Micropterus salmoides (largemouth bass): 119912611
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Entry
119912611 CDS
T07309
Symbol
ptchd1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
msam04990
]
119912611 (ptchd1)
Domain-containing proteins not elsewhere classified [BR:
msam04990
]
Other domain-containing proteins
Patched domain-containing proteins
119912611 (ptchd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
Patched
SelP_N
Motif
Other DBs
NCBI-GeneID:
119912611
NCBI-ProteinID:
XP_038587818
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MLVSAPGLSGRWERLEPRPRARMLRQVLHAGLRTSFHALGRFVASHPVFFASAPVLLSIL
LGASFSRYRVEDDVESLLAPKHSLAKIEGNLVDSLFPVNRSKHALYSDLQTPGRYGRVIV
TSRKGSVLDPIHLDTILKLHRRIYQMQVMVPATGFNSFNYSFSYLCLPDDKNVCIIDDII
RAMEEIQSARASNRSVPVLRYPITQLADGRQAYIGHQLGGVQGWGPSGAVRGPGTGARGE
GVRSARALQLTYYLQARGSLMDRVASQWEKAFCAELQQFAALHPKLGLYPSTSSSLRTDF
QFSSVLARRPLLASLGVCGVLAVLCCSMRDCVRSKPWLGLLALLSITLSGLTAAGILNLT
GATYNSTYLGIPFVMLGHGLFGSFEMLSSWRRTREDQHVKERVASVFEDVMLRFSGSTML
HLMTLGLAASPLTNMEAVRLFCRTAAFAVTIGYVYMLSFYSSCLVFTGYLETGYRHGCFC
RRVPKPDRLDSKPAWYRCLMYTRYQDEAQTTNPPNEVDHSHDHAANPDLTHTHAHTHPHT
ANNIAAHSHSNVANSTHTHPHPLTHSTVNTDPQDSHLLLGCVRRCYGDWITNTYVKPFVV
LLYLVYISFGLMGFLQVTQGSDPSALVAMDTATVLYTRAQQRYFSSYSPVIGFYIYESAP
YWNASVQRDLLEYAKGFQRISWLEAYLNYLSDRNQSTNQPRENFTHTLRNFFLREPQFAH
FADDIIFAERGQGEEPDVAASRIFLVAKTTENKREEMSVLLDTLRRLSLTSRVRFLIFNP
SFVYLDRYAAAVSSPLRHSLLAVLFLLGLSSLAVVDPLVAVWLGLTLLSVQFGVLGFMTL
WGVELDCMSVLCLISALGHSADCNGPLLCGFASGRGESRTRWVRVALERHGVPSLQTLIC
YGAALVPVGSVRSNLTHTLFRCLTLTAGCSALHTLAFLPTLLTFLPPSKTRGHGPEGDGQ
RQEVECVEMNDSTRVVDQITTV
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtcagtgctccggggctttccggtcggtgggagaggctcgagccgcggccgcgc
gctaggatgctgcgccaggtgttgcacgcgggcctgaggacctccttccacgcgctgggt
cggttcgtggcgagccacccggtgttcttcgcctcggcaccggtactcctctccatcctg
ctgggggccagcttcagccggtaccgcgtggaggacgacgtggagagcctgctcgcgccc
aagcacagcctggccaagatagagggcaacctggtggatagcctgttccccgtgaaccgc
tccaagcacgcgctctactctgacctgcaaacaccgggccgctatgggcgcgtgattgtt
accagccgaaagggaagtgtgctggaccctattcatctggacactatattaaagctccac
aggcggatctaccagatgcaggtgatggtcccagccacaggcttcaacagcttcaactac
tccttctcctacctctgtctccccgacgacaagaacgtctgcatcattgacgacatcatc
cgtgccatggaggagatccagtctgctcgcgcctccaaccgatccgtcccagtcctgcgg
tacccaatcacgcagctggcagatggaaggcaggcgtacattggccaccaactgggtggc
gtgcagggctggggtcccagcggggcggtacgtggtccggggacaggagccaggggagaa
