Micropterus salmoides (largemouth bass): 119914218
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Entry
119914218 CDS
T07309
Name
(RefSeq) DNA repair protein XRCC4-like isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
119914218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msam03400
]
119914218
DNA repair and recombination proteins [BR:
msam03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
119914218
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
XRCC4_C
XLF
CC_CEP250
PH_4
HNOBA
Motif
Other DBs
NCBI-GeneID:
119914218
NCBI-ProteinID:
XP_038589274
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MHNAVREISISSEPDSSYFLQVDWRGRGLDSGFQLLLTDGQDAWRGDVSEAAVCSEAEEL
EMETERYIQDLQQALTETENSNTYSFTLTPSPPDHSAAVTLAYEKVQKDISFRLGSVLLN
AVPEPAKAVRELLILSLQRGNKLERLNQKLEEENQRLRREQQRITAELKRYAGGKEALEA
ELYSRFVLVLNEKKAKIRSLQETHTHLQETRSSEKVGSVKSDRTAGQEEDDYGGSTDEEP
EEVQSTPASALSSLQSSTANPLEDNLKDITDVAPCRKRRFRHLGAPDPAVKKPNTQSSQR
KRTDPPAGSSKEQTPRRSTDAAAASSAAEDLFEDF
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcacaacgcagtgcgtgaaatcagcatctcatcggagcctgactcctcctacttcctg
caggtggactggagggggcggggcttagattcaggcttccagttgctgctgactgatgga
caggatgcctggagaggagacgtgagcgaggcagcagtgtgcagcgaggcggaggagctg
gagatggagacggagaggtacatccaggacctccagcaggcgctgaccgagacagaaaac
tccaacacgtacagcttcaccctgacgccgtctccacccgaccacagcgccgctgtcaca
ctggcgtacgagaaggttcagaaggacatctctttcaggttgggttctgttttgctgaac
gctgtcccagaaccggctaaggccgtgagagagttactgattctcagtctgcagagggga
aataaactggagcgcctcaaccagaaactagaggaggagaaccagagactgagacgagaa
cagcaacgcatcactgcagagctgaagcgctatgctggtggcaaagaagccctggaggca
gagctgtactctcggtttgtcctggtcctgaatgagaagaaggccaagatccgcagtcta
caggaaactcacacacacctacaggaaacaaggagttctgaaaaggtgggttctgtaaaa
tcagaccgaacagccggtcaggaggaggatgactatggaggtagtactgatgaagagcca
gaggaagtgcagtcaactccagcctccgctttatcgtccctgcaatcttctactgcgaat
cctctggaagacaaccttaaggacatcacagacgtggccccctgtcgcaagcgacgcttt
cgtcacctcggagcccccgaccctgcggttaaaaaaccgaacacacagagctcccagaga
aagaggaccgacccccctgcaggatccagtaaggagcagacgccccggcgctcaacagat
gctgcagcagcaagttcagcagcagaggacctgtttgaagacttttga
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