Micropterus salmoides (largemouth bass): 119914108
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Entry
119914108 CDS
T07309
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msam03021
]
119914108 (chd1)
03036 Chromosome and associated proteins [BR:
msam03036
]
119914108 (chd1)
Transcription machinery [BR:
msam03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
119914108 (chd1)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
119914108 (chd1)
SLIK complex
119914108 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
HDA2-3
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
119914108
NCBI-ProteinID:
XP_038589062
LinkDB
All DBs
Position
Unknown
AA seq
1792 aa
AA seq
DB search
MAGRSEDESVSNSSGESSNSDDESGSGSGSASGSDSGSSSSSSSSSSQSGSSDSGSGSDS
GSQSESDTEKFKEKMELPNKSNIDGAEFWKSNPSILAVQRSAMLRKQQQQQQQQQQRQSS
SNSGSDEDSSNSDESDSSSGSKRRRNSGSSGSGSGSGSGSRSDSSADDNSDETASDYEPS
HKIKSRKPPTKMNFRNGKKSSTQRKKAQKCSSSEYEDDDYKKVASAGPRRQATVNISYKE
DEELKTDSDDLVEVVGEDVPQPEEDEFETLERVMDSRIGRKRATGSATTVYAVEADGDPN
ANFNPNKEAGESQYLIKWKNWAHIHNTWETEETLKLQNVKGMKKLDNFKKKEQEKKKWLK
AASPEDIEYFNCQEELMDDLHSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLPYSECSWE
DGALIAKKFQKCIDDYMSRNQSKTIPSRDCKVLKQRPRFMPMKKQPAYIGGDGLELRDYQ
LDSLNWMAHSWCKGNSCILADEMGLGKTIQTISFLNYLFNEHQLYGPFLLVVPLSTLTSW
QREIQLWAPQMNVVVYLGDISSRNMIRTHEWMHVHSKRLKLNILLTTYEILLKDKSFLGS
VNWAFIGVDEAHRLKNDDSLLYKTMMDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKF
HSWELFEEEHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAIQKQY
YKWILTRNYKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKPPEDNEFVNRAEALQQLIR
SSGKLVLLDKLLVRLKERGHRVLIFSQMVRMLDILAEYLRSRQFLFQRLDGSIKGEMRKQ
ALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKR
QVNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQRMDTTGKTVLHTGAAPSSSAPFNKEEL
SAILKFGAVELFKEPEGEEQEPQEMDIDEILKRAETRENDPGPSTVGEELLSQFKVANFS
MMEDEEMDIDSERSHRSWDDIIPEEQRRRMEEEERQKELEEIYLLPRMRNCAKQISFNAS
EGRQSRNRRYSGSDSDSPSDRKRPKKRGRPRTIPRENIKGFSDAEIRRFVKSYKKFGGPL
ERLDAIARDAELVDKSEHDLKRLAETVHNGCVRTLRENPCGPEKTSGGRRGKVKGPTFRI
SGVQVNAKLVISHEEELAPLHKAIPADPEERKKYMIPCHSKAAHFDIEWGKEDDSSLLIG
IYEYGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKDLAKKEAQK
QAGTANSRKRKPRSKKSKTLKPTKTDDVMKSTSSDPPSDKRSDDEDEIEEEKELAPVKAS
SRRGRADRMVVKEEDDEDDYDEEPEEEEEVSSSGEQEVKGKEIKKEVKKEEIWDIRETKE
PKEKKEAKPLEALHKQEESLEKNEVKTEVRERTKKASDVPVHITASGENVPVSEESDELD
QRTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYSNPDQ
IKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQENSQAMEQNTRSINTHGYKHADIER
LKDNSHQDESSRDSCSSDRLLGRYHESSSSVERHSSEYHRKTMGGESRKRPYSSFSNGKD
HRDRDHYRSDSRDRDKQDRYYSDGKHRKLEEFRSSRDHRLDMKDHSHSDHRSSYRYHSDW
QTEQRASVSGPRSPRDQRSPYDSRSPMGHPSPFDYSSDHKSTPEQIWSSRKT
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atggctggacgcagtgaggatgaaagtgtaagcaatagcagtggagagtcaagtaattcc