ggtgtacgttctgccagggcgttgcagctcacctactacctccaagcccgcggcagcctg
atggaccgggtggccagccaatgggaaaaggccttctgtgctgagttacagcaatttgca
gcgttgcaccctaaactggggctgtacccttccacttcctcttctctgaggacagacttc
cagttctcttcggttctggcacgccgtcccctgttggccagcttgggagtgtgtggtgtg
ctggccgtcctctgctgctctatgagggattgtgtgaggtctaaaccctggttgggtctg
ttggctctgctgtcaataacactgtcaggcctcactgctgctgggatactcaacctgacc
ggggccacctacaactctacgtacctgggaatccctttcgtcatgcttggtcacgggctc
ttcggctcctttgagatgctgtcgtcatggaggcgaactcgggaggaccagcatgtgaag
gagcgtgtggcgagcgtctttgaggacgtcatgctgcggttctccggctccaccatgctc
cacctgatgaccctgggcctggccgcctcgccgctcaccaacatggaggctgtccggctc
ttctgccgcaccgccgcctttgctgtcacaattggctatgtttacatgttgtccttctac
agttcctgtctggtgttcacgggatacttagagaccgggtacagacatggctgcttctgc
cggcgagtccccaaacccgaccggctggactccaaaccggcctggtacaggtgtctaatg
tacactcgttatcaggatgaggctcaaacaaccaacccaccaaacgaggtcgatcacagt
cacgatcacgcagcaaaccctgacctaactcacacacatgcacacacacacccacatacg
gcgaacaacatcgccgcgcattcacacagcaatgtggctaactccacacacacacatcca
catccactcacacattccacggttaacacggaccctcaggactctcaccttttgctgggg
tgtgtgaggcgttgctatggagactggatcactaacacctatgtcaaaccctttgtggtt
ctgctgtatttggtttacatctccttcggactgatgggcttcctgcaggtgacgcagggt
tcagaccccagtgcactggttgccatggacactgcgacagtattgtacactcgtgcacag
cagcgttacttcagctcctactcccccgtcattggattctacatctacgaaagcgccccc
tactggaacgcctcggtgcagcgggacctgcttgaatatgccaaaggcttccagcgaatc
agctggctggaagcttacctgaattacctgtccgatcgcaaccagtccaccaaccagccg
cgggaaaactttacccacacactccgcaacttctttctccgcgagccgcagttcgcccac
ttcgccgatgacatcatatttgcagagcgcggtcagggcgaggagcctgatgtggcggcg
tctcggatcttcctggtggccaagacgacagagaacaagcgcgaggagatgtcagtgctg
ctggacacgctgcgacgcctgtcactgacctcacgtgtccgcttcctaatcttcaacccc
tccttcgtctacttggaccgctacgctgcagcggtcagctcccccctcagacactcactg
ctggcggtgcttttcctgttgggtctgtcctcgctggccgttgtggacccgctggtcgct
gtgtggctgggcctcaccctgctctccgtccagttcggggtgctgggcttcatgacctta
tggggtgtggagctggactgcatgtctgtgttgtgtctgatctcagccttgggacactca
gcagactgcaacggccccctcctctgcggtttcgcctcgggtcggggtgaaagcaggact
cgctgggttagagtggcgttggagagacacggggtcccctctctacagacgctcatctgc
tacggcgccgccctggtgcctgttggctctgtacgttccaacctcacacacacactgttc
cgctgcctcaccctcacggccggctgctcggccctgcacacgcttgcgttcctgcccacc
ctcctcacattcctgcctccctccaagacacgggggcacgggcctgaaggagatggtcag
agacaggaggtggagtgtgttgaaatgaacgacagcactcgagtggtcgaccagatcacc
actgtctga
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