSLTAATE
YTFTLFSVFEDVRSSGVNITAVTAPSKTENFRSIGRDESSITLQWNKVNNNISFILLFNG
AEIDITAPDGDGPVTYTVSSLTAGTTYTFTLFSVFENVRSSGVSITAVTGTRQFYFEARP
LNWTEAQSFCRRVYTDLATIRTPIDANALLRTTQSYTGKAWIGLYGDSWRWSLNDSSFYN
EGETGFRNWAPGHPYNPYGQQYCVLLQSSYNNDYYFNYYYYYLDYNGKWWDYTCNNQQRF
VCYNGSVNGTSSFVKVNTSLNWTEAQRYCRENYVDLASIRNRAENDIITKLTVGDSVWIG
LHLEQLWSDGSTSLFQNWASGQPDSPEQCVTTAFRNSGRWSDDNCSLSFPFICYSTTLPK
TEDFRSIGQDETSITLQWNKVNNNISFILQFNDAEINITAPDGDGPVTYRVASLTAATEY
TFTLFSVFENARSSGVNITAVTAPSKTENVRSIGRDETSITLQWNKVNNNIRNILQFNGA
EIYITAPDGDGPVTYTVSSLTAGTKYTFTLFSVFENARSSGVSITAVTGTRQFYFEATPL
NWTEAQSFCRRVYTDLATIRTPIDANAVFRTTRSYRGKAWIGLYGDRWRWSLSDSSFYGE
GETGFRNWAPGYPYNPYGQQHCVVLQSFYYYYYYYYSFLDYNGKWLHVHCNNQQRFVCYN
GKVNGTSSFVKVDTPLNWTEAQRYCRENYVDLASIRNRAENYIITKLTAGDNVWIGLYLD
QLWSDGSTSLFQNWAYGQPDSTAQCVTTVFRNSGLWSDDNCSLSFPFICYSITSPKTEDF
RSIGQDETRITLQWNKVNNNFSFILQFNDAEINITAPDGDGPVTHTVSSLTAATEYTFTL
FSVFENVRSSGVNITAVTAPPNAENFISTAQDETSITLQWNKVNNNISFILQFNSAEIDI
TAPDGDGPVTYTVSSLTAATTYTFILFSVYKNARSSGVSVTAVTALVNVASTRQYYFVST
PLNWTEAQSFCRQVYTDLATIENTTDVRAVLRTTPSYTGKAWIGLYDHSWRWSLSDSSFY
GEGETEFRNWAPGHPFNPYGVQLCVVLQNYYYNLNAFGTWVDLNCTNKFFFVCYNGSVNG
TSPFVKINKPLNWTEAQRYCRENYVDLARIQNRTENDIITNLAAGHAVWIGLHWEQLWSD
GSTSLFENWFSGQLQSKKQCVTTTFTYSGQWSDDSCSLTFPFICYSTPSKTENFRSIGQD
ETSITLQWNKVNNNISFILQFNGAEIDLTAPDDDGPVTHTVSSLTAATKYTFTLFSVFEN
VRSSGVNITAVTAPPKAESVISIGQDETSITLQWNKVKNNVNFILQFNDAEINITAPDGD
GPVTHTVSSLTAATTYTFTLYSVFENVRSSGVNFTAVTGPNYVLGTNVELESLTPKLSDS
DLQSVLENLFRRYGLSPQFSFKVLRRVIRKDETK
NT seq
7305 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaatcctactattgcacctaccaattacgctttgtgtgctacaatggttcagta
aatggcacatcctcttttgtaaaggtcaacagaactttgaattggaccgaagctcagaga
tactgcagggagaattacgtcgatctagccagtatacgaaatcaggcagaaaatgacaac
atcacaaacctggcagcaggtgaccttctttggatcggtttgcactgggaacaactgtgg
tctgatgggagcaccttgctgtttcaattttgggccagtgggcaaccagacagcacagag
cagtgtgtcaccacatcattcagaaactcaggactgtggtctgatgacagctgctccctc
actttcccattcatctgttactcaacaactcctccaaaaacagaagacttcagatcaata
ggacaaaatgagtccagtatcactctgcagtggaacaaagtgaacaacaacttcatcttt
attctccagtttaatgatgcagagatcaacatcactgcaccagatggagatggaccagta
actcacacagtctcatctctcactgctgcaactgaatacacattcactctcttctctgtg
tttgaggacgtcagaagcagtggagtaaacattactgcagttaccgctccttcaaaaact
gaaaacttcagatcaataggacgagatgagaccagtatcactctgcagtggaacaaagtg
aacaacaacatcagctttattctccagtttaatggtgcagagattgacatcactgcacca
gatggagatggaccagtaacttacacagtctcatctctcactgctggaactacatacaca
ttcactctcttctctgtgtttgagaacgccagaagcagtggagtgagcattactgcagct
actggaacccgtcagttttactttgaggctacgccactgaactggactgaagctcagagc
ttctgcagacgggtctacactgacctggccaccataagaaccccaattgacgccaatgct
gtattcaggaccacaaggagctacagaggcaaggcttggataggcctctacggtgggggc
tggagatggtccctgagtaacagcagcttctatggtgaaggagagacagagtttagaaac
tgggctcctggacatccctatagtcctaacggacaacagaactgtgtggtgcttcaaagc
tattactattactattactattactacttctatgactacaatggaaagtggttggacgtt
aattgtaactacccattctactctgtgtgctataacggttcagtaaatggaacatcaacc
tttgtaaaagtcgacacacctttgaattggactgaagctcagagatactgcagggagaat
tacgtcgatctagccagtatacgtgatcagaccgaaaatgatgtcatcagaaacctggct
