KEGG   Micropterus salmoides (largemouth bass): 119914074
Entry
119914074         CDS       T07309                                 
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 36-like
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    119914074
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:msam03009]
    119914074
Ribosome biogenesis [BR:msam03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    119914074
SSDB
Motif
Pfam: Utp21 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz WD40 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_VPS8 Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_RIG_1st WD40_RFWD3 SGL WD40_like
Other DBs
NCBI-GeneID: 119914074
NCBI-ProteinID: XP_038589001
LinkDB
Position
Unknown
AA seq 967 aa
MKLLHYAAGRQQSANRAETAGQRRRRTAGRNLPVGARCFRPDSVPVRPPCVDCPVRLRVS
GVGQRLGSLVFSVSPRQVPDMPTGGASLFSGFRVLGLYSNHVPHALRYHQKHREFYVVTA
VGQCFHTYNVNRLGIVAVSNSLSDDISCVAADRMLVFAAAGRLISAFARNKEVVMCYHGH
RQEVRLLLPLGDQLISADSGGDVIVWDVQGGDVYLRLQFDPATFDVSAMMHPSTYLNKVL
LGSSQGALQLWNIRTSKLLFTFPGWSAGVTVLQQSPAVDVVGVGTATGRIIIHNIRLDET
LMSFTQDWGPISSLAFRTDGPPIVASGSPQGHIAFWDLERRQLVTQQRQAHRTAIAAATF
LHGEPLLVTNGADNAIKVWIFDQEGGGARLLRSRQGHSAPPTAIRHHGNDGKNILSAGQD
GTLQSFSTVHERFNKNLGHGSINKKKEQKKKKGLSYEELRLPAITAFSSAAARQSDWDGI
VACHRGRLAATTWNYQRCTMGAHHLQPPVTQRNAIATAVDITSCGNFAVIGLSCGRVDVY
NLQSGLHRGCYGDEHNAHSGAVRGVATDTLNQLTLTAGSDWLLKFWRFKSRKQEEQLKLN
AAPASMMLHRDSGMLALALDDFTLLVVDIETRRVVRKFAGHHGNINDMTFSPDGRWLVTV
AMDCTIRTWDLPSGCLVNCFLVAMAPVSVSFSPTGDFLATAHVDSLGVYLWNNKSLCGPV
GLRPLPADYQPVEETLPGVTADVSEQDVTSEEADDAYQSAEQLGAELVTLSLLPESRWKS
LLHLDNIKRRNKPAAPPAAPAAAPFFLPTLPGLTPRFTAPTPTEQETQSKLLSWGLLSQR
SEFSSELESALQSGSFDRSVRLLKDCGPAALSVELTYLTPEGGGASSLLLAFIQMIDSML
AGGRDFDLAHAYLALFLKLHLRSLSQDAVAMAALVRLSSRLETGWAELRTSFDQSLCLLS
YAKSALL
NT seq 2904 nt   +upstreamnt  +downstreamnt
atgaagctacttcattatgccgcagggaggcagcagagcgctaacagggccgagacagcc
gggcaaagaagaagaaggacggcaggtcggaaccttcctgtcggcgctcgttgtttccgg
ccggactcagttcctgtgcggcccccatgtgttgactgtcccgtgcggctccgtgtctcc
ggtgtcggtcagcggctcggttctctcgtgttctccgtcagtcctcggcaggttccggac
atgccgaccggcggcgcttctctgttctccgggttccgggttctggggctttactccaac
cacgtgccgcacgcgctccggtaccaccagaagcaccgggagttctacgtggtgacggcg
gtcggtcagtgtttccacacgtacaacgtgaacagactgggcatcgtcgctgtcagtaac
agcctatcagatgacatcagctgtgtggcagcggacaggatgttggtgttcgccgccgcc
ggacgactcatcagcgccttcgccaggaacaaagaggtggtgatgtgttaccatggacac
agacaggaagtgcgtctgctgcttcctctgggtgatcagctgatctctgctgacagtggt
