Micropterus salmoides (largemouth bass): 119912988
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Entry
119912988 CDS
T07309
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
msam04054
]
119912988
Pattern recognition receptors [BR:
msam04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
119912988
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_9
LRR_14
LRR_1
ThsB_TIR
LRR_NXF1-5
LRRNT
Motif
Other DBs
NCBI-GeneID:
119912988
NCBI-ProteinID:
XP_038588217
LinkDB
All DBs
Position
Unknown
AA seq
948 aa
AA seq
DB search
MQAMGSWSLFLVYLLSCLLHYNPLLAFSLKNCTLAHSENAKRLWVTCTARDLTAIPDDIP
RNATSLDLSSNQILNINRTDLRCLSKLIDVLLQYNLISHIDDGAFADLVELRFLIMDDNE
LTNLTDNMFQGLSKLVFLSLYNNKISFISPVSFESLVSIETVYLGANLLQQITDIAPILK
LSTLKGLYLAYNKFDSFQSDDLPLNVSNLEVLQLSMNPLRKFSITTDIFPYLVSLDLSKC
SCDIEWDVANKMFLRSLTSLFFSGMYISFETYRAILQTADSLQKLSLLMMEKPIVEGLID
VACRIPSLRSLDVEVCKIGTMDDDMLRSCSLLNNLTLSHNDLSKLSEHSFRSMTQLRLLA
LDGNHLSKLPLALRGLSTLEILDLSSNFISELDCLDFLNLTRLTNLNLNHNRISKLQGCV
FQNLINLEVLDIGENAFFTFDKTFSVNLWKLESLNLHNNGPLQLMQGDFRNLSSLRVLDL
ESDQHHNVNDGAFEGLDNLQTLSLSLSNFLKEVFRGLPQLANLTLHLTFNWNQKSSQQND
EPPFLKLTNLKKLVLKVYDTFITEISSDLLKGLISLEYLMTERFFMKSLHPDTFKYTPQL
KGLQIIHSDLSDLTPELFWPIPNLQTLDLSNNKFRSLDFLARANLRALSWLKLSENALSI
INETVFQSLPALTYLDLTDNPLTCECSNSGFNQWVQSTNQTQVVNGHQYTCAFPVSQQGN
MFLDFDIESCWIDAGFLCFISSASLTVLTLLTTFIYHFMRWHLVYAYYLFLAFLYDKKRG
KKGTRHHYDAFVSYNVHDEAWVYREMLPVLEGEQGWRLCLHHRDFEPGKPIVENITDAIY
GSRKTICVISRHYLQSEWCSREIQMASYRLFDEQKDVLILLFLEHIPPQQLSAYYQMRSL
VKKRTYLSWPQAVQHTGVFWQSLQRALSSDESATEHTPLLNGHLSSIH
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctatgggaagttggtctctgttccttgtctatcttctgtcttgcctgcttcat
tacaatcccttactggctttttcacttaaaaactgtacgttggcccattctgaaaatgca
aaacgtctgtgggttacttgcacagctcgagacctcactgctattcccgatgacattccc
agaaatgcgacatcactggatctcagctcaaatcaaattttaaacatcaaccggacagat
ttaagatgtttatcaaagctcattgatgtactacttcaatataatctgatttcacacatt
gatgatggagcttttgcagacttggtagaattaaggttccttattatggatgacaatgaa
ctaacaaacctgacagacaacatgtttcaggggctgtccaaattagtcttcctgtctctg
tacaacaacaaaatctcatttatctcccctgtatcctttgagtccctggtcagcatagag
acagtatatctgggtgccaatctgctacaacaaattacagacattgctccaatcttaaaa
ctatcaactttaaagggtttgtatcttgcgtataacaagtttgactcttttcaatcagac
gacctgcctttaaacgtctcaaacctcgaggtactgcagctaagtatgaacccactgaga
aagttcagcattactacagatatatttccttatctggtctctctcgacttgtctaagtgt
agctgtgacattgagtgggatgtagcaaacaagatgtttctgaggagcctaactagtttg
ttctttagtggaatgtatattagctttgagacgtacagagcgatactgcagaccgctgac
tcactacaaaaactttcgctgttgatgatggagaagccgatagttgaaggtctcatagac
gtcgcctgccgaattccttctctcagatctctagatgtagaggtttgcaaaattggtacc
atggacgatgacatgctgaggtcttgttctctgctcaataatctcactttgtcccataat
gacctgtccaagttgtccgagcattcgttcagatcaatgacacagctcaggcttctggca
ctggacggtaaccacttgtctaaactgccactcgcgctccgaggactctccacactggaa
atcttggatctaagctccaacttcatcagtgagcttgactgcctcgacttcctgaatttg
acaagattaacaaaccttaatctcaaccacaatcgtatttcaaaacttcaaggctgtgtt
tttcaaaacttaatcaacttggaagtcctcgatattggagaaaatgcttttttcactttt
gacaagaccttcagcgttaacttgtggaaactagaatctttgaatttgcacaacaatggc
cccttacagctcatgcaaggagactttaggaatctgtcttccctcagggttttggattta
gagtcagaccaacatcacaatgtgaatgacggggctttcgaaggactcgataatctccaa
actcttagtctttctcttagtaatttcctaaaggaggttttcagaggattaccacaatta
gcaaatctgacactacatcttacttttaactggaatcagaagagttctcaacaaaatgac
gagccacctttcttaaagttaaccaatttgaagaagcttgtgcttaaagtttacgacaca
tttataactgagatttcatcagatctgctcaagggtctgatatctttagagtacctcatg
actgagagatttttcatgaagtctttgcacccagacacgtttaaatacactccccaactg
aagggtcttcagataatccacagtgatctgtcagatttaacccctgaactgttctggcca
atcccaaacctgcagacgctcgacctctccaacaataaattcaggtctttagatttcctg
gccagggccaacctgcgggctctcagctggctgaaactcagtgagaatgcattgtccatc
atcaatgagacagtctttcagtccctcccggccttgacatatctggacctgactgataac
cctctgacatgcgaatgctctaattctggttttaaccaatgggtgcagagcaccaaccag
acacaggttgttaatggccaccagtatacttgtgcctttcctgtgagccaacagggaaat
atgttcctggactttgacattgaatcctgttggatagacgccggcttcctctgcttcatt
tctagcgctagtctcactgtgctcactctcctcacaacattcatctaccacttcatgagg
tggcacctagtctacgcctactacctcttcctggccttcctctatgataagaagagggga
aagaagggcactcgtcaccactatgatgcttttgtgtcctacaacgttcacgatgaggcc
tgggtctacagagagatgcttccagtgctggaaggagagcaaggctggaggctgtgtctg
caccacagagacttcgaaccaggtaagcccatcgtagaaaacattacagacgcaatctat
ggcagcaggaagaccatctgtgtgatcagccggcactacctgcagagtgagtggtgctcc
agagagatccagatggccagctaccgtctgtttgacgagcagaaggatgtgttgatcctg
ctgtttttggagcacatccccccccagcagctgtctgcgtactaccaaatgaggagtctg
gtgaagaaacgcacttacctgagctggccgcaagccgttcaacacactggagtcttctgg
cagagcttacagcgagctctgagttcagatgaaagtgccactgagcacacacccctcctc
aatggacacctaagctctattcactga
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