gatgatgaatctggttctggatcgggctcagcatcagggtccgactcgggctctagttcc
agctcctccagcagcagcagccaatcagggagcagtgactcaggtagtggctcagactct
ggcagccagtcagaatctgacacagagaaattcaaggagaagatggagctgccaaataag
tcaaacattgatggagctgagttctggaagtccaacccaagtatcctagcagtgcaaaga
tctgctatgcttaggaaacagcagcagcaacaacagcagcagcagcagcgacaaagctcc
tcaaatagtggatctgatgaggactcgtcaaatagtgatgaatctgactcatcaagtgga
tccaagagaagaagaaattcaggctcctctggatcgggttctggatctgggagtggttcg
agatcagactcatcagcagatgacaacagtgatgaaacggcatcagactatgagcccagt
cacaaaatcaaaagcagaaagcctccaaccaagatgaattttcggaatgggaagaaaagc
agcacccagaggaagaaagcccagaagtgttcttcttctgagtatgaggatgatgactac
aagaaggtggcgtctgcaggtccacggcggcaggccacagtcaacataagctacaaggag
gacgaggaattgaagactgactcagatgacctggtggaagttgtgggtgaagatgtcccg
cagccggaagaagatgagtttgaaacactggagagagtgatggacagcagaataggaaga
aaaagagcaacaggaagtgcaaccactgtatatgctgtggaagcagacggagaccccaat
gccaacttcaatcccaacaaagaggctggtgaaagtcagtatttgataaagtggaagaac
tgggcccatattcacaacacttgggaaacagaggagacactcaagttgcagaacgtcaag
ggcatgaagaaactggataatttcaagaaaaaggaacaggagaaaaagaaatggttaaag
gcagcttcaccagaggatatagagtatttcaactgtcaggaagaattgatggatgacctg
cactctcagtaccagcttgtagagcgaatcataggacattcaaaccagaagtcagcagct
ggttacccggactacttgtgtaaatggcagggcttaccatactccgagtgtagctgggaa
gatggtgctctgatcgccaaaaagttccagaaatgcattgatgactacatgagcagaaac
cagtcaaagaccattccatccagagactgcaaggtgctgaaacaaagacccaggtttatg
cccatgaagaagcagccagcttacataggaggtgatggactggagctcagagactaccag
ttggacagtttgaactggatggctcactcctggtgcaaaggcaacagttgcatccttgct
gatgaaatgggtttagggaagaccatccagacaatctccttcctcaattacctatttaat
gagcaccaactatatgggccattcttgctggttgtgcctctttctacactaacctcctgg
cagagagaaatccagctctgggcccctcagatgaatgttgtggtctacctgggagacatc
agcagcaggaatatgatcaggacacatgagtggatgcatgtccatagcaagagactgaaa
ttgaacatcctcctcacaacatatgagattcttctcaaagacaagtcatttttgggcagt
gtcaactgggccttcattggtgtggatgaagcacaccgactgaagaatgatgactccctc
ctctacaagaccatgatggatttcaagtccaatcacaggcttctgatcacaggaacgcca
ctgcagaactccctgaaagagctctggtccctgctgcacttcattatgcccgagaagttt
cactcttgggagttgtttgaggaagagcatggtaagggcagggattcgggctacaccagt
ctgcacaaagagctggagccttttctactgcgccgagtcaagaaggatgtggagaaatct
cttcctgccaaagtggagcagattctcagagttgagatgagtgctatccaaaaacagtat
tacaaatggatcctgaccaggaactacaaggctctgagtaaaggtacaaaaggcagcacg
tcgggtttcctgaacatcatgatggagttgaagaagtgttgtaaccactgttaccttatc
aagcccccagaagacaacgaatttgtcaacagagctgaagccttacagcaactgatccgc
agcagtgggaagcttgttctgttggacaaactactggtgcgtttgaaggagcgaggccac
agagttctcatcttctcccagatggtacggatgctggatatcctggctgaatatctgagg
agccgacagttcctctttcagagattagatggctccattaaaggggagatgaggaagcag
gcgttggatcattttaatgctgagggctcagaggatttctgcttcctgttatcaacacgt
gcgggtggtctgggtatcaatctggcatcggctgacacagtagtcatctttgactcagac
tggaacccccagaatgatctgcaggcccaggccagagcccacaggattggacagaaaaga
caggtgaatatctatcgtctggtgacgaagggctcagttgaagaggacatcatcgagagg