ggtgatgtcatcgtgtgggacgtccagggaggagatgtgtacctgcggctgcagtttgac
cccgctaccttcgacgtgtcggccatgatgcacccctccacctacctgaacaaggtgctg
ctgggcagctcccagggtgcactgcagctctggaacatcaggaccagtaagttgctgttc
acgttccccggctggtcggcaggcgtcaccgttctgcagcagagtcccgcggtggatgtg
gtcggcgtcggcacggcgacgggtcgcatcatcatccacaacatccgattggacgaaacg
ctgatgagcttcacacaagactggggaccaatcagctcgctcgctttcagaacagacggt
cctcctattgtggcgtccggcagccctcagggccacattgcattctgggatctggagcgc
cgccagctggtcactcagcagagacaggcccacaggacagccatcgccgcggcaaccttc
ctacacggagagccgctattggtcaccaacggagccgacaacgccatcaaggtgtggata
tttgaccaggaggggggcggagccaggttgctgcgcagtcgtcagggccacagtgcccca
cccaccgccatacgtcaccacggtaacgatggaaaaaacatcctcagtgctggtcaggat
gggacgctgcagtctttctccaccgtccacgagcgattcaacaagaacctgggtcatggc
tccatcaacaagaagaaggagcagaagaagaagaagggcttgtcctatgaggaattgcgt
cttcctgccataacagcgttctcctctgctgctgctcgccagtcagactgggacggcatt
gttgcgtgtcatcgcggtcgcctggcagcaaccacttggaactaccagcggtgcaccatg
ggagctcaccatctgcagccgccagtaacgcaaaggaacgccattgctacggctgtcgac
atcacttcctgtggcaactttgctgtgattggtttgtcgtgtggtcgtgtcgacgtctac
aacctgcagtctggcctgcaccgtggttgctacggcgatgagcataatgctcacagcggg
gcggtgcgaggcgttgccacagatactctgaatcagctgacactcacagcaggctctgat
tggctgctcaagttctggcgcttcaagagccggaaacaggaagagcagctaaagctaaac
gctgcgccggctagcatgatgctgcacagagacagcgggatgttagcattagcgctggac
gacttcacactgctggtggtcgacatagaaaccaggcgtgttgtcaggaagtttgccggt
caccacggcaacatcaacgacatgacattcagccctgatggccgctggctggttaccgtg
gcgatggactgcaccattcgtacctgggacctcccctctggatgtctcgtcaactgtttc
ctggttgccatggcgccggtgagcgtgtccttttccccgaccggagacttcctggcgacg
gctcacgttgacagtctgggcgtttacctctggaacaataagagtctgtgtgggcccgtg
gggctccgccccctcccagctgactaccagccagttgaggagacgctgccgggggtcacg
gcggacgtgtcggaacaggacgtgacatcagaggaggctgatgatgcgtaccagtcagcc
gagcagttgggggcggagcttgtgactctatctctgctgccggagtctcggtggaaaagt
ctgctgcacctggacaacatcaagaggaggaataaacctgcagcgccacctgctgctccg
gctgctgcgccgttcttcctgccaacacttcctggtctcacgccgcgattcacggcgccc
acgccaaccgaacaggaaacacagtcgaagctgttgagttggggtttgttgtctcagagg
tcagagttcagttctgaactggaatcagctcttcagtctggatcattcgatcgctcggtg
cgtctcctgaaggattgtgggccagcggcgctctctgtcgagctcacctatctgacacca
gaggggggcggggccagcagcctccttctcgccttcattcaaatgattgacagcatgttg
gccggtgggcgggactttgatctggctcacgcttacctggcgcttttcctgaagctccat
ctccgctcgttatcgcaggatgccgttgccatggctgcgttggtccgcctctcctcccgg
ctggagacggggtgggcggagctacggacatcattcgaccaatcgctgtgtctgctgtcg
tacgccaagagtgcactgctgtga

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