Micropterus salmoides (largemouth bass): 119912767
Help
Entry
119912767 CDS
T07309
Symbol
drosha
Name
(RefSeq) LOW QUALITY PROTEIN: ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119912767 (drosha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119912767 (drosha)
03009 Ribosome biogenesis [BR:
msam03009
]
119912767 (drosha)
03036 Chromosome and associated proteins [BR:
msam03036
]
119912767 (drosha)
Enzymes [BR:
msam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
119912767 (drosha)
Messenger RNA biogenesis [BR:
msam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
119912767 (drosha)
Ribosome biogenesis [BR:
msam03009
]
Eukaryotic type
90S particles
RNase
119912767 (drosha)
Prokaryotic type
rRNA processing factors
119912767 (drosha)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
119912767 (drosha)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Cro
YcaO
Motif
Other DBs
NCBI-GeneID:
119912767
NCBI-ProteinID:
XP_038587973
LinkDB
All DBs
Position
Unknown
AA seq
1359 aa
AA seq
DB search
MSFHQDRGGPRGGIPPGQHGSSQNYRPTNLRPPPPQPPVPLYHYDPQTPPSSGYHGNTGY
MPLHSDFMQYPPPAPSQTPSSLNQCPVRPPFPKPPVRQGFPEPPPNFPPPPLPSSTGGSA
SGSQVSAQNAYHPYMMPPVPPPPLPHPPMPPPIAPXSMSYHPPYSMNYPHPPHPPFPPPT
FSPGYTQNPSSFKPDHSFRHGGQYKYEKPMDNRRSPERGYRHDDHRQKGYGYGSHGEKHK
MDFPGDRKDRGRSPDRRGRPEGGRYRSEYDRGRTPPRHRSRERSRERYRHRESRRSQSPD
RHRKRPRSRSSSRDRKRGRWEEERDRRSESSSGLSRERSYSSVRSRDSEETFADRERERE
RERDRDREKEKEKGDDEKEEDELLKPAWIRCTHAENYYSSDPMDQVGDSTVVGTSKLRDL
YERFEEELGRRQERAKALRPKWDPPKTKLDEDPGGKSCKINDSSSESDCESDGEGSTCSS
SSDSEVFDVIAEIKRKKAHPDRLHEELWYNDPGQMNDGPLCKCSAKARRTGIRHSIYPGE
EPVKQCRTMNNNAGKLFHYRITVSPPTNFLTDRPTVIEYDDHEYLFEGFSLFSHTPLTSI
PLCRVIRFNIDYTIHFIEEMTPENYCVRGLELFASYLFKDILELYDWNLKGPEFDNESSG
CQQFHFMPRFVRFLPDGGKEVLSMHQVLLYLLRSSKPLVPEEEIADMLQWEELEWQKYAE
ECKGMIVTNPGMKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWK
SYVKLRHLLANSPKVKQIDKQKLTQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSD
VCQHAMMLPVLTHHIRYHQCLMHLDKLIGYVFKERCLLQLAMTHPSHHLNFGMNPDHARN
SLSNCGIRQPKYGDRKVHHMYMRKKGINTLINIMSRLGQDDPSPSRINHNERLEFLGDAV
VEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESD
LRHAMANCFEALIGAVYLEGGLEEARQLFGRLLFNSEDLRDVWLNYPSHPLQVQEPQTDR
QLIETSPVLQTLTSFEESIGVLFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQ
LVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEFAITNDKTKRPVALRTK
TLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTE
GKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFP
QMAHQKRFIERKYRQELKEMRRERERQEKETDEVEECRK
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccatcaggatcggggtggtcccagggggggaattcccccaggccagcacggc
tcctctcaaaactaccgacccaccaacctgaggccaccacctccacagcctcctgttccc
ctgtaccactacgatcctcagactcctcccagttcaggctaccatggaaacactggatac
atgcctctgcactctgacttcatgcagtaccctccaccagcaccatcccagacacccagt
tcacttaaccagtgcccagtgcgcccacctttccccaagccccctgtcaggcagggtttc
cctgaacccccgcctaactttccacctcctccccttcccagctccacaggtggttccgct
tcagggtcccaggtgtctgctcagaatgcctaccacccttacatgatgcctcctgtgccc
ccaccaccattaccacacccaccaatgcctccccccatagctcccnagtctatgagctac
caccctccatactccatgaactacccccatcctccccaccctcctttccctcctcccacc
ttcagccctggctacactcagaaccccagctcattcaaaccagaccacagcttcaggcac
ggggggcaatacaagtatgagaagccaatggacaacaggaggtctccagaaagagggtat
cgccacgatgaccacaggcagaagggatacggctacggtagccatggtgaaaagcataaa
atggatttccctggcgacaggaaggatcgtgggaggagtccagacaggcgcggcaggccg
gagggtggacgttacaggtctgagtacgacagaggccggactccccccagacacaggagc