gctggggactctgtgtggatcggtctacactcggaacaactgtggtctgatgggagcacg
tctctgtttcattactgggccagtgggcaaccagacagcacagagcagtgtgtcaccaca
gtgttcagtaactcaggacggtggtcagatgataactgctccctcactttcccgttcatc
tgctactcaacaactcctccaaaaacagaagacttcagatcaataggacaaaatgagtcc
agtatcactctgcagtggaacaaagtgaacaacaacttcagctttattctccagtttaat
gatgcagagatcaacatcactgcaccagatggagatggaccagtaactcacacagtctca
tctctcactgctgcaactgaatacacattcactctcttctctgtgtttgagaacgccaga
agcagtggagtaaacattactgcagttaccgctcctcaaaatgctgaaagattcagatca
acaagacaagatgtcaccagtatcactctacagtggaacaaagtgaacaacaacgtcagc
tatattctcctttttaatagtgcagagatcgatatcactgcaccagatggagatggacca
gtaacttacacagtctcatctctcattgctggaactacatacacattcactctctactct
gtgtttgaaaacgccagaagcagtggagtgagcattactgcagtcactgggactcgtcag
tactactttgagaatacggcacagaactggactgaagctcagagcttctgcagacgggtc
tacactgacctggccaccatagaaacccagactgatgcctttgctgtaatctggaccaca
ccaagctacagaggcaaggcttggataggcctctacggtgggggctggagatggtccctg
agtaacagcagcttctatggtgaaggagagacagagtttagaaactgggctcctggacat
ccctatagtcctaacggacaacagaactgtgtggtgcttcaaagctattactattactat
tactacttctatgactacaatggaaagtggttggacattaattgtaactacccattctac
tctgtgtgctataacggttcagtaaatggaacatcaacctttgtaaaagtcgacacacct
ttgaattggactgaagctcagagatactgcagggagaattacgtcgatctagccagtata
catgatcagaccgaaaatgatgtcatcagaaacctggctgctggggactctgtgtggatc
ggtctacacttggaacaactgtggtctgatgggagcacctctctgtttcaaaactgggcc
tatgggcaaacagacagcacagagcagtgtgtcaccacagtgttcagtaactcaggactg
tggtcagatgataactgctccctcactttcccgttcatctgctactcaacaactcctcca
aaaacagaagacttcagatcaataggacaaaatgagaccagtatcactctgcagtggaac
aaagtgaacaacaacatcagctttattctccagtttaatgatgcagagatcaacatcact
tcaccagatggagatggaccagtaacttacacagtctcatctctcactgctgcaactgaa
tacacattcactctcttctctgtgtttgaggacgtcagaagcagtggagtaaacattact
gcagttaccgctccttcaaaaactgaaaacttcagatcaataggacgagatgagtccagt
atcactctgcagtggaacaaagtgaacaacaacatcagctttattctcctgtttaatggt
gcagagattgacatcactgcaccagatggagatggaccagtaacttacacagtctcatct
ctcactgctggaactacatacacattcactctcttctctgtgtttgagaacgtcagaagc
agtggagtgagcattactgcagttactggaactcgtcagttttactttgaggctaggcca
ctgaactggactgaagctcagagcttctgcagacgggtctacactgacctggccaccata
agaaccccaattgatgccaatgctttacttaggaccacacaaagctacacaggcaaggct
tggataggcctctatggtgacagctggagatggtccctgaatgacagcagcttctacaat
gaaggagagacagggttcagaaactgggctcctggacatccctacaatccttatggacaa
cagtactgtgtgctgcttcaaagctcttacaataacgattactatttcaattactattac
tattacttggactacaatggaaagtggtgggactatacatgcaacaaccaacaaagattt
gtgtgctacaacggttcagtaaatggcacatcatcctttgtaaaagtcaacacttctttg
aattggactgaagctcagagatactgcagggagaattacgtcgatctagccagtatacga
aatcgggcagaaaatgacatcatcacaaagctgacagttggggactctgtgtggatcggt
ctgcacttggaacaactgtggtctgatgggagcacgtctctgtttcaaaactgggccagt
gggcaaccagacagtccagagcagtgtgtcaccacagctttcagaaactctggtcgctgg
tcagatgataactgctccctctctttcccgttcatctgttactcaacaactcttccaaaa
acagaagacttcagatcaataggacaggatgagaccagtatcactctgcagtggaacaaa
gtgaacaacaacatcagctttattctccagtttaatgatgcagagatcaacatcactgca
ccagatggagatggaccagtaacttacagagttgcatctctcactgctgcaactgaatac
acattcactctcttctctgtgtttgagaacgccagaagcagtggagtaaacattactgca
