Micropterus salmoides (largemouth bass): 119912814
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Entry
119912814 CDS
T07309
Name
(RefSeq) cadherin-20-like isoform X1
KO
K06807
cadherin 20, type 2
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
msam04515
]
119912814
Cell adhesion molecules [BR:
msam04515
]
Cadherins
Major cadherins
119912814
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Cadherin_CELSR2_9th
Mal_decarbox_Al
Motif
Other DBs
NCBI-GeneID:
119912814
NCBI-ProteinID:
XP_038587977
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MGDRLYLPAVASALLPVALGILTLLPHSLLGKPAGEENAGSSALLQRVKRGWVWNQFFVL
EEYTGLEPLYIGKLHSDMDKGDGSIKYILTGEGAGTTFTIDDSTGDIHAIQRLDREVKAQ
YILRAQARNRLTDRPLEPESEFIVKIQDINDNEPRFLDGPYQASVPEMSKIGTSVIQLTA
TDADDPTYGNSARVVYSILEGQPYFSVDAKTGVVRVSLADMDRETRENYTVVIQAKDMGG
QLGGLAGTTTVNITLSDINDNPPMFDQRLYQMSVPESAPVGSVVGRIWAKDRDIGVNAEM
KYSIIDGDGRDTFDITTDPTNLFGIIIVKKPLNFEGKPSYTLKVEGANTHLDPALRHRGP
FKDVTIVHVSVEDVDEPPLFDLPAYYIELSEDAEIGTVVKTVSARDPDAANNTVRYSIER
SSDPEKFFYIEITSGSLMTVRPLDREEIGWHNITVLAMEMNNPTQISSVSVAVKVLDVND
NPPSLTHYLEAYVCENAKAGQLIQTVTAVDPDEPLGGQHFYYSLSPEVANNPNFTLRDNQ
DNTAWILTRRGGWSQQDQTVFYLPIFISDGEQPVQTSTSTLTIRVCSCDQEGNVMSCNAE
AYSLPASLSRGALIAILACIFVLLVMILLMLSLRTHRKKPYLCDEEENVHENIVRYDDEG
GGEEDTEAFDIAAMWNPREAHHHLGKMRQDMLPEIESLSRYVPQACVMGGGGDSNVHGYV
LAKLLEADMDPCAPPYDSLQTYAYEGEGSVAESLSSLQSGTSSADHEYDYLNDWGPRFKK
LAEMYGVLETNSAPMW
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgggagaccgattgtatcttccagcagttgctagcgccttgctccccgtggcccttggc
atattgacccttcttcctcacagccttttgggtaagcccgcaggggaggaaaacgcaggc
agctcagcactgctccagagggtgaagagaggctgggtgtggaaccagttctttgtcttg
gaggaatacaccggactggaaccactttatattggaaagctccactcagacatggataaa
ggtgacggctccattaagtacatcctgacgggcgagggcgcaggtaccaccttcactatc
gatgacagcaccggggacatccacgccatccaaaggctagaccgggaggtgaaggcccag
tacatccttcgcgcccaggcccgcaaccgcctgacggacaggcctctggagcctgagtcc
gagtttattgtgaagatccaggacatcaatgacaatgagccgaggtttctggatgggccc
taccaagcatctgtacccgaaatgtccaaaataggaacatctgtgatccagctgacggct
acagatgccgacgacccaacgtacggcaacagtgctcgggtggtctacagcatcctggag
ggccagccttatttctcagtggacgccaagactggcgtagtccgtgtgtcccttgcagac
atggaccgggagaccagagaaaactacaccgtggtcatccaggccaaggacatgggcggc
caactgggaggtctcgctggtaccaccactgtcaacatcacactcagtgacatcaatgat
aacccacccatgtttgaccagaggctgtatcagatgagcgtcccagagtctgctcccgtg
ggctcggtggtgggtcgtatctgggcgaaggacagagacatcggggtcaacgctgagatg
aagtacagcatcatcgatggagatggaagggacacctttgacatcaccaccgaccccacc
aacctttttggcatcatcattgtgaaaaagccactgaactttgagggcaagcccagttat
actctgaaagtggagggcgccaacacccacttggaccctgccttacgccaccgtgggccc
ttcaaggatgtcaccatcgtgcatgtgagcgtggaggacgtggacgagcccccgctgttt
gacttgccagcgtactacatcgagctgtcagaggatgctgagatcgggacggtggtgaag
acggtgtcagcgagggatcccgatgctgccaacaacactgtgaggtattccatcgagagg
tccagcgaccccgagaagttcttctacatcgaaatcacttctgggtcgctgatgacagtg
cgtccactggaccgagaggagattggctggcacaacataacagtcctcgccatggagatg
aataaccccacacagatctcgagtgtgtcggtggctgttaaggtcctggacgtgaatgat
aatcctccctcgctgacgcactacttggaggcttatgtgtgtgaaaacgccaaagcaggg
cagctgatccaaactgtgacggcggtggacccagatgagccgctgggcggacaacacttc
tactacagcttatctccggaggtcgccaacaaccccaacttcaccctgagagacaaccaa
gacaacacagcgtggatcctgacgcggcgcggaggctggtcacagcaggaccagaccgtc
ttctacttgcccatcttcatctctgacggcgagcagccggtccagaccagcaccagcact
ctgaccatccgcgtgtgcagttgtgaccaggagggcaacgtcatgtcgtgcaacgccgag
gcgtacagcctgcccgcaagcctcagcagaggagcactcatcgccatcctggcctgcatc
tttgtcctgctggtgatgattctactcatgctttccctgcgcacccatcgtaagaagccc
tacctgtgtgacgaggaggaaaatgtccacgagaacattgtgcgctatgacgatgaaggt
ggcggagaggaagacactgaggccttcgatatcgccgcaatgtggaacccacgtgaggcg
caccatcacctgggcaagatgagacaggacatgctgccagagattgaaagcctgtcacgt
tacgtccctcaggcgtgcgtcatgggcggtggcggggatagtaacgttcacggatatgtg
ctggcgaagctcctggaggccgacatggacccatgcgccccaccttacgactccctgcaa
acctacgcctacgagggggaaggttcggtcgctgagtcgctcagctcgctccagtcgggg
acatccagtgccgaccatgagtatgactatctcaacgactgggggcctcggtttaaaaaa
ctcgccgagatgtatggcgtactggagacaaacagtgctccaatgtggtag
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