agggaacgtagcagggagaggtatcgtcacagagaaagtcggagatcccagtcacccgac
aggcacagaaagagaccccgaagtcggtcctcaagcagagacaggaaacgtggtcgctgg
gaagaggagagggacagaaggtcggagagctcctccggcctgagcagagagcgcagctac
tcctccgtcaggagcagagactccgaagagacctttgctgaccgagagcgagagagggag
cgagaacgggacagggacagagaaaaggagaaagagaagggggatgatgagaaagaggaa
gatgagcttctgaaacctgcctggatccgctgcacacatgctgagaactactactccagt
gaccccatggaccaagtgggagactctactgtggtcgggaccagtaaactgcgggacctg
tacgagcgctttgaggaagagctggggaggagacaggagagagctaaggctcttcgacct
aaatgggacccgcccaaaaccaaactagatgaggatccaggtgggaagtcctgcaaaatt
aatgacagcagtagtgagtcagactgtgagtcagacggcgaaggaagcacctgctccagc
agctctgactcagaggtttttgatgttattgccgagatcaagagaaagaaagctcatccc
gaccgcctgcatgaggagctgtggtacaatgacccaggacagatgaatgatggtcccttg
tgtaagtgcagtgccaaggccagacgtacagggatccgccacagcatctacccgggggag
gagccagtgaagcagtgtcggacaatgaacaacaatgcagggaaactgtttcactacagg
atcactgtgtctcctcccaccaacttcctgactgacagaccgacagtgatcgagtacgat
gaccacgagtacctgtttgaaggcttctctctcttctcccacacacctctcactagcatt
ccattgtgccgtgtgatccgcttcaacatagattacaccattcacttcatagaggagatg
acaccggagaactactgtgtccgaggcctagagctgtttgcctcctacttgttcaaggac
attcttgagctgtatgactggaacctgaaaggccctgagtttgacaatgagtcgtctgga
tgccagcagttccatttcatgccccgttttgtccgattcttacctgatggcgggaaggag
gtgctgtctatgcatcaggtgctgctctacctgctgcgcagcagcaagcccctggtcccc
gaggaggagattgctgacatgctgcagtgggaggagctggagtggcagaaatacgcggag
gagtgcaagggcatgatcgtcaccaacccaggaatgaaaccgagctcagtgcgtatcgac
caactggacagggagcagttcaacccagacgtcatcaccttccccatcatcgttcatttc
gggatccggcctgctcagctcagctacgccggagaccctcagtaccagaaactgtggaag
agctatgtgaaactacgccacctgctggccaacagccccaaggtcaagcagattgacaag
cagaagctgacgcagagagaggaagctcttcagaagatccgtcagaagaacactatgcgc
cgtgaggtgacagtggagctcagcagtcagggcttctggaagactggcatccgctccgac
gtctgtcagcatgccatgatgctgccagttctcacccatcatatccggtaccaccagtgt
ctgatgcacctggataagctcattggctacgtcttcaaggagcgctgcctccttcagctt
gccatgactcaccccagtcaccacctcaacttcggcatgaatcctgatcacgcccgcaac
tccctttccaactgtggcatccgccagcctaagtacggagacaggaaggtccaccacatg
tacatgaggaaaaagggaatcaacacattgattaacatcatgtctcgtctggggcaggat
gacccctccccttccaggatcaatcacaacgagagacttgagttcctgggtgatgctgtt
gtcgagttcctcaccagtgtccacttgtactacctttttcctagtttggaggagggcggc
cttgccacctacagaacagccattgtacagaaccagcacttagccatgctagccaagaaa
ctggagttagatcgcttcatgctctacgctcacggaccggatctgtgccgggagtcggac
ttgcgacacgccatggccaactgctttgaggcacttatcggtgctgtgtatttggaagga
ggcttggaggaggcccggcagctctttggtagactgcttttcaacagcgaggacctacgg
gatgtctggctcaactacccatcacaccccctgcaggtccaggaacctcagacagacagg
cagctgattgagacgtctccagtcctccagacactgacgagcttcgaggaatctattgga
gttttgttcacacatgtgcgtcttctcgccagagccttcaccttgaggactgtgggcttc
aaccacctcaccttgggccacaaccagaggatggagttcctgggagactctatcatgcag
ctggtggccacagagtacctcttcatccacttccccgaccaccatgaaggacatttaaca
ctactccgcagttcgctggtaaacaaccgcacacaggccaaagtggcagaggagctgggc
atgcaagagttcgccatcaccaacgacaaaaccaaacgaccagtcgcactacggaccaag
actctggctgacttgttggagtctttcattgccgctctctacattgataaagatctggag
tatgtgcacaccttcatgaatgtctgcttcttcccccgtctgaaggagttcattctgaac
caggactggaatgatccaaagtctcaactgcagcagtgctgtttgaccctgagaactgag
ggcaaggagcctgatatcccgctgtacaagaccctgcagacagtggggccctcacacgcc
cgcacctacacggtcgccgtgtatttcaaaggggagcgaatcggctgtggcaaaggcccg
agtatccaacaggcggaaatgggagctgcgatggatgcgctcgaaaaatataacttccca
cagatggctcatcagaagcgcttcatcgagcggaaatacagacaggagctgaaggagatg
agacgagagcgggagcggcaggagaaggagaccgacgaggtggaggaatgcaggaagtga
DBGET
integrated database retrieval system