gcgaagaaaaaaatggtgctggaccaccttgtcattcagaggatggacaccacagggaaa
actgtgctccatactggtgctgcaccctccagttcagcaccattcaacaaggaggagctg
tctgccattctgaagtttggtgctgtggagcttttcaaagagccagagggtgaggagcag
gagcctcaggaaatggacattgacgagatcctcaaaagagctgagaccagggaaaatgat
cctggaccctccacagtgggagaagaactgctgtctcagttcaaggtggccaacttttcc
atgatggaggatgaagaaatggatattgactctgaacgtagtcatcggagttgggacgat
atcattcctgaggagcagaggaggaggatggaggaggaggagagacagaaagagctggag
gaaatctatttgctgccacgcatgaggaattgtgccaaacagataagctttaatgccagt
gagggccggcagagcaggaacaggaggtattctggatctgacagtgactccccctcagac
cgaaagaggccaaagaaacgaggacggcctagaaccattccacgagaaaatatcaagggc
ttcagcgatgctgagattcggaggtttgtcaaaagttacaaaaaatttggaggaccacta
gaaaggttggatgctattgctcgtgatgctgaacttgtggataagtctgaacatgacctg
aaacgcttggcagagacggttcacaacggctgcgtgagaacactacgagaaaacccttgt
ggaccagagaagacatccggaggcagaagagggaaggtgaaaggccctacattcaggatc
tccggcgtccaggtgaatgccaagcttgttatctcccacgaggaagagctggctccactc
cataaggctattcctgctgaccctgaggagagaaagaagtatatgattccatgccattca
aaggcagcacactttgacattgagtgggggaaggaggacgactccagcctcctcatagga
atctatgagtatggttatggcagctgggagatgatcaagatggacccggacctcaatctc
acacataagctcctaccagatgaccctgacaagaagccacaggccaaacagctacagacc
agagcagactacctcattaagttgctgagcaaggacctggccaaaaaagaagcacagaaa
caagcagggacagccaattcacggaagaggaaaccaagaagtaaaaagagcaaaactctg
aagccaactaagacagacgacgtgatgaagagcacgtcctcagatcccccatcggacaag
aggtcagatgatgaggatgaaattgaggaagaaaaggagttggcaccagtgaaggcatca
agcagaaggggccgagcagacaggatggtggtgaaggaggaggacgacgaagatgactac
gatgaggagcctgaggaggaggaggaggtttcttcatcaggggagcaggaggtcaaagga
aaagagatcaaaaaagaagtcaagaaggaggaaatttgggacattagagagacaaaggag
ccaaaggagaaaaaagaagcaaagccattggaggcactacacaaacaggaggagagcttg
gaaaagaatgaagtcaagactgaggtacgagaacgaacgaagaaagcctctgatgtgcca
gtccatataacagcaagtggagagaacgtgccagtatctgaggagtctgacgaactggac
cagaggaccttcagtgtgtgtaaagagaggatgcggccggtgaaagcagcgctgaagcag
ctggacagaccagagaaagggctgtcggagcgcgagcagctcgaacatacaagacagtgc
ctcataaagattggagaccacatcactgagtgtctgaaggagtattccaatcctgaccag
atcaaacaatggagaaagaacctgtggatatttgtttccaaatttactgagtttgatgcc
aggaaactacataaactatataagcatgcaatcaaaaaaagacaagagaactcccaggca
atggagcagaatactagaagtattaacacccacggctataaacatgcagatattgaacgg
ctgaaggacaactctcaccaggacgagagcagtagggacagttgcagctctgacaggctt
ttaggtcgataccatgagagcagcagcagtgtggagagacacagctcagagtaccacaga
aagactatgggaggagaatctaggaaaagaccttactcatccttcagcaacggcaaagac
caccgggacagggaccactacagatcagacagcagggaccgagacaaacaagacagatac
tacagtgacggtaagcacaggaagctggaggagttccgctccagcagagaccatcgtctg
gacatgaaggatcattcccattcagaccaccgctcttcctaccgctaccactcagactgg
cagacagagcagcgagcctcagtcagtggaccccgctctccccgagaccagcgctcaccc
tatgactcccgctcgcccatgggacacccgtcaccttttgactactcgtcagaccacaag
agcacaccagagcagatctggagcagccgcaagacataa
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integrated database retrieval system
