Micropterus salmoides (largemouth bass): 119914060
Help
Entry
119914060 CDS
T07309
Name
(RefSeq) calponin homology domain-containing protein DDB_G0272472-like
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119914060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119914060
Membrane trafficking [BR:
msam04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
119914060
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
119914060
NCBI-ProteinID:
XP_038588975
LinkDB
All DBs
Position
Unknown
AA seq
1249 aa
AA seq
DB search
MSLADQQWCPTSVQVTVLQARGLRIKGKSGTNDAYAVMQVGKEKYQTSVVEKSVAPVWRE
EAAFDLPSLQQGGGGGTERSTLHVHVLHRALVGPDKLLGQAVINLLQLSEDKTRNKTEWF
KLLDKTSKADKDRGEVLVDIQFLRNNMTASMFDLSAAGKSKSRLGKFKDKVRGKKKETDA
ASTGMASFSQVLTDSEEEGNGDDEVPAGKDEKKKKLKMKSLFSPKSNLQKTMSQSMSVLP
AKNSSLSGSQSSGLNVDSSEGKKKFKFMIHKRSGSSDSKESSSGHQKHGAAEQSNLCING
SHVYCEEPQSRTSRIGSNFSLTSSGHGSMEDVPESSPPSVHSLRAVRQYSPWTEEEEETT
EVENIEEDVGELRREEEERIGMEEERRTKEEERVRKQDEELERFTEEKKRQEEEKRAEEE
RVKGEEEERIRRQEEERTQAERRRQEEEERVRREEERERLAEENGRLEEQEMRRIEEEEK
RLREEGERLRMEEEARMRQEEEHKLAEEKRRLEEQEMRRIEEEEKRLREEGERLRMEEEA
RMRQEEEHKLAEEKRRLEEKIEEEKVRQEERAQEERRQEEMVRRQEKELEEKRILEEQER
QRKEEEIIKEKERRQEEEKARRERDEYERLVEEKRKLEEEESKKIEEEEERRRVEEEKRA
KEEEEERVRRQEEEREKLAEQKRILEEQERRRIEDEEKRQRAERISKEEERIRRQEKEEV
ERLAEEERRREEEERVRKENEEMERLAEEKRRLEEQEMKRTEEEERARREEKAERESKEE
QARKLEKEKFVGEKRRENETKHKAAEMKSKVAMESPADVTSTNPFDENLISNNPFEEIHS
SPAGPDSSTAKVPTVRQRCQSAESSVGSKTVSTDEKDLISSQREKRPAPQPPGRNQAERE
SQKEQDGTTPHLAKINKHSKGKDVKTISVLPQRSVQIIAPVSRSPTETKNTQSLPQSSTT
EGTTNVAKHSKRPAPSRPRSVEEGPSSEPKTALSSDGKIFHECGSEAKQQTTVYGLNPFE
DDEDDNELTANDDTTTSGKTGSVQEPPAVSQGADKGAASQTKIKSSKVARAPPLPTTKAA
TSSTLISQNTEESQAETGVMVPDNRITDACVPESISPLHVQESPSAGEEASGKKGGPPTG
SRRLQPVKPLNPLEQQSVSVVGGEKDNKSTGILCGDQQNTKANDTGPKGPYSQLTQEELI
SLVLKQKKQLSERDKKISELEQYIDNLLVRVIEEQPSILMSMNSLKKSA
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgtccctggcggatcagcagtggtgtcccacaagcgtccaggtaacggtactccaagcc
agaggcctcaggataaaagggaaaagcggcacgaacgatgcgtacgcggtcatgcaagtg
ggcaaggagaagtatcagacctcggtggtggagaagagcgtggccccggtgtggagggag
gaggccgctttcgacctgccgtcgctgcaacagggaggaggaggaggcacggagcgctcc
acgctgcatgtccacgtcctacatcgggccctggtgggtccagacaaactgcttggacag
gctgtcatcaacctgctgcagctcagtgaggacaaaacccgcaacaagaccgaatggttt
aagttgctggacaaaactagcaaggcagacaaggacagaggagaggtgcttgtggacatc
cagttcctaagaaacaacatgaccgccagcatgtttgacctttctgctgccggcaaatcg
aaatctcgcctgggaaagttcaaggacaaggttcgtggcaagaaaaaggaaaccgatgct
gcgtctaccgggatggcatccttcagtcaggttctgacagacagcgaggaggagggtaat
ggggacgatgaggtaccagcgggcaaggacgagaaaaagaagaagctcaagatgaagtct
ttgttttctcccaagtctaacctgcagaagaccatgtcccagtccatgtctgttctacct
gccaagaactcctcactgagcggcagccagtcatctggtctaaatgtggattcctctgag
ggtaaaaagaagttcaagttcatgatacataaacgctccggcagctcagacagcaaagag
tcctcctctggtcaccaaaaacatggcgctgcagaacagagtaacttgtgcatcaatggc
agtcatgtatactgcgaagagccgcagtcccggacctctcgcatcggctcaaacttcagt