gttaccgctccttcaaaaactgaaaacgtcagatcaataggacgagatgagaccagtatc
actctgcagtggaacaaagtgaacaacaacatcagaaatattctccagtttaatggtgca
gagatctacatcactgcaccagatggagatggaccagtaacttacacagtctcatctctc
actgctggaaccaaatacacattcactctcttctctgtgtttgagaatgccagaagcagt
ggagtgagcattactgcagttactggaacccgtcagttttactttgaggctacgccactg
aactggactgaagctcagagcttctgcagacgggtctacactgacctggccaccataaga
accccaattgacgccaatgctgtattcaggaccacaaggagctacagaggcaaggcttgg
ataggcctctatggtgacagatggagatggtccctgagtgacagcagcttctatggtgaa
ggagagacagggttcagaaactgggctccaggatatccctacaatccttacggacaacaa
cactgtgtggtgcttcaaagcttttactattactattactattactactctttcttggat
tacaatggaaagtggttgcatgttcattgcaacaaccaacaaagatttgtgtgctacaac
ggtaaagtaaatggcacatcatcctttgtaaaagtcgacacacctttgaattggactgaa
gctcagagatactgcagggagaattacgtcgatctagccagtatacgaaatcgggcagaa
aattacatcatcacaaagctgacagctggtgacaatgtgtggatcggtctgtacttggat
caactgtggtctgatgggagcacgtctctgtttcaaaactgggcctatgggcaaccagac
agcacagcacagtgtgtcaccacagtgttcagaaactcaggactgtggtcagatgataac
tgctccctctctttcccgttcatctgctactcaataacttctccaaaaacagaagacttt
agatcaataggacaagatgagaccagaatcactctgcagtggaataaagtgaacaacaac
ttcagctttattctccagtttaatgatgcagagatcaacatcactgcaccagatggagat
ggaccagtaactcacacagtctcatctctcactgctgcaactgaatacacattcactctc
ttctctgtgtttgagaacgtcagaagcagtggagtgaacattactgcagttaccgctcct
ccaaacgcagaaaacttcatatcaacagcacaagatgagaccagtatcactctgcagtgg
aataaagtgaacaacaacatcagctttattctccagtttaatagtgcagagatcgacatc
actgcaccagatggagatggaccagtaacttacacagtctcatctctcactgctgcaact
acatacacattcattctcttctctgtgtataagaacgccagaagcagtggagtgagcgtt
actgcagttactgcactggtcaatgttgcctctactcgtcagtactactttgtgagtacg
ccactgaactggactgaagctcagagcttctgtagacaggtctacactgacctggccacc
atagaaaacacaactgatgtcagggctgtactcaggaccacaccaagctacacaggcaag
gcttggataggcctctatgatcacagctggagatggtccttgagtgacagcagcttctat
ggtgaaggagagacagagtttagaaactgggctcctggacatcccttcaatccttacgga
gtacagctctgtgtggtgcttcaaaactattactataacttaaatgcctttggaacatgg
gtggaccttaattgcaccaacaaattcttttttgtttgctacaatggttcagtaaatggc
acatcaccctttgtaaagatcaataaacctttgaattggactgaagctcagagatactgc
agggagaattatgtcgatctagccagaatacaaaatcgcacagaaaatgacatcatcaca
aacctggcagctgggcatgctgtgtggatcggtctgcactgggaacaactgtggtctgat
gggagcacctctctatttgaaaactggttcagtgggcaactacaaagcaaaaagcagtgt
gtcaccacaacattcacatactcaggacagtggtcagatgatagctgctccctcactttc
ccgttcatctgttactctactccttcaaaaactgaaaacttcagatcaataggacaagat
gagaccagtatcactctgcagtggaataaagtgaacaacaacatcagctttattctccag
tttaatggtgcagagatcgacctcactgcaccagatgatgatggaccagtaactcacaca
gtctcatctctcactgctgcaactaaatacacattcactctcttctctgtgtttgagaac
gtcagaagcagtggagtaaacattactgcagttaccgctcctccaaaagcagaaagcgtc
atatcaataggacaagatgagaccagtatcactctgcagtggaataaagtgaagaacaac
gtgaactttattctccagtttaatgatgcagagatcaacatcactgcaccagatggagat
ggaccagtaactcacacagtctcatctctcactgctgcaactacatacacattcactctc
tactctgtgtttgagaacgtcagaagcagtggagtaaactttactgcagtcactggccca
aattatgttcttggcacaaacgtggaattagaatcattgactcctaagctgtcagactcg
gacttgcagagtgtgttggagaacctctttagaagatacggcctgtcaccacagttttcc
ttcaaagtgttgagacgtgtgatcagaaaagatgagacgaaatga
DBGET
integrated database retrieval system