ctgaccagttcaggccatggatcaatggaagacgtccctgaaagctctcctccatctgtt
cattcactaagggcagtgaggcaatattcaccctggacggaggaggaggaagagacgact
gaagtagaaaatatagaagaggatgttggtgaactaagaagggaggaagaggagaggatt
gggatggaggaggagaggaggacaaaagaagaggagagggttaggaaacaagacgaagag
cttgagaggtttactgaggagaagaaaagacaagaggaagaaaaaagggctgaagaagag
agagttaaaggggaggaagaggaaaggattaggaggcaggaagaagagagaactcaggca
gagaggaggagacaagaggaagaggagagggtaaggagagaagaagaacgtgaaagatta
gcagaggaaaatgggagactagaggaacaagaaatgaggagaattgaggaagaagagaaa
aggctaagagaggaaggggaaaggctcaggatggaggaggaagcgaggatgagacaagaa
gaagagcataaattagcagaggaaaagaggagactagaggaacaagaaatgaggagaatt
gaggaagaagagaaaaggctaagagaggaaggggaaaggctcaggatggaggaggaagcg
aggatgagacaagaagaagagcataaattagcagaggaaaagaggagactggaggaaaaa
attgaagaagagaaagttagacaggaggaaagggcacaggaagagaggagacaagaggag
atggtgagaaggcaagaaaaagagcttgaggaaaagaggatattagaggaacaagaaagg
caaaggaaggaagaggaaataattaaagagaaggaaaggagacaagaggaagagaaggct
aggagagaaagggatgaatatgagagactggtagaggaaaagaggaaactagaggaggaa
gaaagtaaaaagattgaggaagaagaggaaaggagaagggtggaggaggagaagagggca
aaagaggaggaagaggagagggttaggagacaagaagaagagcgtgagaagttggccgag
caaaagaggatactagaagaacaagaaaggaggagaattgaggacgaggaaaaaaggcaa
agggcagaaaggattagtaaagaagaggagaggattaggagacaagaaaaagaagaggtt
gagaggttggctgaggaagagagaagacgagaggaagaggagagggttaggaaggaaaat
gaagaaatggagagattagcagaggagaagaggagactagaggaacaagaaatgaagcgt
actgaggaagaggagagggctaggagggaggagaaagctgaaagggagagtaaagaagag
caggccaggaagctggagaaagagaagtttgtaggagagaagaggagggaaaatgaaacc
aaacacaaagctgcagagatgaaatctaaagtggccatggagagtcctgcagacgtcact
tctactaatccattcgatgaaaatttgatttcaaataatccctttgaggagattcacagc
tcacctgctggacccgacagcagcacagcaaaagtcccaactgtccgacaaaggtgtcaa
tctgccgagtcatcagtgggaagcaaaaccgtttccactgatgaaaaggatcttattagt
tctcaacgtgaaaagcggccggctcctcagcctccaggaaggaatcaagctgagagggag
agtcagaaggagcaggacgggactacaccacatctggcaaaaattaacaagcacagtaaa
ggcaaagatgtcaaaaccatcagcgttctccctcagcgctcagtgcaaattatcgctcct
gtgagtaggtctcccacagaaacaaagaacacccagagcttgccgcaaagtagtaccact
gaaggaacaacaaatgtagccaaacacagtaagcgtcctgcaccatctagacctcgttct
gtggaagaagggccgtcatctgaacccaaaacagccctgtcatctgacggcaaaattttc
catgaatgtggctcagaggcaaaacaacagacaactgtttatggcttaaatccatttgaa
gatgatgaagatgacaatgagctcacagccaatgatgataccacaacctctggtaaaact
ggttcagtacaagagcctccggctgtttcacaaggagccgataaaggcgccgcctctcaa
acaaaaataaaatcctcaaaagtggcccgtgctcccccacttcctacaacgaaagccgcc
acttcgagcactttaatcagccaaaacactgaagaaagccaggcagaaacaggcgtaatg
gtacctgataacaggataaccgacgcatgtgtccctgagtctatcagtcctttgcatgta
caagagtccccgtctgctggagaggaggcaagcgggaagaagggggggcctcctacaggt
tcacgcaggcttcaacctgtaaaaccccttaatcctttggaacagcagtctgtctcagtt
gttggaggggaaaaagataacaaatccacaggaatcctttgtggtgatcagcagaacaca
aaggcaaatgacaccgggccgaaagggccgtactcccagctgactcaggaggaactcatc
tctctggtgcttaaacagaaaaagcagctctcagagagagacaaaaagatatcagagctg
gagcagtacattgacaacttgcttgtgcgtgtcatagaagagcaaccgagtattctcatg
tccatgaactctctgaagaaatctgcctag
DBGET
integrated database retrieval system
